RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 OR1L4Q8NGR5 311 aa13.48□□□□□ -0.25
NUP50-202ENST00000396096 NPIPB3Q92617 1050 aa13.48□□□□□ -0.25
NUP50-202ENST00000396096 LIPFP07098 398 aa13.47□□□□□ -0.25
NUP50-202ENST00000396096 COMPP49747 757 aaPredicted RBP13.47□□□□□ -0.25
NUP50-202ENST00000396096 COA6Q5JTJ3 125 aaKnown RBP13.47□□□□□ -0.25
NUP50-202ENST00000396096 GFI1BQ5VTD9 330 aa13.47□□□□□ -0.25
NUP50-202ENST00000396096 OR10G8Q8NGN5 311 aa13.47□□□□□ -0.25
NUP50-202ENST00000396096 SLC25A2Q9BXI2 301 aa13.47□□□□□ -0.25
NUP50-202ENST00000396096 NIT2Q9NQR4 276 aa13.47□□□□□ -0.25
NUP50-202ENST00000396096 CNTFRP26992 372 aa13.46□□□□□ -0.25
NUP50-202ENST00000396096 DLX1P56177 255 aa13.46□□□□□ -0.25
NUP50-202ENST00000396096 NEU4Q8WWR8 484 aaPredicted RBP13.46□□□□□ -0.25
NUP50-202ENST00000396096 EAF1Q96JC9 268 aaPredicted RBP13.46□□□□□ -0.25
NUP50-202ENST00000396096 GPR61Q9BZJ8 451 aa13.46□□□□□ -0.25
NUP50-202ENST00000396096 NAV3Q8IVL0 2385 aa13.46□□□□□ -0.25
NUP50-202ENST00000396096 ADGRG4Q8IZF6 3080 aa13.46□□□□□ -0.25
NUP50-202ENST00000396096 IGF2RP11717 2491 aa13.46□□□□□ -0.25
NUP50-202ENST00000396096 TRAV9-1A0A075B6T8 112 aa13.46□□□□□ -0.26
NUP50-202ENST00000396096 K7EN84 100 aa13.46□□□□□ -0.26
NUP50-202ENST00000396096 BPIFB3P59826 476 aa13.46□□□□□ -0.26
NUP50-202ENST00000396096 TNXAQ16473 311 aa13.46□□□□□ -0.26
NUP50-202ENST00000396096 CLEC12BQ2HXU8 276 aa13.46□□□□□ -0.26
NUP50-202ENST00000396096 RPEQ96AT9 228 aa13.46□□□□□ -0.26
NUP50-202ENST00000396096 TIMD4Q96H15 378 aa13.46□□□□□ -0.26
NUP50-202ENST00000396096 MRPL36Q9P0J6 103 aaKnown RBP13.46□□□□□ -0.26
NUP50-202ENST00000396096 SMG1Q96Q15 3661 aaKnown RBP13.45□□□□□ -0.26
NUP50-202ENST00000396096 GGTLC3B5MD39 225 aa13.45□□□□□ -0.26
NUP50-202ENST00000396096 C22orf46C9J442 243 aa13.45□□□□□ -0.26
NUP50-202ENST00000396096 COX7A2P2O60397 106 aa13.45□□□□□ -0.26
NUP50-202ENST00000396096 COX7A1P24310 79 aa13.45□□□□□ -0.26
NUP50-202ENST00000396096 MFAP2P55001 183 aa13.45□□□□□ -0.26
NUP50-202ENST00000396096 RPL15P61313 204 aaKnown RBP13.45□□□□□ -0.26
NUP50-202ENST00000396096 PATE2Q6UY27 113 aa13.45□□□□□ -0.26
NUP50-202ENST00000396096 PPP1R27Q86WC6 154 aa13.45□□□□□ -0.26
NUP50-202ENST00000396096 TMEM183AQ8IXX5 376 aa13.45□□□□□ -0.26
NUP50-202ENST00000396096 OR1P1Q8NH06 330 aa13.45□□□□□ -0.26
NUP50-202ENST00000396096 SGMS2Q8NHU3 365 aa13.45□□□□□ -0.26
NUP50-202ENST00000396096 OR51M1Q9H341 326 aa13.45□□□□□ -0.26
NUP50-202ENST00000396096 HELTA6NFD8 242 aa13.44□□□□□ -0.26
NUP50-202ENST00000396096 CORTO00230 105 aa13.44□□□□□ -0.26
NUP50-202ENST00000396096 REG1AP05451 166 aa13.44□□□□□ -0.26
NUP50-202ENST00000396096 CRYBB3P26998 211 aa13.44□□□□□ -0.26
NUP50-202ENST00000396096 MORN5Q5VZ52 161 aa13.44□□□□□ -0.26
NUP50-202ENST00000396096 C10orf113Q5VZT2 155 aa13.44□□□□□ -0.26
NUP50-202ENST00000396096 OR11H6Q8NGC7 330 aa13.44□□□□□ -0.26
NUP50-202ENST00000396096 TRGV9Q99603 122 aa13.44□□□□□ -0.26
NUP50-202ENST00000396096 SPTA1P02549 2419 aa13.44□□□□□ -0.26
NUP50-202ENST00000396096 TEX22C9J3V5 150 aa13.44□□□□□ -0.26
NUP50-202ENST00000396096 OR10J4P0C629 311 aa13.44□□□□□ -0.26
NUP50-202ENST00000396096 PDLIM4P50479 330 aa13.44□□□□□ -0.26
NUP50-202ENST00000396096 ZNF90Q03938 601 aa13.44□□□□□ -0.26
NUP50-202ENST00000396096 TMEM116Q8NCL8 245 aa13.44□□□□□ -0.26
NUP50-202ENST00000396096 OR5AU1Q8NGC0 362 aa13.44□□□□□ -0.26
NUP50-202ENST00000396096 ONECUT1Q9UBC0 465 aa13.44□□□□□ -0.26
NUP50-202ENST00000396096 TRAV5A0A0B4J249 113 aa13.43□□□□□ -0.26
NUP50-202ENST00000396096 M0R1W7 72 aa13.43□□□□□ -0.26
NUP50-202ENST00000396096 GNG4P50150 75 aa13.43□□□□□ -0.26
NUP50-202ENST00000396096 PRB3Q04118 309 aaPredicted RBP13.43□□□□□ -0.26
NUP50-202ENST00000396096 PYY3Q5JQD4 70 aa13.43□□□□□ -0.26
NUP50-202ENST00000396096 TPTE2P1Q5T6R2 138 aa13.43□□□□□ -0.26
NUP50-202ENST00000396096 DTX2Q86UW9 622 aa13.43□□□□□ -0.26
NUP50-202ENST00000396096 SRSF8Q9BRL6 282 aaKnown RBP13.43□□□□□ -0.26
NUP50-202ENST00000396096 GSN-AS1Q9NRJ2 163 aa13.43□□□□□ -0.26
NUP50-202ENST00000396096 ZNF355PQ9NSJ1 428 aa13.43□□□□□ -0.26
NUP50-202ENST00000396096 IL36BQ9NZH7 164 aa13.43□□□□□ -0.26
NUP50-202ENST00000396096 A0A0U1RQK1 487 aa13.42□□□□□ -0.26
NUP50-202ENST00000396096 ZNF320A2RRD8 509 aa13.42□□□□□ -0.26
NUP50-202ENST00000396096 UBE2L3P68036 154 aaKnown RBP13.42□□□□□ -0.26
NUP50-202ENST00000396096 CENPWQ5EE01 88 aa13.42□□□□□ -0.26
NUP50-202ENST00000396096 DNLZQ5SXM8 178 aa13.42□□□□□ -0.26
NUP50-202ENST00000396096 HCP5Q6MZN7 132 aa13.42□□□□□ -0.26
NUP50-202ENST00000396096 OR10D4PQ8NGN7 298 aa13.42□□□□□ -0.26
NUP50-202ENST00000396096 C22orf15Q8WYQ4 148 aa13.42□□□□□ -0.26
NUP50-202ENST00000396096 F11RQ9Y624 299 aaKnown RBP13.42□□□□□ -0.26
NUP50-202ENST00000396096 KALRNO60229 2985 aa13.42□□□□□ -0.26
NUP50-202ENST00000396096 LY6HO94772 140 aa13.42□□□□□ -0.26
NUP50-202ENST00000396096 FABP1P07148 127 aa13.42□□□□□ -0.26
NUP50-202ENST00000396096 HNF1AP20823 631 aa13.42□□□□□ -0.26
NUP50-202ENST00000396096 SUMO1P63165 101 aaKnown RBP13.42□□□□□ -0.26
NUP50-202ENST00000396096 MISP3Q96FF7 219 aa13.42□□□□□ -0.26
NUP50-202ENST00000396096 PAXXQ9BUH6 204 aa13.42□□□□□ -0.26
NUP50-202ENST00000396096 TNFRSF19Q9NS68 423 aa13.42□□□□□ -0.26
NUP50-202ENST00000396096 PLXNB1O43157 2135 aa13.42□□□□□ -0.26
NUP50-202ENST00000396096 IGHV3-48P01763 117 aa13.41□□□□□ -0.26
NUP50-202ENST00000396096 SFTPCP11686 197 aa13.41□□□□□ -0.26
NUP50-202ENST00000396096 HTR1DP28221 377 aa13.41□□□□□ -0.26
NUP50-202ENST00000396096 LDLRAD2Q5SZI1 272 aa13.41□□□□□ -0.26
NUP50-202ENST00000396096 HIST1H2BLQ99880 126 aa13.41□□□□□ -0.26
NUP50-202ENST00000396096 FBXL15Q9H469 300 aa13.41□□□□□ -0.26
NUP50-202ENST00000396096 XKRY2A2RUG3 117 aa13.4□□□□□ -0.26
NUP50-202ENST00000396096 YPEL3P61236 119 aaPredicted RBP13.4□□□□□ -0.26
NUP50-202ENST00000396096 PDZD11Q5EBL8 140 aa13.4□□□□□ -0.26
NUP50-202ENST00000396096 RUSC1-AS1Q66K80 236 aa13.4□□□□□ -0.26
NUP50-202ENST00000396096 STXBP6Q8NFX7 210 aa13.4□□□□□ -0.26
NUP50-202ENST00000396096 SRSF12Q8WXF0 261 aaKnown RBP13.4□□□□□ -0.26
NUP50-202ENST00000396096 IGF2BP2-AS1Q96M15 143 aa13.4□□□□□ -0.26
NUP50-202ENST00000396096 SSBP3Q9BWW4 388 aaPredicted RBP13.4□□□□□ -0.26
NUP50-202ENST00000396096 DPM3Q9P2X0 92 aa13.4□□□□□ -0.26
NUP50-202ENST00000396096 V9GYV3 84 aa13.4□□□□□ -0.26
NUP50-202ENST00000396096 LOC105371242A0A075B767 164 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms