RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 CYB5BO43169 146 aa15.27■□□□□ 0.04
PDLIM2-205ENST00000397761 BRI3O95415 125 aa15.27■□□□□ 0.04
PDLIM2-205ENST00000397761 MT-CO2P00403 227 aa15.27■□□□□ 0.04
PDLIM2-205ENST00000397761 HIST1H1BP16401 226 aaKnown RBP15.27■□□□□ 0.04
PDLIM2-205ENST00000397761 RAB5CP51148 216 aa15.27■□□□□ 0.04
PDLIM2-205ENST00000397761 THAP8Q8NA92 274 aa15.27■□□□□ 0.04
PDLIM2-205ENST00000397761 OR5T1Q8NG75 326 aa15.27■□□□□ 0.04
PDLIM2-205ENST00000397761 OR2T6Q8NHC8 308 aa15.27■□□□□ 0.04
PDLIM2-205ENST00000397761 MRPL36Q9P0J6 103 aaKnown RBP15.27■□□□□ 0.04
PDLIM2-205ENST00000397761 CDC42EP3Q9UKI2 254 aa15.27■□□□□ 0.04
PDLIM2-205ENST00000397761 ANK3Q12955 4377 aaKnown RBP15.27■□□□□ 0.03
PDLIM2-205ENST00000397761 NF1P21359 2839 aa15.27■□□□□ 0.03
PDLIM2-205ENST00000397761 TRBV9A0A0B4J1U6 114 aa15.27■□□□□ 0.03
PDLIM2-205ENST00000397761 AP4M1O00189 453 aa15.27■□□□□ 0.03
PDLIM2-205ENST00000397761 SOX15O60248 233 aa15.27■□□□□ 0.03
PDLIM2-205ENST00000397761 C9orf152Q5JTZ5 239 aa15.27■□□□□ 0.03
PDLIM2-205ENST00000397761 GGTLC1Q9BX51 225 aa15.27■□□□□ 0.03
PDLIM2-205ENST00000397761 CLDN34H7C241 214 aa15.26■□□□□ 0.03
PDLIM2-205ENST00000397761 TRIM77I1YAP6 450 aa15.26■□□□□ 0.03
PDLIM2-205ENST00000397761 PRH1P02810 166 aa15.26■□□□□ 0.03
PDLIM2-205ENST00000397761 RAB14P61106 215 aa15.26■□□□□ 0.03
PDLIM2-205ENST00000397761 RBMS3Q6XE24 437 aaKnown RBP15.26■□□□□ 0.03
PDLIM2-205ENST00000397761 SAT2Q96F10 170 aaPredicted RBP15.26■□□□□ 0.03
PDLIM2-205ENST00000397761 NPFFR1Q9GZQ6 430 aa15.26■□□□□ 0.03
PDLIM2-205ENST00000397761 C17orf112F2Z3M2 114 aa15.25■□□□□ 0.03
PDLIM2-205ENST00000397761 AGPAT2O15120 278 aa15.25■□□□□ 0.03
PDLIM2-205ENST00000397761 PPIFP30405 207 aaKnown RBP15.25■□□□□ 0.03
PDLIM2-205ENST00000397761 CAMLGP49069 296 aa15.25■□□□□ 0.03
PDLIM2-205ENST00000397761 TMEM182Q6ZP80 229 aaPredicted RBP15.25■□□□□ 0.03
PDLIM2-205ENST00000397761 ZNF709Q8N972 641 aa15.25■□□□□ 0.03
PDLIM2-205ENST00000397761 KCNIP2Q9NS61 270 aa15.25■□□□□ 0.03
PDLIM2-205ENST00000397761 TNFRSF19Q9NS68 423 aa15.25■□□□□ 0.03
PDLIM2-205ENST00000397761 THYN1Q9P016 225 aa15.25■□□□□ 0.03
PDLIM2-205ENST00000397761 IGKV1D-37A0A075B6S9 117 aa15.24■□□□□ 0.03
PDLIM2-205ENST00000397761 DNAJC9-AS1A6NH13 148 aa15.24■□□□□ 0.03
PDLIM2-205ENST00000397761 SRD5A1P18405 259 aa15.24■□□□□ 0.03
PDLIM2-205ENST00000397761 RND2P52198 227 aa15.24■□□□□ 0.03
PDLIM2-205ENST00000397761 CFHR3Q02985 330 aa15.24■□□□□ 0.03
PDLIM2-205ENST00000397761 RAB31Q13636 194 aa15.24■□□□□ 0.03
PDLIM2-205ENST00000397761 Q8N2B8 174 aa15.24■□□□□ 0.03
PDLIM2-205ENST00000397761 OR4X1Q8NH49 305 aa15.24■□□□□ 0.03
PDLIM2-205ENST00000397761 NPIPB3Q92617 1050 aa15.24■□□□□ 0.03
PDLIM2-205ENST00000397761 ACY3Q96HD9 319 aa15.24■□□□□ 0.03
PDLIM2-205ENST00000397761 PRSS22Q9GZN4 317 aa15.24■□□□□ 0.03
PDLIM2-205ENST00000397761 SLC45A2Q9UMX9 530 aa15.24■□□□□ 0.03
PDLIM2-205ENST00000397761 H3BUA1 57 aa15.23■□□□□ 0.03
PDLIM2-205ENST00000397761 IGHV3-48P01763 117 aa15.23■□□□□ 0.03
PDLIM2-205ENST00000397761 RPL29P47914 159 aaKnown RBP15.23■□□□□ 0.03
PDLIM2-205ENST00000397761 PRR20EP86478 221 aa15.23■□□□□ 0.03
PDLIM2-205ENST00000397761 PRR20CP86479 221 aa15.23■□□□□ 0.03
PDLIM2-205ENST00000397761 PRR20DP86480 221 aa15.23■□□□□ 0.03
PDLIM2-205ENST00000397761 PRR20BP86481 221 aa15.23■□□□□ 0.03
PDLIM2-205ENST00000397761 PRR20AP86496 221 aa15.23■□□□□ 0.03
PDLIM2-205ENST00000397761 ACSM6Q6P461 480 aa15.23■□□□□ 0.03
PDLIM2-205ENST00000397761 DPPA3Q6W0C5 159 aa15.23■□□□□ 0.03
PDLIM2-205ENST00000397761 PCNPQ8WW12 178 aaKnown RBP15.23■□□□□ 0.03
PDLIM2-205ENST00000397761 ZNF702PQ9H963 129 aa15.23■□□□□ 0.03
PDLIM2-205ENST00000397761 NDUFB8O95169 186 aa15.22■□□□□ 0.03
PDLIM2-205ENST00000397761 FCGR2BP31994 310 aaPredicted RBP15.22■□□□□ 0.03
PDLIM2-205ENST00000397761 AKR1C8PQ5T2L2 129 aa15.22■□□□□ 0.03
PDLIM2-205ENST00000397761 VN1R17PQ8TDU5 208 aa15.22■□□□□ 0.03
PDLIM2-205ENST00000397761 ESM1Q9NQ30 184 aa15.22■□□□□ 0.03
PDLIM2-205ENST00000397761 ZNF705EA8MWA4 302 aaPredicted RBP15.21■□□□□ 0.03
PDLIM2-205ENST00000397761 OR2J3O76001 311 aa15.21■□□□□ 0.03
PDLIM2-205ENST00000397761 IGLV1-40P01703 118 aa15.21■□□□□ 0.03
PDLIM2-205ENST00000397761 OR10J1P30954 320 aa15.21■□□□□ 0.03
PDLIM2-205ENST00000397761 NECAP1Q8NC96 275 aa15.21■□□□□ 0.03
PDLIM2-205ENST00000397761 NOL4LQ96MY1 436 aaPredicted RBP15.21■□□□□ 0.03
PDLIM2-205ENST00000397761 TRGV9Q99603 122 aa15.21■□□□□ 0.03
PDLIM2-205ENST00000397761 RPRMQ9NS64 109 aa15.21■□□□□ 0.03
PDLIM2-205ENST00000397761 LINC00527Q9UJ94 153 aa15.21■□□□□ 0.03
PDLIM2-205ENST00000397761 PXMP4Q9Y6I8 212 aa15.21■□□□□ 0.03
PDLIM2-205ENST00000397761 FN1P02751 2386 aaKnown RBP15.21■□□□□ 0.02
PDLIM2-205ENST00000397761 IGHV3-21A0A0B4J1V1 117 aa15.2■□□□□ 0.02
PDLIM2-205ENST00000397761 TCRBV4S1A1TA0A5B7 111 aa15.2■□□□□ 0.02
PDLIM2-205ENST00000397761 LINC00862A6NCI5 91 aa15.2■□□□□ 0.02
PDLIM2-205ENST00000397761 CLN5O75503 358 aa15.2■□□□□ 0.02
PDLIM2-205ENST00000397761 YIF1AO95070 293 aa15.2■□□□□ 0.02
PDLIM2-205ENST00000397761 MBP02144 154 aa15.2■□□□□ 0.02
PDLIM2-205ENST00000397761 LINC00869P0C866 280 aa15.2■□□□□ 0.02
PDLIM2-205ENST00000397761 FHITP49789 147 aa15.2■□□□□ 0.02
PDLIM2-205ENST00000397761 RIPPLY3P57055 190 aa15.2■□□□□ 0.02
PDLIM2-205ENST00000397761 BLOC1S1P78537 153 aa15.2■□□□□ 0.02
PDLIM2-205ENST00000397761 NDUFA5Q16718 116 aa15.2■□□□□ 0.02
PDLIM2-205ENST00000397761 TMEM41BQ5BJD5 291 aa15.2■□□□□ 0.02
PDLIM2-205ENST00000397761 FFAR4Q5NUL3 377 aa15.2■□□□□ 0.02
PDLIM2-205ENST00000397761 MIC13Q5XKP0 118 aa15.2■□□□□ 0.02
PDLIM2-205ENST00000397761 STPG3Q8N7X2 389 aa15.2■□□□□ 0.02
PDLIM2-205ENST00000397761 LYPD6BQ8NI32 183 aa15.2■□□□□ 0.02
PDLIM2-205ENST00000397761 VSIRQ9H7M9 311 aa15.2■□□□□ 0.02
PDLIM2-205ENST00000397761 MED9Q9NWA0 146 aa15.2■□□□□ 0.02
PDLIM2-205ENST00000397761 FBXL7Q9UJT9 491 aa15.2■□□□□ 0.02
PDLIM2-205ENST00000397761 MFSD2BA6NFX1 497 aa15.2■□□□□ 0.02
PDLIM2-205ENST00000397761 F8W735 103 aaPredicted RBP15.2■□□□□ 0.02
PDLIM2-205ENST00000397761 IGLC1P0CG04 106 aa15.2■□□□□ 0.02
PDLIM2-205ENST00000397761 RPL15P61313 204 aaKnown RBP15.2■□□□□ 0.02
PDLIM2-205ENST00000397761 SELENOTP62341 195 aa15.2■□□□□ 0.02
PDLIM2-205ENST00000397761 RHOGP84095 191 aa15.2■□□□□ 0.02
PDLIM2-205ENST00000397761 DUX5Q96PT3 197 aa15.2■□□□□ 0.02
PDLIM2-205ENST00000397761 TXN2Q99757 166 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms