RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 TRAV30A0A087WSZ9 112 aa12.73□□□□□ -0.37
SNRPA1-202ENST00000394082 K7EQG2 157 aa12.73□□□□□ -0.37
SNRPA1-202ENST00000394082 GABARAPO95166 117 aa12.73□□□□□ -0.37
SNRPA1-202ENST00000394082 IFNA17P01571 189 aa12.73□□□□□ -0.37
SNRPA1-202ENST00000394082 MIFP14174 115 aa12.73□□□□□ -0.37
SNRPA1-202ENST00000394082 ELK1P19419 428 aa12.73□□□□□ -0.37
SNRPA1-202ENST00000394082 AKR1C2P52895 323 aa12.73□□□□□ -0.37
SNRPA1-202ENST00000394082 IZUMO4Q1ZYL8 232 aa12.73□□□□□ -0.37
SNRPA1-202ENST00000394082 AARDQ4LEZ3 155 aa12.73□□□□□ -0.37
SNRPA1-202ENST00000394082 RNASE10Q5GAN6 216 aaKnown RBP12.73□□□□□ -0.37
SNRPA1-202ENST00000394082 GPR107Q5VW38 600 aa12.73□□□□□ -0.37
SNRPA1-202ENST00000394082 LEMD1Q68G75 181 aa12.73□□□□□ -0.37
SNRPA1-202ENST00000394082 TRPT1Q86TN4 253 aaKnown RBP12.73□□□□□ -0.37
SNRPA1-202ENST00000394082 FAM24BQ8N5W8 94 aa12.73□□□□□ -0.37
SNRPA1-202ENST00000394082 METTL26Q96S19 204 aa12.73□□□□□ -0.37
SNRPA1-202ENST00000394082 TP53RKQ96S44 253 aa12.73□□□□□ -0.37
SNRPA1-202ENST00000394082 C3orf85A0A1B0GTC6 90 aa12.72□□□□□ -0.37
SNRPA1-202ENST00000394082 ZNF705EA8MWA4 302 aaPredicted RBP12.72□□□□□ -0.37
SNRPA1-202ENST00000394082 M0QYG6 137 aa12.72□□□□□ -0.37
SNRPA1-202ENST00000394082 GIG44P09565 113 aaPredicted RBP12.72□□□□□ -0.37
SNRPA1-202ENST00000394082 PGAM2P15259 253 aa12.72□□□□□ -0.37
SNRPA1-202ENST00000394082 ALDH3B2P48448 385 aa12.72□□□□□ -0.37
SNRPA1-202ENST00000394082 FNDC4Q9H6D8 234 aaPredicted RBP12.72□□□□□ -0.37
SNRPA1-202ENST00000394082 IGHV3-66A0A0C4DH42 116 aa12.71□□□□□ -0.37
SNRPA1-202ENST00000394082 HPGDSO60760 199 aa12.71□□□□□ -0.37
SNRPA1-202ENST00000394082 UCP1P25874 307 aa12.71□□□□□ -0.37
SNRPA1-202ENST00000394082 RORCP51449 518 aa12.71□□□□□ -0.37
SNRPA1-202ENST00000394082 SPINK9Q5DT21 86 aa12.71□□□□□ -0.37
SNRPA1-202ENST00000394082 FAM219AQ8IW50 185 aa12.71□□□□□ -0.37
SNRPA1-202ENST00000394082 OR52E5Q8NH55 327 aa12.71□□□□□ -0.37
SNRPA1-202ENST00000394082 ZFAND1Q8TCF1 268 aa12.71□□□□□ -0.37
SNRPA1-202ENST00000394082 DCANP1Q8TF63 244 aa12.71□□□□□ -0.37
SNRPA1-202ENST00000394082 C15orf40Q8WUR7 153 aa12.71□□□□□ -0.37
SNRPA1-202ENST00000394082 RRNAD1Q96FB5 475 aaKnown RBP12.71□□□□□ -0.37
SNRPA1-202ENST00000394082 NARS2Q96I59 477 aaKnown RBP12.71□□□□□ -0.37
SNRPA1-202ENST00000394082 NAA50Q9GZZ1 169 aaKnown RBP12.71□□□□□ -0.37
SNRPA1-202ENST00000394082 KLK11Q9UBX7 282 aa12.71□□□□□ -0.37
SNRPA1-202ENST00000394082 MTFP1Q9UDX5 166 aa12.71□□□□□ -0.37
SNRPA1-202ENST00000394082 RABAC1Q9UI14 185 aa12.71□□□□□ -0.37
SNRPA1-202ENST00000394082 APLNQ9ULZ1 77 aa12.71□□□□□ -0.37
SNRPA1-202ENST00000394082 IGKV1-17P01599 117 aa12.7□□□□□ -0.38
SNRPA1-202ENST00000394082 PI3P19957 117 aa12.7□□□□□ -0.38
SNRPA1-202ENST00000394082 OPRK1P41145 380 aa12.7□□□□□ -0.38
SNRPA1-202ENST00000394082 ETV6P41212 452 aa12.7□□□□□ -0.38
SNRPA1-202ENST00000394082 P2RY1P47900 373 aa12.7□□□□□ -0.38
SNRPA1-202ENST00000394082 EIF2B2P49770 351 aaKnown RBP12.7□□□□□ -0.38
SNRPA1-202ENST00000394082 PRR20EP86478 221 aa12.7□□□□□ -0.38
SNRPA1-202ENST00000394082 PRR20CP86479 221 aa12.7□□□□□ -0.38
SNRPA1-202ENST00000394082 PRR20DP86480 221 aa12.7□□□□□ -0.38
SNRPA1-202ENST00000394082 PRR20BP86481 221 aa12.7□□□□□ -0.38
SNRPA1-202ENST00000394082 PRR20AP86496 221 aa12.7□□□□□ -0.38
SNRPA1-202ENST00000394082 CTF1Q16619 201 aa12.7□□□□□ -0.38
SNRPA1-202ENST00000394082 MZT2AQ6P582 158 aa12.7□□□□□ -0.38
SNRPA1-202ENST00000394082 CCDC71LQ8N9Z2 235 aa12.7□□□□□ -0.38
SNRPA1-202ENST00000394082 TERB2Q8NHR7 220 aa12.7□□□□□ -0.38
SNRPA1-202ENST00000394082 AP3S1Q92572 193 aa12.7□□□□□ -0.38
SNRPA1-202ENST00000394082 KRTAP17-1Q9BYP8 105 aa12.7□□□□□ -0.38
SNRPA1-202ENST00000394082 ENY2Q9NPA8 101 aa12.7□□□□□ -0.38
SNRPA1-202ENST00000394082 U3KQE9 123 aa12.7□□□□□ -0.38
SNRPA1-202ENST00000394082 RPS10-NUDT3A0A1W2PQS6 291 aa12.69□□□□□ -0.38
SNRPA1-202ENST00000394082 DEFB4AO15263 64 aa12.69□□□□□ -0.38
SNRPA1-202ENST00000394082 CD3DP04234 171 aa12.69□□□□□ -0.38
SNRPA1-202ENST00000394082 RBMY1A1P0DJD3 496 aaKnown RBP12.69□□□□□ -0.38
SNRPA1-202ENST00000394082 RBMY1CP0DJD4 496 aa12.69□□□□□ -0.38
SNRPA1-202ENST00000394082 HTR2BP41595 481 aa12.69□□□□□ -0.38
SNRPA1-202ENST00000394082 HOXA1P49639 335 aaPredicted RBP12.69□□□□□ -0.38
SNRPA1-202ENST00000394082 AP2S1P53680 142 aaPredicted RBP12.69□□□□□ -0.38
SNRPA1-202ENST00000394082 SPCS3P61009 180 aa12.69□□□□□ -0.38
SNRPA1-202ENST00000394082 RBMY1FQ15415 496 aaKnown RBP12.69□□□□□ -0.38
SNRPA1-202ENST00000394082 TMEM230Q96A57 120 aa12.69□□□□□ -0.38
SNRPA1-202ENST00000394082 SEPSECSQ9HD40 501 aaKnown RBP12.69□□□□□ -0.38
SNRPA1-202ENST00000394082 MRPL36Q9P0J6 103 aaKnown RBP12.69□□□□□ -0.38
SNRPA1-202ENST00000394082 COPZ2Q9P299 210 aa12.69□□□□□ -0.38
SNRPA1-202ENST00000394082 IGHV4-28A0A0C4DH34 117 aa12.68□□□□□ -0.38
SNRPA1-202ENST00000394082 HELTA6NFD8 242 aa12.68□□□□□ -0.38
SNRPA1-202ENST00000394082 IGLL5B9A064 214 aa12.68□□□□□ -0.38
SNRPA1-202ENST00000394082 NOL3O60936 208 aaKnown RBP12.68□□□□□ -0.38
SNRPA1-202ENST00000394082 CDS2O95674 445 aa12.68□□□□□ -0.38
SNRPA1-202ENST00000394082 CD74P04233 296 aa12.68□□□□□ -0.38
SNRPA1-202ENST00000394082 TRIM16LQ309B1 348 aa12.68□□□□□ -0.38
SNRPA1-202ENST00000394082 CLVS1Q8IUQ0 354 aaPredicted RBP12.68□□□□□ -0.38
SNRPA1-202ENST00000394082 CSNK1G2-AS1Q8NCQ2 148 aa12.68□□□□□ -0.38
SNRPA1-202ENST00000394082 STXBP6Q8NFX7 210 aa12.68□□□□□ -0.38
SNRPA1-202ENST00000394082 OR52I2Q8NH67 350 aa12.68□□□□□ -0.38
SNRPA1-202ENST00000394082 CACFD1Q9UGQ2 172 aa12.68□□□□□ -0.38
SNRPA1-202ENST00000394082 TRAV10A0A0B4J240 114 aa12.67□□□□□ -0.38
SNRPA1-202ENST00000394082 SLC25A4P12235 298 aa12.67□□□□□ -0.38
SNRPA1-202ENST00000394082 PPP5CP53041 499 aa12.67□□□□□ -0.38
SNRPA1-202ENST00000394082 YPEL3P61236 119 aaPredicted RBP12.67□□□□□ -0.38
SNRPA1-202ENST00000394082 MLANAQ16655 118 aa12.67□□□□□ -0.38
SNRPA1-202ENST00000394082 TMEM229BQ8NBD8 167 aa12.67□□□□□ -0.38
SNRPA1-202ENST00000394082 OR1S2Q8NGQ3 325 aa12.67□□□□□ -0.38
SNRPA1-202ENST00000394082 RNASEH2CQ8TDP1 164 aaKnown RBP12.67□□□□□ -0.38
SNRPA1-202ENST00000394082 RAB2BQ8WUD1 216 aa12.67□□□□□ -0.38
SNRPA1-202ENST00000394082 ABHD1Q96SE0 405 aa12.67□□□□□ -0.38
SNRPA1-202ENST00000394082 TMEM222Q9H0R3 208 aa12.67□□□□□ -0.38
SNRPA1-202ENST00000394082 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.67□□□□□ -0.38
SNRPA1-202ENST00000394082 X6R8D5 127 aa12.67□□□□□ -0.38
SNRPA1-202ENST00000394082 A0A0G2JRQ6 117 aa12.66□□□□□ -0.38
SNRPA1-202ENST00000394082 FAM25AB3EWG3 89 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms