RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 C1QTNF9P0C862 333 aa12.48□□□□□ -0.41
CCDC50-201ENST00000392455 TPRX1Q8N7U7 411 aa12.48□□□□□ -0.41
CCDC50-201ENST00000392455 NPDC1Q9NQX5 325 aaPredicted RBP12.48□□□□□ -0.41
CCDC50-201ENST00000392455 DLL3Q9NYJ7 618 aa12.48□□□□□ -0.41
CCDC50-201ENST00000392455 EPDR1Q9UM22 224 aa12.48□□□□□ -0.41
CCDC50-201ENST00000392455 H3BQ85 93 aa12.48□□□□□ -0.41
CCDC50-201ENST00000392455 RSPO3Q9BXY4 272 aaPredicted RBP12.48□□□□□ -0.41
CCDC50-201ENST00000392455 RBM38Q9H0Z9 239 aaKnown RBP12.48□□□□□ -0.41
CCDC50-201ENST00000392455 DTX4Q9Y2E6 619 aa12.48□□□□□ -0.41
CCDC50-201ENST00000392455 ARID2Q68CP9 1835 aa12.47□□□□□ -0.41
CCDC50-201ENST00000392455 TMEM8BA6NDV4 472 aa12.47□□□□□ -0.41
CCDC50-201ENST00000392455 FOXL2P58012 376 aa12.47□□□□□ -0.41
CCDC50-201ENST00000392455 IGHV1-45A0A0A0MS14 117 aa12.47□□□□□ -0.41
CCDC50-201ENST00000392455 OSTCQ9NRP0 149 aa12.47□□□□□ -0.41
CCDC50-201ENST00000392455 INS-IGF2F8WCM5 200 aa12.47□□□□□ -0.41
CCDC50-201ENST00000392455 UPK3AO75631 287 aa12.47□□□□□ -0.41
CCDC50-201ENST00000392455 INSP01308 110 aa12.47□□□□□ -0.41
CCDC50-201ENST00000392455 C1QTNF12Q5T7M4 302 aa12.47□□□□□ -0.41
CCDC50-201ENST00000392455 Q9H3A6 140 aa12.47□□□□□ -0.41
CCDC50-201ENST00000392455 CXCL2P19875 107 aa12.47□□□□□ -0.41
CCDC50-201ENST00000392455 C1orf100Q5SVJ3 147 aa12.47□□□□□ -0.41
CCDC50-201ENST00000392455 NPIPB3Q92617 1050 aa12.47□□□□□ -0.41
CCDC50-201ENST00000392455 TRACP01848 142 aa12.47□□□□□ -0.41
CCDC50-201ENST00000392455 CELA2AP08217 269 aa12.47□□□□□ -0.41
CCDC50-201ENST00000392455 APOBEC3AP31941 199 aaPredicted RBP12.47□□□□□ -0.41
CCDC50-201ENST00000392455 OCIAD2Q56VL3 154 aa12.47□□□□□ -0.41
CCDC50-201ENST00000392455 PPP1R27Q86WC6 154 aa12.47□□□□□ -0.41
CCDC50-201ENST00000392455 CHCHD5Q9BSY4 110 aa12.47□□□□□ -0.41
CCDC50-201ENST00000392455 SSBP3Q9BWW4 388 aaPredicted RBP12.47□□□□□ -0.41
CCDC50-201ENST00000392455 IFI27L2Q9H2X8 130 aa12.47□□□□□ -0.41
CCDC50-201ENST00000392455 SCTP09683 121 aa12.47□□□□□ -0.41
CCDC50-201ENST00000392455 ZNF79Q15937 498 aa12.47□□□□□ -0.41
CCDC50-201ENST00000392455 POU2AF1Q16633 256 aa12.47□□□□□ -0.41
CCDC50-201ENST00000392455 NHLRC3Q5JS37 347 aa12.47□□□□□ -0.41
CCDC50-201ENST00000392455 STPG1Q5TH74 334 aa12.47□□□□□ -0.41
CCDC50-201ENST00000392455 SLC25A48Q6ZT89 311 aaKnown RBP12.47□□□□□ -0.41
CCDC50-201ENST00000392455 TLNRD1Q9H1K6 362 aa12.47□□□□□ -0.41
CCDC50-201ENST00000392455 C1orf53Q5VUE5 145 aa12.47□□□□□ -0.41
CCDC50-201ENST00000392455 TEX43Q6ZNM6 134 aa12.47□□□□□ -0.41
CCDC50-201ENST00000392455 ZNF703Q9H7S9 590 aaPredicted RBP12.47□□□□□ -0.41
CCDC50-201ENST00000392455 C5orf67F2Z3F1 127 aa12.46□□□□□ -0.41
CCDC50-201ENST00000392455 VDAC2P45880 294 aaPredicted RBP12.46□□□□□ -0.41
CCDC50-201ENST00000392455 UTF1Q5T230 341 aa12.46□□□□□ -0.41
CCDC50-201ENST00000392455 C15orf61A6NNL5 157 aa12.46□□□□□ -0.41
CCDC50-201ENST00000392455 SS18Q15532 418 aa12.46□□□□□ -0.41
CCDC50-201ENST00000392455 MRAPQ8TCY5 172 aa12.46□□□□□ -0.41
CCDC50-201ENST00000392455 CCL20P78556 96 aa12.46□□□□□ -0.42
CCDC50-201ENST00000392455 NRN1LQ496H8 165 aa12.46□□□□□ -0.42
CCDC50-201ENST00000392455 MED13LQ71F56 2210 aa12.46□□□□□ -0.42
CCDC50-201ENST00000392455 LURAP1LQ8IV03 231 aa12.46□□□□□ -0.42
CCDC50-201ENST00000392455 ITLN1Q8WWA0 313 aa12.46□□□□□ -0.42
CCDC50-201ENST00000392455 GSN-AS1Q9NRJ2 163 aa12.46□□□□□ -0.42
CCDC50-201ENST00000392455 FBXL7Q9UJT9 491 aa12.46□□□□□ -0.42
CCDC50-201ENST00000392455 PTPRFP10586 1907 aa12.45□□□□□ -0.42
CCDC50-201ENST00000392455 RCC1LQ96I51 464 aaKnown RBP12.45□□□□□ -0.42
CCDC50-201ENST00000392455 KLHDC2Q9Y2U9 406 aa12.45□□□□□ -0.42
CCDC50-201ENST00000392455 MLNRO43193 412 aa12.45□□□□□ -0.42
CCDC50-201ENST00000392455 TCTEX1D4Q5JR98 221 aa12.45□□□□□ -0.42
CCDC50-201ENST00000392455 PILRBQ9UKJ0 227 aa12.45□□□□□ -0.42
CCDC50-201ENST00000392455 MED13Q9UHV7 2174 aa12.45□□□□□ -0.42
CCDC50-201ENST00000392455 IGKV1D-16P01601 117 aa12.45□□□□□ -0.42
CCDC50-201ENST00000392455 EGR2P11161 476 aaPredicted RBP12.45□□□□□ -0.42
CCDC50-201ENST00000392455 ERCC8Q13216 396 aa12.45□□□□□ -0.42
CCDC50-201ENST00000392455 SPRED2Q7Z698 418 aa12.45□□□□□ -0.42
CCDC50-201ENST00000392455 TMEM52Q8NDY8 209 aa12.45□□□□□ -0.42
CCDC50-201ENST00000392455 BOD1L2Q8IYS8 172 aa12.45□□□□□ -0.42
CCDC50-201ENST00000392455 IFI27L1Q96BM0 104 aa12.45□□□□□ -0.42
CCDC50-201ENST00000392455 DSCR8Q96T75 97 aa12.45□□□□□ -0.42
CCDC50-201ENST00000392455 RPL36AP83881 106 aaKnown RBP12.45□□□□□ -0.42
CCDC50-201ENST00000392455 PSG4Q00888 419 aa12.45□□□□□ -0.42
CCDC50-201ENST00000392455 ZPLD1Q8TCW7 415 aa12.45□□□□□ -0.42
CCDC50-201ENST00000392455 RPL36ALQ969Q0 106 aaKnown RBP12.45□□□□□ -0.42
CCDC50-201ENST00000392455 TMEM242Q9NWH2 141 aa12.45□□□□□ -0.42
CCDC50-201ENST00000392455 F12P00748 615 aaPredicted RBP12.44□□□□□ -0.42
CCDC50-201ENST00000392455 IGKV3-20P01619 116 aa12.44□□□□□ -0.42
CCDC50-201ENST00000392455 PLXND1Q9Y4D7 1925 aa12.44□□□□□ -0.42
CCDC50-201ENST00000392455 TRBV5-5A0A0J9YX44 114 aa12.44□□□□□ -0.42
CCDC50-201ENST00000392455 TMEM170AQ8WVE7 144 aa12.44□□□□□ -0.42
CCDC50-201ENST00000392455 PRSS22Q9GZN4 317 aa12.44□□□□□ -0.42
CCDC50-201ENST00000392455 MARF1Q9Y4F3 1742 aaKnown RBP12.44□□□□□ -0.42
CCDC50-201ENST00000392455 ZG16O60844 167 aa12.44□□□□□ -0.42
CCDC50-201ENST00000392455 GLRXP35754 106 aa12.44□□□□□ -0.42
CCDC50-201ENST00000392455 FOXA3P55318 350 aaPredicted RBP12.44□□□□□ -0.42
CCDC50-201ENST00000392455 Q96M66 194 aa12.44□□□□□ -0.42
CCDC50-201ENST00000392455 PLAC1Q9HBJ0 212 aa12.44□□□□□ -0.42
CCDC50-201ENST00000392455 PLA2G10O15496 165 aa12.44□□□□□ -0.42
CCDC50-201ENST00000392455 OR9G9P0C7N8 305 aa12.44□□□□□ -0.42
CCDC50-201ENST00000392455 TMEM126AQ9H061 195 aa12.44□□□□□ -0.42
CCDC50-201ENST00000392455 MED12LQ86YW9 2145 aa12.43□□□□□ -0.42
CCDC50-201ENST00000392455 FOXS1O43638 330 aa12.43□□□□□ -0.42
CCDC50-201ENST00000392455 IGHMP01871 453 aa12.43□□□□□ -0.42
CCDC50-201ENST00000392455 SLC22A18ASQ8N1D0 253 aa12.43□□□□□ -0.42
CCDC50-201ENST00000392455 IL18BPO95998 194 aa12.43□□□□□ -0.42
CCDC50-201ENST00000392455 FAM168AQ92567 244 aa12.43□□□□□ -0.42
CCDC50-201ENST00000392455 C5orf66Q9H5L9 145 aa12.43□□□□□ -0.42
CCDC50-201ENST00000392455 A0A0J9YW62 118 aa12.42□□□□□ -0.42
CCDC50-201ENST00000392455 SELLP14151 372 aa12.42□□□□□ -0.42
CCDC50-201ENST00000392455 LY6EQ16553 131 aa12.42□□□□□ -0.42
CCDC50-201ENST00000392455 VCYO14598 125 aa12.42□□□□□ -0.42
CCDC50-201ENST00000392455 REG1AP05451 166 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms