RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 CDC34P49427 236 aaPredicted RBP6.84□□□□□ -1.31
TDP1-203ENST00000393454 CTRB2Q6GPI1 263 aa6.84□□□□□ -1.31
TDP1-203ENST00000393454 IQCF2Q8IXL9 164 aa6.84□□□□□ -1.31
TDP1-203ENST00000393454 OR5T1Q8NG75 326 aa6.84□□□□□ -1.31
TDP1-203ENST00000393454 PIFOQ8TCI5 191 aa6.84□□□□□ -1.31
TDP1-203ENST00000393454 RBM14Q96PK6 669 aaKnown RBP6.84□□□□□ -1.31
TDP1-203ENST00000393454 HSPB9Q9BQS6 159 aa6.84□□□□□ -1.31
TDP1-203ENST00000393454 SLC45A2Q9UMX9 530 aa6.84□□□□□ -1.31
TDP1-203ENST00000393454 MOB4Q9Y3A3 225 aa6.84□□□□□ -1.31
TDP1-203ENST00000393454 CSPG4Q6UVK1 2322 aa6.84□□□□□ -1.31
TDP1-203ENST00000393454 TRAV1-1A0A0B4J248 108 aa6.83□□□□□ -1.32
TDP1-203ENST00000393454 TMEM218A2RU14 115 aa6.83□□□□□ -1.32
TDP1-203ENST00000393454 RBFOX3A6NFN3 312 aa6.83□□□□□ -1.32
TDP1-203ENST00000393454 CD5P06127 495 aa6.83□□□□□ -1.32
TDP1-203ENST00000393454 C9orf152Q5JTZ5 239 aa6.83□□□□□ -1.32
TDP1-203ENST00000393454 PVRIGQ6DKI7 326 aa6.83□□□□□ -1.32
TDP1-203ENST00000393454 CYP2G1PQ6ZSU1 146 aa6.83□□□□□ -1.32
TDP1-203ENST00000393454 C5orf56Q8N8D9 126 aa6.83□□□□□ -1.32
TDP1-203ENST00000393454 OR1L6Q8NGR2 347 aa6.83□□□□□ -1.32
TDP1-203ENST00000393454 RAB24Q969Q5 203 aa6.83□□□□□ -1.32
TDP1-203ENST00000393454 RARRES2Q99969 163 aa6.83□□□□□ -1.32
TDP1-203ENST00000393454 MRPL36Q9P0J6 103 aaKnown RBP6.83□□□□□ -1.32
TDP1-203ENST00000393454 GNG13Q9P2W3 67 aa6.83□□□□□ -1.32
TDP1-203ENST00000393454 DMRT1Q9Y5R6 373 aa6.83□□□□□ -1.32
TDP1-203ENST00000393454 CCDC168Q8NDH2 2452 aa6.83□□□□□ -1.32
TDP1-203ENST00000393454 ZANQ9Y493 2812 aa6.83□□□□□ -1.32
TDP1-203ENST00000393454 CELSR1Q9NYQ6 3014 aa6.83□□□□□ -1.32
TDP1-203ENST00000393454 MDFIC2A0A1B0GVS7 189 aa6.83□□□□□ -1.32
TDP1-203ENST00000393454 NPIPB5A8MRT5 1133 aa6.83□□□□□ -1.32
TDP1-203ENST00000393454 F8W036 122 aa6.83□□□□□ -1.32
TDP1-203ENST00000393454 APOC3P02656 99 aa6.83□□□□□ -1.32
TDP1-203ENST00000393454 CRYGCP07315 174 aa6.83□□□□□ -1.32
TDP1-203ENST00000393454 LINC00869P0C866 280 aa6.83□□□□□ -1.32
TDP1-203ENST00000393454 PPT1P50897 306 aa6.83□□□□□ -1.32
TDP1-203ENST00000393454 ECSCRQ19T08 205 aa6.83□□□□□ -1.32
TDP1-203ENST00000393454 ASPHD1Q5U4P2 390 aa6.83□□□□□ -1.32
TDP1-203ENST00000393454 UNQ5815/PRO19632Q6UWF5 114 aa6.83□□□□□ -1.32
TDP1-203ENST00000393454 BCL6BQ8N143 479 aaPredicted RBP6.83□□□□□ -1.32
TDP1-203ENST00000393454 NANPQ8TBE9 248 aa6.83□□□□□ -1.32
TDP1-203ENST00000393454 TMUB1Q9BVT8 246 aa6.83□□□□□ -1.32
TDP1-203ENST00000393454 TNFRSF19Q9NS68 423 aa6.83□□□□□ -1.32
TDP1-203ENST00000393454 CREBBPQ92793 2442 aa6.83□□□□□ -1.32
TDP1-203ENST00000393454 FASNP49327 2511 aaKnown RBP6.82□□□□□ -1.32
TDP1-203ENST00000393454 TCRBV4S1A1TA0A5B7 111 aa6.82□□□□□ -1.32
TDP1-203ENST00000393454 ATP6V0E1O15342 81 aa6.82□□□□□ -1.32
TDP1-203ENST00000393454 TSPAN9O75954 239 aa6.82□□□□□ -1.32
TDP1-203ENST00000393454 SFTA3P0C7M3 94 aa6.82□□□□□ -1.32
TDP1-203ENST00000393454 EGR2P11161 476 aaPredicted RBP6.82□□□□□ -1.32
TDP1-203ENST00000393454 BPIFB3P59826 476 aa6.82□□□□□ -1.32
TDP1-203ENST00000393454 PRR20EP86478 221 aa6.82□□□□□ -1.32
TDP1-203ENST00000393454 PRR20CP86479 221 aa6.82□□□□□ -1.32
TDP1-203ENST00000393454 PRR20DP86480 221 aa6.82□□□□□ -1.32
TDP1-203ENST00000393454 PRR20BP86481 221 aa6.82□□□□□ -1.32
TDP1-203ENST00000393454 PRR20AP86496 221 aa6.82□□□□□ -1.32
TDP1-203ENST00000393454 DEFA5Q01523 94 aa6.82□□□□□ -1.32
TDP1-203ENST00000393454 ZNF90Q03938 601 aa6.82□□□□□ -1.32
TDP1-203ENST00000393454 DEFB112Q30KQ8 113 aa6.82□□□□□ -1.32
TDP1-203ENST00000393454 TTC9CQ8N5M4 171 aa6.82□□□□□ -1.32
TDP1-203ENST00000393454 RXFP4Q8TDU9 374 aa6.82□□□□□ -1.32
TDP1-203ENST00000393454 TMPRSS5Q9H3S3 457 aa6.82□□□□□ -1.32
TDP1-203ENST00000393454 UNC79Q9P2D8 2635 aa6.82□□□□□ -1.32
TDP1-203ENST00000393454 ITPR3Q14573 2671 aa6.82□□□□□ -1.32
TDP1-203ENST00000393454 A6NDX4 124 aa6.81□□□□□ -1.32
TDP1-203ENST00000393454 LINC01548A6NM66 108 aa6.81□□□□□ -1.32
TDP1-203ENST00000393454 SEC14L6B5MCN3 397 aa6.81□□□□□ -1.32
TDP1-203ENST00000393454 C9JQL5 133 aa6.81□□□□□ -1.32
TDP1-203ENST00000393454 I3L2K1 104 aa6.81□□□□□ -1.32
TDP1-203ENST00000393454 IFNA1P01562 189 aa6.81□□□□□ -1.32
TDP1-203ENST00000393454 CEBPGP53567 150 aa6.81□□□□□ -1.32
TDP1-203ENST00000393454 RHOBP62745 196 aa6.81□□□□□ -1.32
TDP1-203ENST00000393454 CIARTQ8N365 385 aaPredicted RBP6.81□□□□□ -1.32
TDP1-203ENST00000393454 THAP8Q8NA92 274 aa6.81□□□□□ -1.32
TDP1-203ENST00000393454 SGMS2Q8NHU3 365 aa6.81□□□□□ -1.32
TDP1-203ENST00000393454 SCRT1Q9BWW7 348 aa6.81□□□□□ -1.32
TDP1-203ENST00000393454 GSX1Q9H4S2 264 aaPredicted RBP6.81□□□□□ -1.32
TDP1-203ENST00000393454 ZNF355PQ9NSJ1 428 aa6.81□□□□□ -1.32
TDP1-203ENST00000393454 DOK5Q9P104 306 aa6.81□□□□□ -1.32
TDP1-203ENST00000393454 PITPNC1Q9UKF7 332 aa6.81□□□□□ -1.32
TDP1-203ENST00000393454 ITPR2Q14571 2701 aa6.81□□□□□ -1.32
TDP1-203ENST00000393454 TEX15Q9BXT5 2789 aa6.81□□□□□ -1.32
TDP1-203ENST00000393454 FAM78BQ5VT40 261 aa6.81□□□□□ -1.32
TDP1-203ENST00000393454 SPATA31B1PQ5VZV4 182 aa6.81□□□□□ -1.32
TDP1-203ENST00000393454 CCDC28AQ8IWP9 274 aa6.81□□□□□ -1.32
TDP1-203ENST00000393454 TMEM116Q8NCL8 245 aa6.81□□□□□ -1.32
TDP1-203ENST00000393454 SEPSECSQ9HD40 501 aaKnown RBP6.81□□□□□ -1.32
TDP1-203ENST00000393454 THYN1Q9P016 225 aa6.81□□□□□ -1.32
TDP1-203ENST00000393454 S4R3C0 116 aa6.81□□□□□ -1.32
TDP1-203ENST00000393454 HECTD1Q9ULT8 2610 aa6.81□□□□□ -1.32
TDP1-203ENST00000393454 IGLV11-55A0A075B6I3 123 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 IGKV1D-37A0A075B6S9 117 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 LOC102723971A0A1B0GUV8 181 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 K7EIM0 57 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 OR2J3O76001 311 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 BCL2P10415 239 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 SELENOTP62341 195 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 ICAM4Q14773 271 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 ZNF506Q5JVG8 444 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 RBMS3Q6XE24 437 aaKnown RBP6.8□□□□□ -1.32
TDP1-203ENST00000393454 SLC35E3Q7Z769 313 aa6.8□□□□□ -1.32
TDP1-203ENST00000393454 OR4X1Q8NH49 305 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms