RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 RAB24Q969Q5 203 aa11.98□□□□□ -0.49
MKS1-202ENST00000393119 TMEM68Q96MH6 324 aa11.98□□□□□ -0.49
MKS1-202ENST00000393119 MGST2Q99735 147 aa11.98□□□□□ -0.49
MKS1-202ENST00000393119 SSX3Q99909 188 aa11.98□□□□□ -0.49
MKS1-202ENST00000393119 NDUFAF3Q9BU61 184 aa11.98□□□□□ -0.49
MKS1-202ENST00000393119 TRBV24-1A0A075B6N3 115 aa11.97□□□□□ -0.49
MKS1-202ENST00000393119 VENTXO95231 258 aa11.97□□□□□ -0.49
MKS1-202ENST00000393119 RNASE2P10153 161 aaKnown RBP11.97□□□□□ -0.49
MKS1-202ENST00000393119 GATA2P23769 480 aaPredicted RBP11.97□□□□□ -0.49
MKS1-202ENST00000393119 VWC2Q2TAL6 325 aa11.97□□□□□ -0.49
MKS1-202ENST00000393119 FAM120AOSQ5T036 256 aa11.97□□□□□ -0.49
MKS1-202ENST00000393119 OR2T6Q8NHC8 308 aa11.97□□□□□ -0.49
MKS1-202ENST00000393119 C10orf105Q8TEF2 133 aa11.97□□□□□ -0.49
MKS1-202ENST00000393119 FAM210BQ96KR6 192 aa11.97□□□□□ -0.49
MKS1-202ENST00000393119 NIPSNAP3BQ9BS92 247 aa11.97□□□□□ -0.49
MKS1-202ENST00000393119 ACTR3CQ9C0K3 210 aaPredicted RBP11.97□□□□□ -0.49
MKS1-202ENST00000393119 SLC25A22Q9H936 323 aa11.97□□□□□ -0.49
MKS1-202ENST00000393119 ZNF257Q9Y2Q1 563 aa11.97□□□□□ -0.49
MKS1-202ENST00000393119 CRYGBP07316 175 aa11.97□□□□□ -0.49
MKS1-202ENST00000393119 GZMBP10144 247 aa11.97□□□□□ -0.49
MKS1-202ENST00000393119 COX6B1P14854 86 aa11.97□□□□□ -0.49
MKS1-202ENST00000393119 USF1P22415 310 aaPredicted RBP11.97□□□□□ -0.49
MKS1-202ENST00000393119 NUTF2P61970 127 aaKnown RBP11.97□□□□□ -0.49
MKS1-202ENST00000393119 HES1Q14469 280 aa11.97□□□□□ -0.49
MKS1-202ENST00000393119 COA6Q5JTJ3 125 aaKnown RBP11.97□□□□□ -0.49
MKS1-202ENST00000393119 FFAR4Q5NUL3 377 aa11.97□□□□□ -0.49
MKS1-202ENST00000393119 MIC13Q5XKP0 118 aa11.97□□□□□ -0.49
MKS1-202ENST00000393119 FAM90A2PQ658T7 463 aa11.97□□□□□ -0.49
MKS1-202ENST00000393119 NOL4LQ96MY1 436 aaPredicted RBP11.97□□□□□ -0.49
MKS1-202ENST00000393119 FAM103A1Q9BTL3 118 aaKnown RBP11.97□□□□□ -0.49
MKS1-202ENST00000393119 PITPNC1Q9UKF7 332 aa11.97□□□□□ -0.49
MKS1-202ENST00000393119 SIGLEC9Q9Y336 463 aa11.97□□□□□ -0.49
MKS1-202ENST00000393119 IGKV1OR2-108A0A075B7D4 117 aa11.96□□□□□ -0.49
MKS1-202ENST00000393119 VMA21Q3ZAQ7 101 aa11.96□□□□□ -0.49
MKS1-202ENST00000393119 OR1L8Q8NGR8 309 aa11.96□□□□□ -0.49
MKS1-202ENST00000393119 AJUBAQ96IF1 538 aa11.96□□□□□ -0.49
MKS1-202ENST00000393119 PPP1R14DQ9NXH3 145 aa11.96□□□□□ -0.49
MKS1-202ENST00000393119 MRPL36Q9P0J6 103 aaKnown RBP11.96□□□□□ -0.49
MKS1-202ENST00000393119 WDR83OSQ9Y284 106 aa11.96□□□□□ -0.49
MKS1-202ENST00000393119 TRAV1-1A0A0B4J248 108 aa11.96□□□□□ -0.5
MKS1-202ENST00000393119 PRSS8Q16651 343 aa11.96□□□□□ -0.5
MKS1-202ENST00000393119 TMEM183AQ8IXX5 376 aa11.96□□□□□ -0.5
MKS1-202ENST00000393119 ZNF664Q8N3J9 261 aa11.96□□□□□ -0.5
MKS1-202ENST00000393119 PIP4P2Q8N4L2 257 aa11.96□□□□□ -0.5
MKS1-202ENST00000393119 OR5B3Q8NH48 314 aa11.96□□□□□ -0.5
MKS1-202ENST00000393119 GATAD1Q8WUU5 269 aa11.96□□□□□ -0.5
MKS1-202ENST00000393119 LOC102723971A0A1B0GUV8 181 aa11.95□□□□□ -0.5
MKS1-202ENST00000393119 MFAP2P55001 183 aa11.95□□□□□ -0.5
MKS1-202ENST00000393119 RAB11AP62491 216 aa11.95□□□□□ -0.5
MKS1-202ENST00000393119 MMDQ15546 238 aa11.95□□□□□ -0.5
MKS1-202ENST00000393119 ATP6V1FQ16864 119 aa11.95□□□□□ -0.5
MKS1-202ENST00000393119 P2RX4Q99571 388 aa11.95□□□□□ -0.5
MKS1-202ENST00000393119 AMMECR1Q9Y4X0 333 aaPredicted RBP11.95□□□□□ -0.5
MKS1-202ENST00000393119 ANKRD17O75179 2603 aaKnown RBP11.95□□□□□ -0.5
MKS1-202ENST00000393119 TCAPO15273 167 aa11.94□□□□□ -0.5
MKS1-202ENST00000393119 SOX15O60248 233 aa11.94□□□□□ -0.5
MKS1-202ENST00000393119 LGALS7P47929 136 aa11.94□□□□□ -0.5
MKS1-202ENST00000393119 ZNF787Q6DD87 383 aa11.94□□□□□ -0.5
MKS1-202ENST00000393119 DPPA3Q6W0C5 159 aa11.94□□□□□ -0.5
MKS1-202ENST00000393119 PIMREGQ9BSJ6 248 aa11.94□□□□□ -0.5
MKS1-202ENST00000393119 PSMG3Q9BT73 122 aaPredicted RBP11.94□□□□□ -0.5
MKS1-202ENST00000393119 FNDC4Q9H6D8 234 aaPredicted RBP11.94□□□□□ -0.5
MKS1-202ENST00000393119 APCP25054 2843 aa11.94□□□□□ -0.5
MKS1-202ENST00000393119 AMBPP02760 352 aa11.94□□□□□ -0.5
MKS1-202ENST00000393119 CEBPGP53567 150 aa11.94□□□□□ -0.5
MKS1-202ENST00000393119 RPP30P78346 268 aaKnown RBP11.94□□□□□ -0.5
MKS1-202ENST00000393119 RELQ04864 619 aaPredicted RBP11.94□□□□□ -0.5
MKS1-202ENST00000393119 PNRC1Q12796 327 aaPredicted RBP11.94□□□□□ -0.5
MKS1-202ENST00000393119 PLGLAQ15195 96 aa11.94□□□□□ -0.5
MKS1-202ENST00000393119 TMEM41BQ5BJD5 291 aa11.94□□□□□ -0.5
MKS1-202ENST00000393119 BRD3OSQ6XYD6 125 aa11.94□□□□□ -0.5
MKS1-202ENST00000393119 PPP1R27Q86WC6 154 aa11.94□□□□□ -0.5
MKS1-202ENST00000393119 EAF1Q96JC9 268 aaPredicted RBP11.94□□□□□ -0.5
MKS1-202ENST00000393119 FKBP11Q9NYL4 201 aa11.94□□□□□ -0.5
MKS1-202ENST00000393119 SH2D7A6NKC9 451 aaPredicted RBP11.93□□□□□ -0.5
MKS1-202ENST00000393119 VWC2LB2RUY7 222 aa11.93□□□□□ -0.5
MKS1-202ENST00000393119 CLEC2AQ6UVW9 174 aa11.93□□□□□ -0.5
MKS1-202ENST00000393119 OR10G9Q8NGN4 311 aa11.93□□□□□ -0.5
MKS1-202ENST00000393119 OR10G7Q8NGN6 311 aa11.93□□□□□ -0.5
MKS1-202ENST00000393119 VSTM2AQ8TAG5 236 aa11.93□□□□□ -0.5
MKS1-202ENST00000393119 RBM14Q96PK6 669 aaKnown RBP11.93□□□□□ -0.5
MKS1-202ENST00000393119 PYGO2Q9BRQ0 406 aa11.93□□□□□ -0.5
MKS1-202ENST00000393119 GNG13Q9P2W3 67 aa11.93□□□□□ -0.5
MKS1-202ENST00000393119 DOPEY2Q9Y3R5 2298 aa11.93□□□□□ -0.5
MKS1-202ENST00000393119 IGLC7A0M8Q6 106 aa11.93□□□□□ -0.5
MKS1-202ENST00000393119 ZFP92A6NM28 416 aa11.93□□□□□ -0.5
MKS1-202ENST00000393119 CLDN34H7C241 214 aa11.93□□□□□ -0.5
MKS1-202ENST00000393119 SNRPCP09234 159 aaKnown RBP11.93□□□□□ -0.5
MKS1-202ENST00000393119 SAA4P35542 130 aa11.93□□□□□ -0.5
MKS1-202ENST00000393119 BSXQ3C1V8 233 aa11.93□□□□□ -0.5
MKS1-202ENST00000393119 GGTLC1Q9BX51 225 aa11.93□□□□□ -0.5
MKS1-202ENST00000393119 PARD6GQ9BYG4 376 aaPredicted RBP11.93□□□□□ -0.5
MKS1-202ENST00000393119 SERF2P84101 59 aa11.92□□□□□ -0.5
MKS1-202ENST00000393119 SPATA31B1PQ5VZV4 182 aa11.92□□□□□ -0.5
MKS1-202ENST00000393119 CENPVQ7Z7K6 275 aaPredicted RBP11.92□□□□□ -0.5
MKS1-202ENST00000393119 TEX45Q8NA69 505 aa11.92□□□□□ -0.5
MKS1-202ENST00000393119 ACY3Q96HD9 319 aa11.92□□□□□ -0.5
MKS1-202ENST00000393119 LSM4Q9Y4Z0 139 aaKnown RBP11.92□□□□□ -0.5
MKS1-202ENST00000393119 CENPVL3A0A0U1RRI6 287 aa11.92□□□□□ -0.5
MKS1-202ENST00000393119 C1orf122Q6ZSJ8 110 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms