RNA–Protein interactions for RNA: ENST00000394241.3

TGFA-202, Transcript of transforming growth factor alpha, humanhuman

TSL 3

Gene TGFA, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-202ENST00000394241 C2orf50Q96LR7 162 aa12.39□□□□□ -0.43
TGFA-202ENST00000394241 ATP6V0BQ99437 205 aa12.39□□□□□ -0.43
TGFA-202ENST00000394241 ALG5Q9Y673 324 aa12.39□□□□□ -0.43
TGFA-202ENST00000394241 TENM2Q9NT68 2774 aa12.39□□□□□ -0.43
TGFA-202ENST00000394241 RPS10-NUDT3A0A1W2PQS6 291 aa12.38□□□□□ -0.43
TGFA-202ENST00000394241 PPP5D1E7EU14 171 aa12.38□□□□□ -0.43
TGFA-202ENST00000394241 C3orf84H3BNL1 204 aa12.38□□□□□ -0.43
TGFA-202ENST00000394241 GGCTO75223 188 aaKnown RBP12.38□□□□□ -0.43
TGFA-202ENST00000394241 MFAP4P55083 255 aa12.38□□□□□ -0.43
TGFA-202ENST00000394241 KRTAP10-11P60412 298 aa12.38□□□□□ -0.43
TGFA-202ENST00000394241 RPP30P78346 268 aaKnown RBP12.38□□□□□ -0.43
TGFA-202ENST00000394241 OXA1LQ15070 435 aa12.38□□□□□ -0.43
TGFA-202ENST00000394241 Q56UQ5 140 aa12.38□□□□□ -0.43
TGFA-202ENST00000394241 UBAC2Q8NBM4 344 aa12.38□□□□□ -0.43
TGFA-202ENST00000394241 RCC1LQ96I51 464 aaKnown RBP12.38□□□□□ -0.43
TGFA-202ENST00000394241 GAR1Q9NY12 217 aaKnown RBP12.38□□□□□ -0.43
TGFA-202ENST00000394241 OVOL1O14753 267 aa12.37□□□□□ -0.43
TGFA-202ENST00000394241 TGOLN2O43493 480 aa12.37□□□□□ -0.43
TGFA-202ENST00000394241 CLEC3BP05452 202 aa12.37□□□□□ -0.43
TGFA-202ENST00000394241 RAB11AP62491 216 aa12.37□□□□□ -0.43
TGFA-202ENST00000394241 ACSM6Q6P461 480 aa12.37□□□□□ -0.43
TGFA-202ENST00000394241 TMEM170AQ8WVE7 144 aa12.37□□□□□ -0.43
TGFA-202ENST00000394241 DCUN1D4Q92564 292 aa12.37□□□□□ -0.43
TGFA-202ENST00000394241 DLX4Q92988 240 aaPredicted RBP12.37□□□□□ -0.43
TGFA-202ENST00000394241 BSCL2Q96G97 398 aaPredicted RBP12.37□□□□□ -0.43
TGFA-202ENST00000394241 TXN2Q99757 166 aa12.37□□□□□ -0.43
TGFA-202ENST00000394241 MCRIP2Q9BUT9 160 aaKnown RBP12.37□□□□□ -0.43
TGFA-202ENST00000394241 KRTAP17-1Q9BYP8 105 aa12.37□□□□□ -0.43
TGFA-202ENST00000394241 PAIP2BQ9ULR5 123 aaKnown RBP12.37□□□□□ -0.43
TGFA-202ENST00000394241 RCL1Q9Y2P8 373 aaKnown RBP12.37□□□□□ -0.43
TGFA-202ENST00000394241 OR2T8A6NH00 312 aa12.36□□□□□ -0.43
TGFA-202ENST00000394241 C15orf62A8K5M9 175 aa12.36□□□□□ -0.43
TGFA-202ENST00000394241 H3BP45 60 aa12.36□□□□□ -0.43
TGFA-202ENST00000394241 IGHV3-48P01763 117 aa12.36□□□□□ -0.43
TGFA-202ENST00000394241 MBPP02686 304 aaPredicted RBP12.36□□□□□ -0.43
TGFA-202ENST00000394241 IFNA4P05014 189 aa12.36□□□□□ -0.43
TGFA-202ENST00000394241 FCGR2BP31994 310 aaPredicted RBP12.36□□□□□ -0.43
TGFA-202ENST00000394241 NPBWR1P48145 328 aa12.36□□□□□ -0.43
TGFA-202ENST00000394241 SPSB3Q6PJ21 355 aa12.36□□□□□ -0.43
TGFA-202ENST00000394241 RAB40CQ96S21 281 aa12.36□□□□□ -0.43
TGFA-202ENST00000394241 GPR61Q9BZJ8 451 aa12.36□□□□□ -0.43
TGFA-202ENST00000394241 FNDC4Q9H6D8 234 aaPredicted RBP12.36□□□□□ -0.43
TGFA-202ENST00000394241 ZC4H2Q9NQZ6 224 aa12.36□□□□□ -0.43
TGFA-202ENST00000394241 MGAT4CQ9UBM8 478 aa12.36□□□□□ -0.43
TGFA-202ENST00000394241 LSM5Q9Y4Y9 91 aaKnown RBP12.36□□□□□ -0.43
TGFA-202ENST00000394241 U3KQK5 164 aa12.36□□□□□ -0.43
TGFA-202ENST00000394241 F8W735 103 aaPredicted RBP12.35□□□□□ -0.43
TGFA-202ENST00000394241 GNG7O60262 68 aa12.35□□□□□ -0.43
TGFA-202ENST00000394241 SIX6O95475 246 aa12.35□□□□□ -0.43
TGFA-202ENST00000394241 SLC25A4P12235 298 aa12.35□□□□□ -0.43
TGFA-202ENST00000394241 SYNJ2BPP57105 145 aa12.35□□□□□ -0.43
TGFA-202ENST00000394241 S100A10P60903 97 aa12.35□□□□□ -0.43
TGFA-202ENST00000394241 KLF5Q13887 457 aaPredicted RBP12.35□□□□□ -0.43
TGFA-202ENST00000394241 SPANXN5Q5MJ07 72 aa12.35□□□□□ -0.43
TGFA-202ENST00000394241 ETFRF1Q6IPR1 90 aa12.35□□□□□ -0.43
TGFA-202ENST00000394241 PSENENQ9NZ42 101 aa12.35□□□□□ -0.43
TGFA-202ENST00000394241 STRAPQ9Y3F4 350 aaKnown RBP12.35□□□□□ -0.43
TGFA-202ENST00000394241 K7EPK0 472 aa12.34□□□□□ -0.43
TGFA-202ENST00000394241 L7N2F9 121 aa12.34□□□□□ -0.43
TGFA-202ENST00000394241 NUPL2O15504 423 aaKnown RBP12.34□□□□□ -0.43
TGFA-202ENST00000394241 SCGB2A1O75556 95 aa12.34□□□□□ -0.43
TGFA-202ENST00000394241 OR2C1O95371 312 aa12.34□□□□□ -0.43
TGFA-202ENST00000394241 TAS2R30P59541 319 aa12.34□□□□□ -0.43
TGFA-202ENST00000394241 VAMP2P63027 116 aa12.34□□□□□ -0.43
TGFA-202ENST00000394241 CYCSP99999 105 aaKnown RBP12.34□□□□□ -0.43
TGFA-202ENST00000394241 SLC16A13Q7RTY0 426 aa12.34□□□□□ -0.43
TGFA-202ENST00000394241 SMIM8Q96KF7 97 aa12.34□□□□□ -0.43
TGFA-202ENST00000394241 OR4C12Q96R67 309 aa12.34□□□□□ -0.43
TGFA-202ENST00000394241 NMES1Q9C002 83 aa12.34□□□□□ -0.43
TGFA-202ENST00000394241 SEC14L6B5MCN3 397 aa12.33□□□□□ -0.44
TGFA-202ENST00000394241 TSC22D2O75157 780 aa12.33□□□□□ -0.44
TGFA-202ENST00000394241 PVALBP20472 110 aaPredicted RBP12.33□□□□□ -0.44
TGFA-202ENST00000394241 RELQ04864 619 aaPredicted RBP12.33□□□□□ -0.44
TGFA-202ENST00000394241 EGFEM1PQ0D2K5 195 aa12.33□□□□□ -0.44
TGFA-202ENST00000394241 RAB32Q13637 225 aa12.33□□□□□ -0.44
TGFA-202ENST00000394241 C9orf66Q5T8R8 295 aa12.33□□□□□ -0.44
TGFA-202ENST00000394241 OR4X1Q8NH49 305 aa12.33□□□□□ -0.44
TGFA-202ENST00000394241 MED28Q9H204 178 aa12.33□□□□□ -0.44
TGFA-202ENST00000394241 PEMTQ9UBM1 199 aa12.33□□□□□ -0.44
TGFA-202ENST00000394241 CLN5O75503 358 aa12.32□□□□□ -0.44
TGFA-202ENST00000394241 TMEM50AO95807 157 aa12.32□□□□□ -0.44
TGFA-202ENST00000394241 NHLRC4P0CG21 123 aaPredicted RBP12.32□□□□□ -0.44
TGFA-202ENST00000394241 RND2P52198 227 aa12.32□□□□□ -0.44
TGFA-202ENST00000394241 H2BFSP57053 126 aa12.32□□□□□ -0.44
TGFA-202ENST00000394241 IL15RAQ13261 267 aa12.32□□□□□ -0.44
TGFA-202ENST00000394241 MLANAQ16655 118 aa12.32□□□□□ -0.44
TGFA-202ENST00000394241 FAM106AQ4KMX7 169 aa12.32□□□□□ -0.44
TGFA-202ENST00000394241 GPHB5Q86YW7 130 aa12.32□□□□□ -0.44
TGFA-202ENST00000394241 OR9G4Q8NGQ1 327 aa12.32□□□□□ -0.44
TGFA-202ENST00000394241 SLC35E1Q96K37 410 aa12.32□□□□□ -0.44
TGFA-202ENST00000394241 CHRDL1Q9BU40 450 aa12.32□□□□□ -0.44
TGFA-202ENST00000394241 ELOVL1Q9BW60 279 aa12.32□□□□□ -0.44
TGFA-202ENST00000394241 MRPL36Q9P0J6 103 aaKnown RBP12.32□□□□□ -0.44
TGFA-202ENST00000394241 DYNC2H1Q8NCM8 4307 aaKnown RBP12.32□□□□□ -0.44
TGFA-202ENST00000394241 IGHV3-35A0A0C4DH35 117 aa12.31□□□□□ -0.44
TGFA-202ENST00000394241 LGALS9O00182 355 aa12.31□□□□□ -0.44
TGFA-202ENST00000394241 SAP30O75446 220 aa12.31□□□□□ -0.44
TGFA-202ENST00000394241 CTSGP08311 255 aa12.31□□□□□ -0.44
TGFA-202ENST00000394241 ADMP35318 185 aa12.31□□□□□ -0.44
TGFA-202ENST00000394241 GPX4P36969 197 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms