RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 RND2P52198 227 aa15.78■□□□□ 0.12
PDLIM5-205ENST00000380180 FAM78BQ5VT40 261 aa15.78■□□□□ 0.12
PDLIM5-205ENST00000380180 PIP4P2Q8N4L2 257 aa15.78■□□□□ 0.12
PDLIM5-205ENST00000380180 SRSF8Q9BRL6 282 aaKnown RBP15.78■□□□□ 0.12
PDLIM5-205ENST00000380180 NIPSNAP3BQ9BS92 247 aa15.78■□□□□ 0.12
PDLIM5-205ENST00000380180 IGKV1D-37A0A075B6S9 117 aa15.77■□□□□ 0.12
PDLIM5-205ENST00000380180 TMEM11P17152 192 aa15.77■□□□□ 0.12
PDLIM5-205ENST00000380180 THAP8Q8NA92 274 aa15.77■□□□□ 0.12
PDLIM5-205ENST00000380180 MAP1AP78559 2803 aaPredicted RBP15.77■□□□□ 0.11
PDLIM5-205ENST00000380180 ANKRD17O75179 2603 aaKnown RBP15.77■□□□□ 0.11
PDLIM5-205ENST00000380180 CORTO00230 105 aa15.77■□□□□ 0.11
PDLIM5-205ENST00000380180 NPFFO15130 113 aa15.77■□□□□ 0.11
PDLIM5-205ENST00000380180 FAM120AOSQ5T036 256 aa15.77■□□□□ 0.11
PDLIM5-205ENST00000380180 OR4F5Q8NH21 305 aa15.77■□□□□ 0.11
PDLIM5-205ENST00000380180 OR4F4Q96R69 305 aa15.77■□□□□ 0.11
PDLIM5-205ENST00000380180 FAM103A1Q9BTL3 118 aaKnown RBP15.77■□□□□ 0.11
PDLIM5-205ENST00000380180 IGHV3-21A0A0B4J1V1 117 aa15.76■□□□□ 0.11
PDLIM5-205ENST00000380180 FAM106CPP0CH98 169 aa15.76■□□□□ 0.11
PDLIM5-205ENST00000380180 ZNF90Q03938 601 aa15.76■□□□□ 0.11
PDLIM5-205ENST00000380180 RHEBQ15382 184 aa15.76■□□□□ 0.11
PDLIM5-205ENST00000380180 MIR17HGQ75NE6 70 aa15.76■□□□□ 0.11
PDLIM5-205ENST00000380180 TVP23CQ96ET8 276 aa15.76■□□□□ 0.11
PDLIM5-205ENST00000380180 WNT10AQ9GZT5 417 aa15.76■□□□□ 0.11
PDLIM5-205ENST00000380180 TCRBV4S1A1TA0A5B7 111 aa15.75■□□□□ 0.11
PDLIM5-205ENST00000380180 MT-CO2P00403 227 aa15.75■□□□□ 0.11
PDLIM5-205ENST00000380180 PAX1P15863 534 aa15.75■□□□□ 0.11
PDLIM5-205ENST00000380180 UBE2G2P60604 165 aa15.75■□□□□ 0.11
PDLIM5-205ENST00000380180 C19orf24Q9BVV8 132 aa15.75■□□□□ 0.11
PDLIM5-205ENST00000380180 SMCO4Q9NRQ5 59 aa15.75■□□□□ 0.11
PDLIM5-205ENST00000380180 FUT9Q9Y231 359 aa15.75■□□□□ 0.11
PDLIM5-205ENST00000380180 CELSR2Q9HCU4 2923 aa15.75■□□□□ 0.11
PDLIM5-205ENST00000380180 CSMD1Q96PZ7 3565 aa15.75■□□□□ 0.11
PDLIM5-205ENST00000380180 CTRB1P17538 263 aa15.75■□□□□ 0.11
PDLIM5-205ENST00000380180 BRS3P32247 399 aa15.75■□□□□ 0.11
PDLIM5-205ENST00000380180 CTRB2Q6GPI1 263 aa15.75■□□□□ 0.11
PDLIM5-205ENST00000380180 ZNF562Q6V9R5 426 aa15.75■□□□□ 0.11
PDLIM5-205ENST00000380180 NANPQ8TBE9 248 aa15.75■□□□□ 0.11
PDLIM5-205ENST00000380180 TMEM37Q8WXS4 190 aa15.75■□□□□ 0.11
PDLIM5-205ENST00000380180 C11orf94C9JXX5 98 aa15.74■□□□□ 0.11
PDLIM5-205ENST00000380180 TMEM250H0YL14 139 aa15.74■□□□□ 0.11
PDLIM5-205ENST00000380180 CX3CL1P78423 397 aa15.74■□□□□ 0.11
PDLIM5-205ENST00000380180 TMEM116Q8NCL8 245 aa15.74■□□□□ 0.11
PDLIM5-205ENST00000380180 PSMB11A5LHX3 300 aa15.73■□□□□ 0.11
PDLIM5-205ENST00000380180 OR5G3P0C626 314 aa15.73■□□□□ 0.11
PDLIM5-205ENST00000380180 GCHFRP30047 84 aa15.73■□□□□ 0.11
PDLIM5-205ENST00000380180 CENPEQ02224 2701 aa15.73■□□□□ 0.11
PDLIM5-205ENST00000380180 CST9LP1Q5W188 147 aa15.73■□□□□ 0.11
PDLIM5-205ENST00000380180 ZNF727A8MUV8 499 aa15.73■□□□□ 0.11
PDLIM5-205ENST00000380180 NDUFS6O75380 124 aaKnown RBP15.73■□□□□ 0.11
PDLIM5-205ENST00000380180 COL8A1P27658 744 aa15.73■□□□□ 0.11
PDLIM5-205ENST00000380180 DSCR9P59020 149 aa15.73■□□□□ 0.11
PDLIM5-205ENST00000380180 C22orf15Q8WYQ4 148 aa15.73■□□□□ 0.11
PDLIM5-205ENST00000380180 DNAJC4Q9NNZ3 241 aa15.73■□□□□ 0.11
PDLIM5-205ENST00000380180 TNFRSF19Q9NS68 423 aa15.73■□□□□ 0.11
PDLIM5-205ENST00000380180 IGHV3OR16-10A0A075B7F0 116 aa15.72■□□□□ 0.11
PDLIM5-205ENST00000380180 ATP5G3P48201 142 aa15.72■□□□□ 0.11
PDLIM5-205ENST00000380180 SELENOTP62341 195 aa15.72■□□□□ 0.11
PDLIM5-205ENST00000380180 RPUSD4Q96CM3 377 aaKnown RBP15.72■□□□□ 0.11
PDLIM5-205ENST00000380180 I3L2K1 104 aa15.72■□□□□ 0.11
PDLIM5-205ENST00000380180 NDPQ00604 133 aa15.72■□□□□ 0.11
PDLIM5-205ENST00000380180 CLEC12BQ2HXU8 276 aa15.72■□□□□ 0.11
PDLIM5-205ENST00000380180 ZNF674Q2M3X9 581 aa15.72■□□□□ 0.11
PDLIM5-205ENST00000380180 Q8N9W7 124 aa15.72■□□□□ 0.11
PDLIM5-205ENST00000380180 ARPC1AQ92747 370 aa15.72■□□□□ 0.11
PDLIM5-205ENST00000380180 SDF2L1Q9HCN8 221 aa15.72■□□□□ 0.11
PDLIM5-205ENST00000380180 TECRQ9NZ01 308 aaKnown RBP15.72■□□□□ 0.11
PDLIM5-205ENST00000380180 C1RLQ9NZP8 487 aa15.72■□□□□ 0.11
PDLIM5-205ENST00000380180 FBN2P35556 2912 aa15.71■□□□□ 0.11
PDLIM5-205ENST00000380180 KIAA0141Q14154 515 aaPredicted RBP15.71■□□□□ 0.11
PDLIM5-205ENST00000380180 ASPHD1Q5U4P2 390 aa15.71■□□□□ 0.11
PDLIM5-205ENST00000380180 TRGV9Q99603 122 aa15.71■□□□□ 0.11
PDLIM5-205ENST00000380180 SMIM7Q9BQ49 75 aa15.71■□□□□ 0.11
PDLIM5-205ENST00000380180 DOK5Q9P104 306 aa15.71■□□□□ 0.11
PDLIM5-205ENST00000380180 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.71■□□□□ 0.14e-6■□□□□ 9.7
PDLIM5-205ENST00000380180 IGHV1-69DA0A0B4J2H0 117 aa15.7■□□□□ 0.1
PDLIM5-205ENST00000380180 IGHV1-69P01742 117 aa15.7■□□□□ 0.1
PDLIM5-205ENST00000380180 MSMBP08118 114 aa15.7■□□□□ 0.1
PDLIM5-205ENST00000380180 NPPCP23582 126 aa15.7■□□□□ 0.1
PDLIM5-205ENST00000380180 OR4X1Q8NH49 305 aa15.7■□□□□ 0.1
PDLIM5-205ENST00000380180 PARLQ9H300 379 aa15.7■□□□□ 0.1
PDLIM5-205ENST00000380180 CSMD2Q7Z408 3487 aa15.7■□□□□ 0.1
PDLIM5-205ENST00000380180 TRAV40A0A0B4J280 105 aa15.7■□□□□ 0.1
PDLIM5-205ENST00000380180 COLCA2A8K830 154 aa15.7■□□□□ 0.1
PDLIM5-205ENST00000380180 CLN5O75503 358 aa15.7■□□□□ 0.1
PDLIM5-205ENST00000380180 ATF4P18848 351 aaPredicted RBP15.7■□□□□ 0.1
PDLIM5-205ENST00000380180 KLF17Q5JT82 389 aaPredicted RBP15.7■□□□□ 0.1
PDLIM5-205ENST00000380180 PATE2Q6UY27 113 aa15.7■□□□□ 0.1
PDLIM5-205ENST00000380180 OR51G1Q8NGK1 321 aa15.7■□□□□ 0.1
PDLIM5-205ENST00000380180 ISOC2Q96AB3 205 aa15.7■□□□□ 0.1
PDLIM5-205ENST00000380180 ZNF503Q96F45 646 aa15.7■□□□□ 0.1
PDLIM5-205ENST00000380180 GSX1Q9H4S2 264 aaPredicted RBP15.7■□□□□ 0.1
PDLIM5-205ENST00000380180 TUBA4BQ9H853 241 aa15.7■□□□□ 0.1
PDLIM5-205ENST00000380180 YTHDF2Q9Y5A9 579 aaKnown RBP15.7■□□□□ 0.1
PDLIM5-205ENST00000380180 CELSR1Q9NYQ6 3014 aa15.69■□□□□ 0.1
PDLIM5-205ENST00000380180 USP9YO00507 2555 aaPredicted RBP15.69■□□□□ 0.1
PDLIM5-205ENST00000380180 POLQO75417 2590 aa15.69■□□□□ 0.1
PDLIM5-205ENST00000380180 PDE6DO43924 150 aa15.69■□□□□ 0.1
PDLIM5-205ENST00000380180 COX7A2P2O60397 106 aa15.69■□□□□ 0.1
PDLIM5-205ENST00000380180 PNRC1Q12796 327 aaPredicted RBP15.69■□□□□ 0.1
PDLIM5-205ENST00000380180 MORN5Q5VZ52 161 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms