RNA–Protein interactions for RNA: ENST00000391066.1

RNU6-1000P-201, Transcript of RNA, U6 small nuclear 1000, pseudogene, humanhuman

BASIC

Gene RNU6-1000P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1000P-201ENST00000391066 ERGIC3Q9Y282 383 aa0.47□□□□□ -2.33
RNU6-1000P-201ENST00000391066 PQLC2LA1A4F0 135 aa0.46□□□□□ -2.34
RNU6-1000P-201ENST00000391066 CLDN25C9JDP6 229 aa0.46□□□□□ -2.34
RNU6-1000P-201ENST00000391066 PSMD12O00232 456 aaPredicted RBP0.46□□□□□ -2.34
RNU6-1000P-201ENST00000391066 CALB1P05937 261 aa0.46□□□□□ -2.34
RNU6-1000P-201ENST00000391066 MGST1P10620 155 aaKnown RBP0.46□□□□□ -2.34
RNU6-1000P-201ENST00000391066 HIST1H1TP22492 207 aaPredicted RBP0.46□□□□□ -2.34
RNU6-1000P-201ENST00000391066 CDC42P60953 191 aa0.46□□□□□ -2.34
RNU6-1000P-201ENST00000391066 C1orf137Q5JT78 98 aa0.46□□□□□ -2.34
RNU6-1000P-201ENST00000391066 OR52E6Q96RD3 313 aa0.46□□□□□ -2.34
RNU6-1000P-201ENST00000391066 RASL12Q9NYN1 266 aa0.46□□□□□ -2.34
RNU6-1000P-201ENST00000391066 EXOC1LA0A1B0GW35 172 aa0.45□□□□□ -2.34
RNU6-1000P-201ENST00000391066 FAAHO00519 579 aa0.45□□□□□ -2.34
RNU6-1000P-201ENST00000391066 SULT1B1O43704 296 aa0.45□□□□□ -2.34
RNU6-1000P-201ENST00000391066 OR2F1Q13607 317 aa0.45□□□□□ -2.34
RNU6-1000P-201ENST00000391066 SOSTDC1Q6X4U4 206 aa0.45□□□□□ -2.34
RNU6-1000P-201ENST00000391066 HS3ST2Q9Y278 367 aa0.45□□□□□ -2.34
RNU6-1000P-201ENST00000391066 TMEM56-RWDD3S4R434 201 aa0.45□□□□□ -2.34
RNU6-1000P-201ENST00000391066 CNTRLQ7Z7A1 2325 aa0.45□□□□□ -2.34
RNU6-1000P-201ENST00000391066 E9PCH4 1651 aa0.45□□□□□ -2.34
RNU6-1000P-201ENST00000391066 NUP155O75694 1391 aa0.45□□□□□ -2.34
RNU6-1000P-201ENST00000391066 TRAV9-1A0A075B6T8 112 aa0.44□□□□□ -2.34
RNU6-1000P-201ENST00000391066 ZNF25P17030 456 aaPredicted RBP0.44□□□□□ -2.34
RNU6-1000P-201ENST00000391066 RPL5P46777 297 aaKnown RBP0.44□□□□□ -2.34
RNU6-1000P-201ENST00000391066 SPCS3P61009 180 aa0.44□□□□□ -2.34
RNU6-1000P-201ENST00000391066 PSME3P61289 254 aa0.44□□□□□ -2.34
RNU6-1000P-201ENST00000391066 TPM4P67936 248 aa0.44□□□□□ -2.34
RNU6-1000P-201ENST00000391066 OR10J5Q8NHC4 309 aa0.44□□□□□ -2.34
RNU6-1000P-201ENST00000391066 TSPAN32Q96QS1 320 aa0.44□□□□□ -2.34
RNU6-1000P-201ENST00000391066 MRPS26Q9BYN8 205 aaKnown RBP0.44□□□□□ -2.34
RNU6-1000P-201ENST00000391066 CDC42SE1Q9NRR8 79 aa0.44□□□□□ -2.34
RNU6-1000P-201ENST00000391066 MTUS2Q5JR59 1369 aa0.44□□□□□ -2.34
RNU6-1000P-201ENST00000391066 SNAPC4Q5SXM2 1469 aa0.43□□□□□ -2.34
RNU6-1000P-201ENST00000391066 HECW1Q76N89 1606 aa0.43□□□□□ -2.34
RNU6-1000P-201ENST00000391066 CETN3O15182 167 aa0.43□□□□□ -2.34
RNU6-1000P-201ENST00000391066 HIST1H1EP10412 219 aaKnown RBP0.43□□□□□ -2.34
RNU6-1000P-201ENST00000391066 CD79AP11912 226 aa0.43□□□□□ -2.34
RNU6-1000P-201ENST00000391066 RPS20P60866 119 aaKnown RBP0.43□□□□□ -2.34
RNU6-1000P-201ENST00000391066 MPV17LQ2QL34 196 aa0.43□□□□□ -2.34
RNU6-1000P-201ENST00000391066 SPATA8Q6RVD6 105 aa0.43□□□□□ -2.34
RNU6-1000P-201ENST00000391066 ANKRD29Q8N6D5 301 aa0.43□□□□□ -2.34
RNU6-1000P-201ENST00000391066 C3orf56Q8N813 242 aa0.43□□□□□ -2.34
RNU6-1000P-201ENST00000391066 BORCS5Q969J3 196 aa0.43□□□□□ -2.34
RNU6-1000P-201ENST00000391066 PPP1R2P1Q96PQ5 205 aa0.43□□□□□ -2.34
RNU6-1000P-201ENST00000391066 TMEM70Q9BUB7 260 aa0.43□□□□□ -2.34
RNU6-1000P-201ENST00000391066 PKIGQ9Y2B9 76 aa0.43□□□□□ -2.34
RNU6-1000P-201ENST00000391066 WRNQ14191 1432 aaPredicted RBP eCLIP0.43□□□□□ -2.34
RNU6-1000P-201ENST00000391066 COL1A1P02452 1464 aaPredicted RBP0.42□□□□□ -2.34
RNU6-1000P-201ENST00000391066 HECW2Q9P2P5 1572 aa0.42□□□□□ -2.34
RNU6-1000P-201ENST00000391066 TGIF2-C20orf24A0A0A6YYL0 155 aa0.42□□□□□ -2.34
RNU6-1000P-201ENST00000391066 ZNF736B4DX44 427 aaPredicted RBP0.42□□□□□ -2.34
RNU6-1000P-201ENST00000391066 OR2J2O76002 312 aa0.42□□□□□ -2.34
RNU6-1000P-201ENST00000391066 PROSCO94903 275 aa0.42□□□□□ -2.34
RNU6-1000P-201ENST00000391066 TNNC2P02585 160 aa0.42□□□□□ -2.34
RNU6-1000P-201ENST00000391066 DEFB113Q30KQ7 82 aa0.42□□□□□ -2.34
RNU6-1000P-201ENST00000391066 CDKL4Q5MAI5 379 aa0.42□□□□□ -2.34
RNU6-1000P-201ENST00000391066 GPR146Q96CH1 333 aa0.42□□□□□ -2.34
RNU6-1000P-201ENST00000391066 TRAV3A0A0B4J244 114 aa0.41□□□□□ -2.34
RNU6-1000P-201ENST00000391066 A0A1W2PPM0 123 aa0.41□□□□□ -2.34
RNU6-1000P-201ENST00000391066 NCR3O14931 201 aa0.41□□□□□ -2.34
RNU6-1000P-201ENST00000391066 MAGOHP61326 146 aaKnown RBP0.41□□□□□ -2.34
RNU6-1000P-201ENST00000391066 C8orf74Q6P047 294 aa0.41□□□□□ -2.34
RNU6-1000P-201ENST00000391066 OR52R1Q8NGF1 315 aa0.41□□□□□ -2.34
RNU6-1000P-201ENST00000391066 OR13D1Q8NGV5 346 aa0.41□□□□□ -2.34
RNU6-1000P-201ENST00000391066 OSTCQ9NRP0 149 aa0.41□□□□□ -2.34
RNU6-1000P-201ENST00000391066 NHP2Q9NX24 153 aaKnown RBP0.41□□□□□ -2.34
RNU6-1000P-201ENST00000391066 DOCK5Q9H7D0 1870 aa0.41□□□□□ -2.34
RNU6-1000P-201ENST00000391066 NEO1Q92859 1461 aa0.41□□□□□ -2.34
RNU6-1000P-201ENST00000391066 MUC5BQ9HC84 5762 aaPredicted RBP0.41□□□□□ -2.34
RNU6-1000P-201ENST00000391066 ECM29Q5VYK3 1845 aa0.41□□□□□ -2.34
RNU6-1000P-201ENST00000391066 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.4□□□□□ -2.35
RNU6-1000P-201ENST00000391066 CCDC160A6NGH7 325 aa0.4□□□□□ -2.35
RNU6-1000P-201ENST00000391066 ACOT6Q3I5F7 207 aaPredicted RBP0.4□□□□□ -2.35
RNU6-1000P-201ENST00000391066 SPOPLQ6IQ16 392 aa0.4□□□□□ -2.35
RNU6-1000P-201ENST00000391066 TEX261Q6UWH6 196 aa0.4□□□□□ -2.35
RNU6-1000P-201ENST00000391066 C20orf27Q9GZN8 174 aa0.4□□□□□ -2.35
RNU6-1000P-201ENST00000391066 MRPL27Q9P0M9 148 aaKnown RBP0.4□□□□□ -2.35
RNU6-1000P-201ENST00000391066 GUCA1BQ9UMX6 200 aa0.4□□□□□ -2.35
RNU6-1000P-201ENST00000391066 SLC35A3Q9Y2D2 325 aa0.4□□□□□ -2.35
RNU6-1000P-201ENST00000391066 U3KQ87 197 aa0.4□□□□□ -2.35
RNU6-1000P-201ENST00000391066 SBF1O95248 1867 aa0.39□□□□□ -2.35
RNU6-1000P-201ENST00000391066 COTL1Q14019 142 aa0.39□□□□□ -2.35
RNU6-1000P-201ENST00000391066 TRAPPC6BQ86SZ2 158 aa0.39□□□□□ -2.35
RNU6-1000P-201ENST00000391066 C4orf3Q8WVX3 66 aa0.39□□□□□ -2.35
RNU6-1000P-201ENST00000391066 DCSTAMPQ9H295 470 aa0.39□□□□□ -2.35
RNU6-1000P-201ENST00000391066 C10orf95Q9H7T3 257 aa0.39□□□□□ -2.35
RNU6-1000P-201ENST00000391066 ZFC3H1O60293 1989 aaKnown RBP0.39□□□□□ -2.35
RNU6-1000P-201ENST00000391066 CRYZL1O95825 349 aa0.38□□□□□ -2.35
RNU6-1000P-201ENST00000391066 IFNA5P01569 189 aa0.38□□□□□ -2.35
RNU6-1000P-201ENST00000391066 SMIM10L2AP0DMW4 78 aa0.38□□□□□ -2.35
RNU6-1000P-201ENST00000391066 SMIM10L2BP0DMW5 78 aa0.38□□□□□ -2.35
RNU6-1000P-201ENST00000391066 SULT1A1P50225 295 aa0.38□□□□□ -2.35
RNU6-1000P-201ENST00000391066 NKX2-5P52952 324 aaPredicted RBP0.38□□□□□ -2.35
RNU6-1000P-201ENST00000391066 DEFA1P59665 94 aa0.38□□□□□ -2.35
RNU6-1000P-201ENST00000391066 SRSF6Q13247 344 aaKnown RBP0.38□□□□□ -2.35
RNU6-1000P-201ENST00000391066 LINC01554Q52M75 96 aa0.38□□□□□ -2.35
RNU6-1000P-201ENST00000391066 OR51V1Q9H2C8 321 aa0.38□□□□□ -2.35
RNU6-1000P-201ENST00000391066 TRAV26-2A0A0B4J265 109 aa0.37□□□□□ -2.35
RNU6-1000P-201ENST00000391066 OR4C46A6NHA9 309 aa0.37□□□□□ -2.35
RNU6-1000P-201ENST00000391066 CHP2O43745 196 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms