RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 CORTO00230 105 aa6.3□□□□□ -1.4
ERCC8-202ENST00000381118 HOXA3O43365 443 aaPredicted RBP6.3□□□□□ -1.4
ERCC8-202ENST00000381118 OR10J1P30954 320 aa6.3□□□□□ -1.4
ERCC8-202ENST00000381118 GPX4P36969 197 aaPredicted RBP6.3□□□□□ -1.4
ERCC8-202ENST00000381118 FGF8P55075 233 aaPredicted RBP6.3□□□□□ -1.4
ERCC8-202ENST00000381118 B2MP61769 119 aa6.3□□□□□ -1.4
ERCC8-202ENST00000381118 KRTAP1-1Q07627 177 aa6.3□□□□□ -1.4
ERCC8-202ENST00000381118 TMEM41BQ5BJD5 291 aa6.3□□□□□ -1.4
ERCC8-202ENST00000381118 Q6ZS46 218 aa6.3□□□□□ -1.4
ERCC8-202ENST00000381118 STPG3Q8N7X2 389 aa6.3□□□□□ -1.4
ERCC8-202ENST00000381118 BPIFCQ8NFQ6 507 aa6.3□□□□□ -1.4
ERCC8-202ENST00000381118 SFT2D1Q8WV19 159 aa6.3□□□□□ -1.4
ERCC8-202ENST00000381118 CACNG8Q8WXS5 425 aa6.3□□□□□ -1.4
ERCC8-202ENST00000381118 SLC25A22Q9H936 323 aa6.3□□□□□ -1.4
ERCC8-202ENST00000381118 BTBD17A6NE02 478 aa6.29□□□□□ -1.4
ERCC8-202ENST00000381118 NPIPB5A8MRT5 1133 aa6.29□□□□□ -1.4
ERCC8-202ENST00000381118 FNDC10F2Z333 226 aa6.29□□□□□ -1.4
ERCC8-202ENST00000381118 OR2J3O76001 311 aa6.29□□□□□ -1.4
ERCC8-202ENST00000381118 TSPAN15O95858 294 aa6.29□□□□□ -1.4
ERCC8-202ENST00000381118 IGHV3-23P01764 117 aa6.29□□□□□ -1.4
ERCC8-202ENST00000381118 CRYGCP07315 174 aa6.29□□□□□ -1.4
ERCC8-202ENST00000381118 H2AFB1P0C5Y9 115 aa6.29□□□□□ -1.4
ERCC8-202ENST00000381118 SRP14P37108 136 aaKnown RBP6.29□□□□□ -1.4
ERCC8-202ENST00000381118 ZNF90Q03938 601 aa6.29□□□□□ -1.4
ERCC8-202ENST00000381118 RAB31Q13636 194 aa6.29□□□□□ -1.4
ERCC8-202ENST00000381118 ZNF726P1Q15940 193 aa6.29□□□□□ -1.4
ERCC8-202ENST00000381118 ETFRF1Q6IPR1 90 aa6.29□□□□□ -1.4
ERCC8-202ENST00000381118 FAM122CQ6P4D5 195 aa6.29□□□□□ -1.4
ERCC8-202ENST00000381118 LCN15Q6UWW0 184 aa6.29□□□□□ -1.4
ERCC8-202ENST00000381118 CENPVQ7Z7K6 275 aaPredicted RBP6.29□□□□□ -1.4
ERCC8-202ENST00000381118 RPP25LQ8N5L8 163 aaKnown RBP6.29□□□□□ -1.4
ERCC8-202ENST00000381118 TTC9CQ8N5M4 171 aa6.29□□□□□ -1.4
ERCC8-202ENST00000381118 OR10G4Q8NGN3 311 aa6.29□□□□□ -1.4
ERCC8-202ENST00000381118 OR10G9Q8NGN4 311 aa6.29□□□□□ -1.4
ERCC8-202ENST00000381118 OR10G7Q8NGN6 311 aa6.29□□□□□ -1.4
ERCC8-202ENST00000381118 NOL4LQ96MY1 436 aaPredicted RBP6.29□□□□□ -1.4
ERCC8-202ENST00000381118 FLNBO75369 2602 aaKnown RBP6.29□□□□□ -1.4
ERCC8-202ENST00000381118 I3L2K1 104 aa6.29□□□□□ -1.4
ERCC8-202ENST00000381118 CD5LO43866 347 aa6.29□□□□□ -1.4
ERCC8-202ENST00000381118 AANATQ16613 207 aa6.29□□□□□ -1.4
ERCC8-202ENST00000381118 PVRIGQ6DKI7 326 aa6.29□□□□□ -1.4
ERCC8-202ENST00000381118 Q6YL49 198 aa6.29□□□□□ -1.4
ERCC8-202ENST00000381118 C9orf139Q6ZV77 190 aa6.29□□□□□ -1.4
ERCC8-202ENST00000381118 SLC35E3Q7Z769 313 aa6.29□□□□□ -1.4
ERCC8-202ENST00000381118 FANCD2OSQ96PS1 177 aa6.29□□□□□ -1.4
ERCC8-202ENST00000381118 TMEM231Q9H6L2 316 aa6.29□□□□□ -1.4
ERCC8-202ENST00000381118 MTORP42345 2549 aa6.28□□□□□ -1.4
ERCC8-202ENST00000381118 IGLV11-55A0A075B6I3 123 aa6.28□□□□□ -1.4
ERCC8-202ENST00000381118 MFSD2BA6NFX1 497 aa6.28□□□□□ -1.4
ERCC8-202ENST00000381118 I3L521 148 aa6.28□□□□□ -1.4
ERCC8-202ENST00000381118 K7EIM0 57 aa6.28□□□□□ -1.4
ERCC8-202ENST00000381118 YIF1AO95070 293 aa6.28□□□□□ -1.4
ERCC8-202ENST00000381118 M6PRP20645 277 aa6.28□□□□□ -1.4
ERCC8-202ENST00000381118 SRSF3P84103 164 aaKnown RBP6.28□□□□□ -1.4
ERCC8-202ENST00000381118 TMEM95Q3KNT9 176 aa6.28□□□□□ -1.4
ERCC8-202ENST00000381118 SIGLECL1Q8N7X8 197 aa6.28□□□□□ -1.4
ERCC8-202ENST00000381118 MARC2Q969Z3 335 aa6.28□□□□□ -1.4
ERCC8-202ENST00000381118 RCC1LQ96I51 464 aaKnown RBP6.28□□□□□ -1.4
ERCC8-202ENST00000381118 MS4A10Q96PG2 267 aa6.28□□□□□ -1.4
ERCC8-202ENST00000381118 SLC39A9Q9NUM3 307 aa6.28□□□□□ -1.4
ERCC8-202ENST00000381118 VPREB3Q9UKI3 123 aa6.28□□□□□ -1.4
ERCC8-202ENST00000381118 IGKV1D-37A0A075B6S9 117 aa6.27□□□□□ -1.4
ERCC8-202ENST00000381118 TRAV41A0A0B4J266 112 aa6.27□□□□□ -1.4
ERCC8-202ENST00000381118 M0QZK8 103 aa6.27□□□□□ -1.4
ERCC8-202ENST00000381118 MBP02144 154 aa6.27□□□□□ -1.4
ERCC8-202ENST00000381118 RPL29P47914 159 aaKnown RBP6.27□□□□□ -1.4
ERCC8-202ENST00000381118 CDC34P49427 236 aaPredicted RBP6.27□□□□□ -1.4
ERCC8-202ENST00000381118 CCL20P78556 96 aa6.27□□□□□ -1.4
ERCC8-202ENST00000381118 ACOT6Q3I5F7 207 aaPredicted RBP6.27□□□□□ -1.4
ERCC8-202ENST00000381118 AKIRIN2Q53H80 203 aa6.27□□□□□ -1.4
ERCC8-202ENST00000381118 DPPA3Q6W0C5 159 aa6.27□□□□□ -1.4
ERCC8-202ENST00000381118 CYP2G1PQ6ZSU1 146 aa6.27□□□□□ -1.4
ERCC8-202ENST00000381118 IQCF2Q8IXL9 164 aa6.27□□□□□ -1.4
ERCC8-202ENST00000381118 TMEM116Q8NCL8 245 aa6.27□□□□□ -1.4
ERCC8-202ENST00000381118 OR1L6Q8NGR2 347 aa6.27□□□□□ -1.4
ERCC8-202ENST00000381118 OR5R1Q8NH85 324 aa6.27□□□□□ -1.4
ERCC8-202ENST00000381118 FAM110DQ8TAY7 271 aaPredicted RBP6.27□□□□□ -1.4
ERCC8-202ENST00000381118 MED9Q9NWA0 146 aa6.27□□□□□ -1.4
ERCC8-202ENST00000381118 THYN1Q9P016 225 aa6.27□□□□□ -1.4
ERCC8-202ENST00000381118 DOK5Q9P104 306 aa6.27□□□□□ -1.4
ERCC8-202ENST00000381118 SLC45A2Q9UMX9 530 aa6.27□□□□□ -1.4
ERCC8-202ENST00000381118 TCRBV4S1A1TA0A5B7 111 aa6.27□□□□□ -1.41
ERCC8-202ENST00000381118 MAP1LC3B2A6NCE7 125 aa6.27□□□□□ -1.41
ERCC8-202ENST00000381118 CYB5BO43169 146 aa6.27□□□□□ -1.41
ERCC8-202ENST00000381118 SOX15O60248 233 aa6.27□□□□□ -1.41
ERCC8-202ENST00000381118 NDUFB8O95169 186 aa6.27□□□□□ -1.41
ERCC8-202ENST00000381118 IGHG2P01859 326 aa6.27□□□□□ -1.41
ERCC8-202ENST00000381118 LINC00869P0C866 280 aa6.27□□□□□ -1.41
ERCC8-202ENST00000381118 PRR20EP86478 221 aa6.27□□□□□ -1.41
ERCC8-202ENST00000381118 PRR20CP86479 221 aa6.27□□□□□ -1.41
ERCC8-202ENST00000381118 PRR20DP86480 221 aa6.27□□□□□ -1.41
ERCC8-202ENST00000381118 PRR20BP86481 221 aa6.27□□□□□ -1.41
ERCC8-202ENST00000381118 PRR20AP86496 221 aa6.27□□□□□ -1.41
ERCC8-202ENST00000381118 SPSB3Q6PJ21 355 aa6.27□□□□□ -1.41
ERCC8-202ENST00000381118 Q71RC1 249 aaPredicted RBP6.27□□□□□ -1.41
ERCC8-202ENST00000381118 C16orf82Q7Z2V1 217 aa6.27□□□□□ -1.41
ERCC8-202ENST00000381118 LYPD6BQ8NI32 183 aa6.27□□□□□ -1.41
ERCC8-202ENST00000381118 NARS2Q96I59 477 aaKnown RBP6.27□□□□□ -1.41
ERCC8-202ENST00000381118 MAP1LC3BQ9GZQ8 125 aa6.27□□□□□ -1.41
ERCC8-202ENST00000381118 SEPSECSQ9HD40 501 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms