RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 PSG7Q13046 419 aa9.05□□□□□ -0.96
HIF3A-205ENST00000377670 USF3Q68DE3 2245 aa9.05□□□□□ -0.96
HIF3A-205ENST00000377670 GLRX5Q86SX6 157 aa9.05□□□□□ -0.96
HIF3A-205ENST00000377670 TMEM101Q96IK0 257 aa9.05□□□□□ -0.96
HIF3A-205ENST00000377670 VENTXO95231 258 aa9.04□□□□□ -0.96
HIF3A-205ENST00000377670 CLPSP04118 112 aa9.04□□□□□ -0.96
HIF3A-205ENST00000377670 PRB3Q04118 309 aaPredicted RBP9.04□□□□□ -0.96
HIF3A-205ENST00000377670 VKORC1L1Q8N0U8 176 aa9.04□□□□□ -0.96
HIF3A-205ENST00000377670 NDUFAF3Q9BU61 184 aa9.04□□□□□ -0.96
HIF3A-205ENST00000377670 DERL1Q9BUN8 251 aa9.04□□□□□ -0.96
HIF3A-205ENST00000377670 MKI67P46013 3256 aaKnown RBP9.04□□□□□ -0.96
HIF3A-205ENST00000377670 A0A0G2JK05 382 aa9.04□□□□□ -0.96
HIF3A-205ENST00000377670 MARCH11A6NNE9 402 aa9.04□□□□□ -0.96
HIF3A-205ENST00000377670 TMEM14DPA8MWL7 114 aa9.04□□□□□ -0.96
HIF3A-205ENST00000377670 MBNL2Q5VZF2 373 aaKnown RBP9.04□□□□□ -0.96
HIF3A-205ENST00000377670 FAM19A2Q8N3H0 131 aa9.04□□□□□ -0.96
HIF3A-205ENST00000377670 FGFBP3Q8TAT2 258 aa9.04□□□□□ -0.96
HIF3A-205ENST00000377670 ZNF319Q9P2F9 582 aa9.04□□□□□ -0.96
HIF3A-205ENST00000377670 TMEM250H0YL14 139 aa9.04□□□□□ -0.96
HIF3A-205ENST00000377670 HSPE1P61604 102 aaKnown RBP9.04□□□□□ -0.96
HIF3A-205ENST00000377670 HBBP68871 147 aa9.04□□□□□ -0.96
HIF3A-205ENST00000377670 JOSD1Q15040 202 aaPredicted RBP9.04□□□□□ -0.96
HIF3A-205ENST00000377670 RNF166Q96A37 237 aaPredicted RBP9.04□□□□□ -0.96
HIF3A-205ENST00000377670 TMEM160Q9NX00 188 aa9.04□□□□□ -0.96
HIF3A-205ENST00000377670 IL36BQ9NZH7 164 aa9.04□□□□□ -0.96
HIF3A-205ENST00000377670 S4R3C0 116 aa9.04□□□□□ -0.96
HIF3A-205ENST00000377670 A0A087WWC5 75 aa9.04□□□□□ -0.96
HIF3A-205ENST00000377670 TRAV8-6A0A0B4J262 113 aa9.04□□□□□ -0.96
HIF3A-205ENST00000377670 A0A1B0GWB2 263 aa9.04□□□□□ -0.96
HIF3A-205ENST00000377670 C9JCJ5 164 aa9.04□□□□□ -0.96
HIF3A-205ENST00000377670 RRHO14718 337 aa9.04□□□□□ -0.96
HIF3A-205ENST00000377670 BTCP35070 178 aa9.04□□□□□ -0.96
HIF3A-205ENST00000377670 PEAR1Q5VY43 1037 aaPredicted RBP9.04□□□□□ -0.96
HIF3A-205ENST00000377670 BRD3OSQ6XYD6 125 aa9.04□□□□□ -0.96
HIF3A-205ENST00000377670 PSMG3Q9BT73 122 aaPredicted RBP9.04□□□□□ -0.96
HIF3A-205ENST00000377670 MRPL16Q9NX20 251 aaKnown RBP9.04□□□□□ -0.96
HIF3A-205ENST00000377670 SPCS1Q9Y6A9 102 aa9.04□□□□□ -0.96
HIF3A-205ENST00000377670 FRMPD3Q5JV73 1810 aa9.03□□□□□ -0.96
HIF3A-205ENST00000377670 CA1P00915 261 aaPredicted RBP9.03□□□□□ -0.96
HIF3A-205ENST00000377670 ANOS1P23352 680 aa9.03□□□□□ -0.96
HIF3A-205ENST00000377670 FAM90A1Q86YD7 464 aa9.03□□□□□ -0.96
HIF3A-205ENST00000377670 ZNF525Q8N782 197 aa9.03□□□□□ -0.96
HIF3A-205ENST00000377670 CLDN16Q9Y5I7 305 aa9.03□□□□□ -0.96
HIF3A-205ENST00000377670 NBR2O15453 112 aa9.03□□□□□ -0.96
HIF3A-205ENST00000377670 ERVK11-1P61568 191 aa9.03□□□□□ -0.96
HIF3A-205ENST00000377670 GCSAMLQ5JQS6 135 aa9.03□□□□□ -0.96
HIF3A-205ENST00000377670 VMO1Q7Z5L0 202 aa9.03□□□□□ -0.96
HIF3A-205ENST00000377670 PLSCR4Q9NRQ2 329 aa9.03□□□□□ -0.96
HIF3A-205ENST00000377670 C21orf62Q9NYP8 219 aa9.03□□□□□ -0.96
HIF3A-205ENST00000377670 H3BUX3 64 aa9.03□□□□□ -0.96
HIF3A-205ENST00000377670 UBE2CO00762 179 aa9.03□□□□□ -0.96
HIF3A-205ENST00000377670 CRPP02741 224 aa9.03□□□□□ -0.96
HIF3A-205ENST00000377670 CR1LQ2VPA4 569 aa9.03□□□□□ -0.96
HIF3A-205ENST00000377670 PLA2G2CQ5R387 149 aa9.03□□□□□ -0.96
HIF3A-205ENST00000377670 KLHL30-AS1Q8NEE0 82 aa9.03□□□□□ -0.96
HIF3A-205ENST00000377670 CLDND2Q8NHS1 167 aa9.03□□□□□ -0.96
HIF3A-205ENST00000377670 ZNF414Q96IQ9 312 aa9.03□□□□□ -0.96
HIF3A-205ENST00000377670 IQCF6A8MYZ5 107 aa9.03□□□□□ -0.96
HIF3A-205ENST00000377670 GATA3P23771 443 aa9.03□□□□□ -0.96
HIF3A-205ENST00000377670 TMEM167AQ8TBQ9 72 aa9.03□□□□□ -0.96
HIF3A-205ENST00000377670 C18orf15Q96N68 181 aa9.03□□□□□ -0.96
HIF3A-205ENST00000377670 LAMTOR2Q9Y2Q5 125 aa9.03□□□□□ -0.96
HIF3A-205ENST00000377670 TANC1Q9C0D5 1861 aa9.03□□□□□ -0.96
HIF3A-205ENST00000377670 BRCA2P51587 3418 aa9.03□□□□□ -0.96
HIF3A-205ENST00000377670 RIPPLY3P57055 190 aa9.03□□□□□ -0.96
HIF3A-205ENST00000377670 NABP2Q9BQ15 211 aa9.03□□□□□ -0.96
HIF3A-205ENST00000377670 BPESC1Q9GZL8 116 aa9.03□□□□□ -0.96
HIF3A-205ENST00000377670 ZMAT4Q9H898 229 aa9.03□□□□□ -0.96
HIF3A-205ENST00000377670 SCO2A0A1W2PP80 73 aa9.02□□□□□ -0.96
HIF3A-205ENST00000377670 ASPHD2Q6ICH7 369 aa9.02□□□□□ -0.96
HIF3A-205ENST00000377670 C10orf126Q8N4M7 172 aa9.02□□□□□ -0.96
HIF3A-205ENST00000377670 KBTBD11-OT1A0A1B0GTJ5 212 aa9.02□□□□□ -0.97
HIF3A-205ENST00000377670 SDF2L1Q9HCN8 221 aa9.02□□□□□ -0.97
HIF3A-205ENST00000377670 EREGO14944 169 aa9.02□□□□□ -0.97
HIF3A-205ENST00000377670 TCF24Q7RTU0 167 aa9.02□□□□□ -0.97
HIF3A-205ENST00000377670 RSPO3Q9BXY4 272 aaPredicted RBP9.02□□□□□ -0.97
HIF3A-205ENST00000377670 NPCDR1Q9BY65 106 aa9.02□□□□□ -0.97
HIF3A-205ENST00000377670 SHANK1Q9Y566 2161 aa9.02□□□□□ -0.97
HIF3A-205ENST00000377670 GBF1Q92538 1859 aa9.02□□□□□ -0.97
HIF3A-205ENST00000377670 UCP3P55916 312 aa9.02□□□□□ -0.97
HIF3A-205ENST00000377670 TFF3Q07654 80 aa9.02□□□□□ -0.97
HIF3A-205ENST00000377670 TCF23Q7RTU1 214 aa9.02□□□□□ -0.97
HIF3A-205ENST00000377670 RTBDNQ9BSG5 229 aaPredicted RBP9.02□□□□□ -0.97
HIF3A-205ENST00000377670 TMEM133Q9H2Q1 129 aa9.02□□□□□ -0.97
HIF3A-205ENST00000377670 PLSCR2Q9NRY7 297 aa9.02□□□□□ -0.97
HIF3A-205ENST00000377670 MSMBP08118 114 aa9.02□□□□□ -0.97
HIF3A-205ENST00000377670 CCL3L1P16619 93 aa9.02□□□□□ -0.97
HIF3A-205ENST00000377670 GATA4P43694 442 aa9.02□□□□□ -0.97
HIF3A-205ENST00000377670 CYP2G1PQ6ZSU1 146 aa9.02□□□□□ -0.97
HIF3A-205ENST00000377670 FAM169BQ8N8A8 192 aa9.02□□□□□ -0.97
HIF3A-205ENST00000377670 REPIN1Q9BWE0 567 aaKnown RBP9.02□□□□□ -0.97
HIF3A-205ENST00000377670 SERF1AO75920 110 aa9.01□□□□□ -0.97
HIF3A-205ENST00000377670 IGHV3-48P01763 117 aa9.01□□□□□ -0.97
HIF3A-205ENST00000377670 ATP5G3P48201 142 aa9.01□□□□□ -0.97
HIF3A-205ENST00000377670 CD24P25063 80 aa9.01□□□□□ -0.97
HIF3A-205ENST00000377670 ZNF415Q09FC8 603 aa9.01□□□□□ -0.97
HIF3A-205ENST00000377670 GOLT1AQ6ZVE7 132 aa9.01□□□□□ -0.97
HIF3A-205ENST00000377670 MCRIP2Q9BUT9 160 aaKnown RBP9.01□□□□□ -0.97
HIF3A-205ENST00000377670 H3BUT2 72 aa9.01□□□□□ -0.97
HIF3A-205ENST00000377670 TYMSP04818 313 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms