RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 YPEL2Q96QA6 119 aa6.27□□□□□ -1.41
SYNE2-205ENST00000394768 RNF5Q99942 180 aa6.27□□□□□ -1.41
SYNE2-205ENST00000394768 FAM223BA6NKX1 122 aa6.27□□□□□ -1.41
SYNE2-205ENST00000394768 HIGD1CA8MV81 97 aa6.27□□□□□ -1.41
SYNE2-205ENST00000394768 PEAR1Q5VY43 1037 aaPredicted RBP6.27□□□□□ -1.41
SYNE2-205ENST00000394768 FAM223AQ8IWN6 122 aa6.27□□□□□ -1.41
SYNE2-205ENST00000394768 RASL10AQ92737 203 aa6.27□□□□□ -1.41
SYNE2-205ENST00000394768 ERCC8Q13216 396 aa6.27□□□□□ -1.41
SYNE2-205ENST00000394768 ZNF585BQ52M93 769 aa6.27□□□□□ -1.41
SYNE2-205ENST00000394768 PRR13Q9NZ81 148 aa6.27□□□□□ -1.41
SYNE2-205ENST00000394768 LIMS1P48059 325 aa6.26□□□□□ -1.41
SYNE2-205ENST00000394768 FAM90A2PQ658T7 463 aa6.26□□□□□ -1.41
SYNE2-205ENST00000394768 SLC22A18ASQ8N1D0 253 aa6.26□□□□□ -1.41
SYNE2-205ENST00000394768 OR11H7Q8NGC8 314 aa6.26□□□□□ -1.41
SYNE2-205ENST00000394768 MYLKQ15746 1914 aa6.26□□□□□ -1.41
SYNE2-205ENST00000394768 DOCK4Q8N1I0 1966 aa6.26□□□□□ -1.41
SYNE2-205ENST00000394768 NDUFA3O95167 84 aa6.26□□□□□ -1.41
SYNE2-205ENST00000394768 TEX43Q6ZNM6 134 aa6.26□□□□□ -1.41
SYNE2-205ENST00000394768 LAGE3Q14657 143 aa6.26□□□□□ -1.41
SYNE2-205ENST00000394768 SNAI3Q3KNW1 292 aa6.26□□□□□ -1.41
SYNE2-205ENST00000394768 SLC25A45Q8N413 288 aa6.26□□□□□ -1.41
SYNE2-205ENST00000394768 DMRT1Q9Y5R6 373 aa6.26□□□□□ -1.41
SYNE2-205ENST00000394768 ZNF708P17019 499 aa6.26□□□□□ -1.41
SYNE2-205ENST00000394768 IRF3Q14653 427 aa6.26□□□□□ -1.41
SYNE2-205ENST00000394768 GTF3AQ92664 365 aaKnown RBP6.26□□□□□ -1.41
SYNE2-205ENST00000394768 ROS1P08922 2347 aa6.26□□□□□ -1.41
SYNE2-205ENST00000394768 NDUFS8O00217 210 aa6.26□□□□□ -1.41
SYNE2-205ENST00000394768 MSGN1A6NI15 193 aa6.26□□□□□ -1.41
SYNE2-205ENST00000394768 CECR9P0C854 216 aa6.26□□□□□ -1.41
SYNE2-205ENST00000394768 APOC4P55056 127 aa6.26□□□□□ -1.41
SYNE2-205ENST00000394768 TMEM144Q7Z5S9 345 aa6.26□□□□□ -1.41
SYNE2-205ENST00000394768 ZNRF1Q8ND25 227 aa6.26□□□□□ -1.41
SYNE2-205ENST00000394768 SLC25A16P16260 332 aa6.26□□□□□ -1.41
SYNE2-205ENST00000394768 COQ2Q96H96 371 aa6.26□□□□□ -1.41
SYNE2-205ENST00000394768 PILRAQ9UKJ1 303 aa6.26□□□□□ -1.41
SYNE2-205ENST00000394768 CHTOPQ9Y3Y2 248 aaKnown RBP6.26□□□□□ -1.41
SYNE2-205ENST00000394768 A0A087WWC5 75 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 A8MWV9 139 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 NSUN5P1Q3KNT7 163 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 PAX4O43316 350 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 PEBP1P30086 187 aaKnown RBP6.25□□□□□ -1.41
SYNE2-205ENST00000394768 P2RY4P51582 365 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 PPP1R32Q7Z5V6 425 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 TSC2P49815 1807 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 SRD5A1P18405 259 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 NPDC1Q9NQX5 325 aaPredicted RBP6.25□□□□□ -1.41
SYNE2-205ENST00000394768 IGKV1D-42A0A075B6H8 117 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 C5orf66Q9H5L9 145 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 PROB1E7EW31 1015 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 ITGB1BP1O14713 200 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 DUTP33316 252 aaKnown RBP6.25□□□□□ -1.41
SYNE2-205ENST00000394768 NANOS3P60323 173 aaKnown RBP6.25□□□□□ -1.41
SYNE2-205ENST00000394768 DLX4Q92988 240 aaPredicted RBP6.25□□□□□ -1.41
SYNE2-205ENST00000394768 C1QTNF5Q9BXJ0 243 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 IGHV3OR16-10A0A075B7F0 116 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 IGLV1-36A0A0B4J1U3 117 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 TRAV41A0A0B4J266 112 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 EGR4Q05215 589 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 FOXB2Q5VYV0 432 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 DMRTA2Q96SC8 542 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 TM2D1Q9BX74 207 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 LY75O60449 1722 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 EFNA4P52798 201 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 LCN12Q6JVE5 192 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 ADAMTS7Q9UKP4 1686 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 TMEM187Q14656 261 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 SLC25A48Q6ZT89 311 aaKnown RBP6.25□□□□□ -1.41
SYNE2-205ENST00000394768 SPANXCQ9NY87 97 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 TRAV12-3A0A0B4J271 114 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 ZNF561-AS1K7EIQ3 104 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 PSG1P11464 419 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 C21orf62-AS1Q17RA5 79 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 RCHY1Q96PM5 261 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 ZMAT4Q9H898 229 aa6.25□□□□□ -1.41
SYNE2-205ENST00000394768 LOC101059948A0A1B0GTJ6 334 aa6.24□□□□□ -1.41
SYNE2-205ENST00000394768 TMEM249Q2WGJ8 235 aa6.24□□□□□ -1.41
SYNE2-205ENST00000394768 NKAPP1Q8N9T2 125 aa6.24□□□□□ -1.41
SYNE2-205ENST00000394768 LINC00477Q96M19 166 aa6.24□□□□□ -1.41
SYNE2-205ENST00000394768 ANAPC13Q9BS18 74 aa6.24□□□□□ -1.41
SYNE2-205ENST00000394768 SRXN1Q9BYN0 137 aa6.24□□□□□ -1.41
SYNE2-205ENST00000394768 C6orf226Q5I0X4 101 aa6.24□□□□□ -1.41
SYNE2-205ENST00000394768 M0R1W7 72 aa6.24□□□□□ -1.41
SYNE2-205ENST00000394768 IGKV1D-16P01601 117 aa6.24□□□□□ -1.41
SYNE2-205ENST00000394768 IGHV4-39P01824 125 aa6.24□□□□□ -1.41
SYNE2-205ENST00000394768 RPL39P5Q59GN2 51 aa6.24□□□□□ -1.41
SYNE2-205ENST00000394768 C9orf139Q6ZV77 190 aa6.24□□□□□ -1.41
SYNE2-205ENST00000394768 WDYHV1Q96HA8 205 aa6.24□□□□□ -1.41
SYNE2-205ENST00000394768 ERG28Q9UKR5 140 aa6.24□□□□□ -1.41
SYNE2-205ENST00000394768 PRDM13Q9H4Q3 707 aa6.24□□□□□ -1.41
SYNE2-205ENST00000394768 ELF5Q9UKW6 265 aaPredicted RBP6.24□□□□□ -1.41
SYNE2-205ENST00000394768 LAMTOR2Q9Y2Q5 125 aa6.24□□□□□ -1.41
SYNE2-205ENST00000394768 PKDREJQ9NTG1 2253 aa6.24□□□□□ -1.41
SYNE2-205ENST00000394768 TRBV5-7A0A0A0MS05 114 aa6.24□□□□□ -1.41
SYNE2-205ENST00000394768 IGKCP01834 107 aa6.24□□□□□ -1.41
SYNE2-205ENST00000394768 CDCP2Q5VXM1 449 aa6.24□□□□□ -1.41
SYNE2-205ENST00000394768 TRBV5-3A0A0A0MS03 114 aa6.24□□□□□ -1.41
SYNE2-205ENST00000394768 OR9G9P0C7N8 305 aa6.24□□□□□ -1.41
SYNE2-205ENST00000394768 PUSL1Q8N0Z8 303 aaKnown RBP6.24□□□□□ -1.41
SYNE2-205ENST00000394768 OTX1P32242 354 aaPredicted RBP6.24□□□□□ -1.41
SYNE2-205ENST00000394768 GATD1Q8NB37 220 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms