RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 HEATR1Q9H583 2144 aaKnown RBP10.05□□□□□ -0.8
PCDHA9-201ENST00000378122 LYPD3O95274 346 aa10.05□□□□□ -0.8
PCDHA9-201ENST00000378122 SNRPD3P62318 126 aaKnown RBP10.05□□□□□ -0.8
PCDHA9-201ENST00000378122 CEP290O15078 2479 aa10.04□□□□□ -0.8
PCDHA9-201ENST00000378122 TRAV24A0A0B4J272 114 aa10.04□□□□□ -0.8
PCDHA9-201ENST00000378122 IGKV1D-13A0A0B4J2D9 117 aa10.04□□□□□ -0.8
PCDHA9-201ENST00000378122 CELA3BP08861 270 aa10.04□□□□□ -0.8
PCDHA9-201ENST00000378122 IGKV1-13P0DP09 117 aa10.04□□□□□ -0.8
PCDHA9-201ENST00000378122 CLEC19AQ6UXS0 136 aa10.04□□□□□ -0.8
PCDHA9-201ENST00000378122 LHFPL4Q7Z7J7 247 aa10.04□□□□□ -0.8
PCDHA9-201ENST00000378122 Q9H3A6 140 aa10.04□□□□□ -0.8
PCDHA9-201ENST00000378122 HIGD1CA8MV81 97 aa10.04□□□□□ -0.8
PCDHA9-201ENST00000378122 TTC9CQ8N5M4 171 aa10.04□□□□□ -0.8
PCDHA9-201ENST00000378122 REG4Q9BYZ8 158 aa10.04□□□□□ -0.8
PCDHA9-201ENST00000378122 LCTP09848 1927 aa10.04□□□□□ -0.8
PCDHA9-201ENST00000378122 COL6A6A6NMZ7 2263 aa10.04□□□□□ -0.8
PCDHA9-201ENST00000378122 ZNF703Q9H7S9 590 aaPredicted RBP10.04□□□□□ -0.8
PCDHA9-201ENST00000378122 MYO7BQ6PIF6 2116 aa10.04□□□□□ -0.8
PCDHA9-201ENST00000378122 XIRP1Q702N8 1843 aaKnown RBP10.04□□□□□ -0.8
PCDHA9-201ENST00000378122 PGPEP1LA6NFU8 196 aa10.04□□□□□ -0.8
PCDHA9-201ENST00000378122 RAMP3O60896 148 aa10.04□□□□□ -0.8
PCDHA9-201ENST00000378122 LEPP41159 167 aa10.04□□□□□ -0.8
PCDHA9-201ENST00000378122 HIST3H2BBQ8N257 126 aa10.04□□□□□ -0.8
PCDHA9-201ENST00000378122 KIR2DL4Q99706 377 aa10.04□□□□□ -0.8
PCDHA9-201ENST00000378122 HIST1H2BLQ99880 126 aa10.04□□□□□ -0.8
PCDHA9-201ENST00000378122 VSIRQ9H7M9 311 aa10.04□□□□□ -0.8
PCDHA9-201ENST00000378122 CD59P13987 128 aa10.04□□□□□ -0.8
PCDHA9-201ENST00000378122 CA7P43166 264 aa10.04□□□□□ -0.8
PCDHA9-201ENST00000378122 SCGB3A1Q96QR1 104 aa10.04□□□□□ -0.8
PCDHA9-201ENST00000378122 MRPL20Q9BYC9 149 aaKnown RBP10.04□□□□□ -0.8
PCDHA9-201ENST00000378122 FBXL15Q9H469 300 aa10.04□□□□□ -0.8
PCDHA9-201ENST00000378122 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.04□□□□□ -0.8
PCDHA9-201ENST00000378122 COLCA2A8K830 154 aa10.03□□□□□ -0.8
PCDHA9-201ENST00000378122 PRSS22Q9GZN4 317 aa10.03□□□□□ -0.8
PCDHA9-201ENST00000378122 M0R381 172 aa10.03□□□□□ -0.8
PCDHA9-201ENST00000378122 OR52E5Q8NH55 327 aa10.03□□□□□ -0.8
PCDHA9-201ENST00000378122 GEMIN7Q9H840 131 aaKnown RBP10.03□□□□□ -0.8
PCDHA9-201ENST00000378122 FAM159AQ6UWV7 190 aa10.03□□□□□ -0.8
PCDHA9-201ENST00000378122 NEUROG1Q92886 237 aa10.03□□□□□ -0.8
PCDHA9-201ENST00000378122 FANCMQ8IYD8 2048 aa10.03□□□□□ -0.8
PCDHA9-201ENST00000378122 IGKV1D-33P01593 117 aa10.03□□□□□ -0.8
PCDHA9-201ENST00000378122 IGKV1-33P01594 117 aa10.03□□□□□ -0.8
PCDHA9-201ENST00000378122 SAPCD1Q5SSQ6 148 aa10.03□□□□□ -0.8
PCDHA9-201ENST00000378122 NUDT10Q8NFP7 164 aa10.03□□□□□ -0.8
PCDHA9-201ENST00000378122 NUDT11Q96G61 164 aa10.03□□□□□ -0.8
PCDHA9-201ENST00000378122 DOCK3Q8IZD9 2030 aa10.03□□□□□ -0.8
PCDHA9-201ENST00000378122 IGHV3-73A0A0B4J1V6 119 aa10.03□□□□□ -0.8
PCDHA9-201ENST00000378122 A0A1W2PR77 199 aa10.03□□□□□ -0.8
PCDHA9-201ENST00000378122 TMEM30BQ3MIR4 351 aa10.03□□□□□ -0.8
PCDHA9-201ENST00000378122 TMEM219Q86XT9 240 aa10.03□□□□□ -0.8
PCDHA9-201ENST00000378122 A0A1B0GUT8 65 aa10.02□□□□□ -0.8
PCDHA9-201ENST00000378122 SRSF4Q08170 494 aaKnown RBP10.02□□□□□ -0.8
PCDHA9-201ENST00000378122 Q6ZT83 130 aa10.02□□□□□ -0.8
PCDHA9-201ENST00000378122 MEGF9Q9H1U4 602 aa10.02□□□□□ -0.8
PCDHA9-201ENST00000378122 TMEM106BQ9NUM4 274 aa10.02□□□□□ -0.8
PCDHA9-201ENST00000378122 CGB7P0DN87 165 aa10.02□□□□□ -0.81
PCDHA9-201ENST00000378122 OR10J3Q5JRS4 329 aa10.02□□□□□ -0.81
PCDHA9-201ENST00000378122 FAM216BQ8N7L0 139 aa10.02□□□□□ -0.81
PCDHA9-201ENST00000378122 A0A0U1RRA0 63 aa10.02□□□□□ -0.81
PCDHA9-201ENST00000378122 CECR9P0C854 216 aa10.02□□□□□ -0.81
PCDHA9-201ENST00000378122 FAM169BQ8N8A8 192 aa10.02□□□□□ -0.81
PCDHA9-201ENST00000378122 PRDM13Q9H4Q3 707 aa10.02□□□□□ -0.81
PCDHA9-201ENST00000378122 DOCK8Q8NF50 2099 aa10.02□□□□□ -0.81
PCDHA9-201ENST00000378122 APOMO95445 188 aa10.02□□□□□ -0.81
PCDHA9-201ENST00000378122 CLPSP04118 112 aa10.02□□□□□ -0.81
PCDHA9-201ENST00000378122 DEPPQ9NTK1 212 aa10.02□□□□□ -0.81
PCDHA9-201ENST00000378122 OR5A1Q8NGJ0 315 aa10.01□□□□□ -0.81
PCDHA9-201ENST00000378122 IGHV3-53P01767 116 aa10.01□□□□□ -0.81
PCDHA9-201ENST00000378122 CD5P06127 495 aa10.01□□□□□ -0.81
PCDHA9-201ENST00000378122 IGHV1-2P23083 117 aa10.01□□□□□ -0.81
PCDHA9-201ENST00000378122 MSRB2Q9Y3D2 182 aa10.01□□□□□ -0.81
PCDHA9-201ENST00000378122 THBDP07204 575 aa10.01□□□□□ -0.81
PCDHA9-201ENST00000378122 ZNF883P0CG24 379 aa10.01□□□□□ -0.81
PCDHA9-201ENST00000378122 ASIPP42127 132 aa10.01□□□□□ -0.81
PCDHA9-201ENST00000378122 PEMTQ9UBM1 199 aa10.01□□□□□ -0.81
PCDHA9-201ENST00000378122 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.01□□□□□ -0.81
PCDHA9-201ENST00000378122 SPOCK3Q9BQ16 436 aa10.01□□□□□ -0.81
PCDHA9-201ENST00000378122 ATP5LO75964 103 aa10.01□□□□□ -0.81
PCDHA9-201ENST00000378122 DNM1P46Q6ZS02 220 aa10.01□□□□□ -0.81
PCDHA9-201ENST00000378122 PAQR4Q8N4S7 273 aaPredicted RBP10.01□□□□□ -0.81
PCDHA9-201ENST00000378122 TRAV9-2A0A087WT02 112 aa10□□□□□ -0.81
PCDHA9-201ENST00000378122 SAA2-SAA4A0A096LPE2 208 aa10□□□□□ -0.81
PCDHA9-201ENST00000378122 KBTBD11-OT1A0A1B0GTJ5 212 aa10□□□□□ -0.81
PCDHA9-201ENST00000378122 SAA2P0DJI9 122 aaPredicted RBP10□□□□□ -0.81
PCDHA9-201ENST00000378122 C5orf30Q96GV9 206 aa10□□□□□ -0.81
PCDHA9-201ENST00000378122 CYTL1Q9NRR1 136 aa10□□□□□ -0.81
PCDHA9-201ENST00000378122 IGKV1D-8A0A087WSZ0 117 aa10□□□□□ -0.81
PCDHA9-201ENST00000378122 IGKV1-9A0A0C4DH69 117 aa10□□□□□ -0.81
PCDHA9-201ENST00000378122 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10□□□□□ -0.81
PCDHA9-201ENST00000378122 IGHV4-39P01824 125 aa10□□□□□ -0.81
PCDHA9-201ENST00000378122 TRBV6-7A0A0A0MS04 114 aa10□□□□□ -0.81
PCDHA9-201ENST00000378122 MRPS16Q9Y3D3 137 aaKnown RBP10□□□□□ -0.81
PCDHA9-201ENST00000378122 GREB1Q4ZG55 1949 aa10□□□□□ -0.81
PCDHA9-201ENST00000378122 SPTA1P02549 2419 aa10□□□□□ -0.81
PCDHA9-201ENST00000378122 AMBPP02760 352 aa10□□□□□ -0.81
PCDHA9-201ENST00000378122 OSR1Q8TAX0 266 aaPredicted RBP10□□□□□ -0.81
PCDHA9-201ENST00000378122 GAS1P54826 345 aa10□□□□□ -0.81
PCDHA9-201ENST00000378122 FER1L6-AS1Q8NA97 138 aa10□□□□□ -0.81
PCDHA9-201ENST00000378122 FBXL7Q9UJT9 491 aa10□□□□□ -0.81
PCDHA9-201ENST00000378122 IGHV2OR16-5A0A0B4J2B6 119 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms