RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 OR10G7Q8NGN6 311 aa12.79□□□□□ -0.36
FXN-201ENST00000377270 SPRR3Q9UBC9 169 aa12.79□□□□□ -0.36
FXN-201ENST00000377270 A0A087WX48 190 aa12.79□□□□□ -0.36
FXN-201ENST00000377270 PRTN3P24158 256 aa12.79□□□□□ -0.36
FXN-201ENST00000377270 TNXAQ16473 311 aa12.79□□□□□ -0.36
FXN-201ENST00000377270 SH2D6Q7Z4S9 175 aa12.79□□□□□ -0.36
FXN-201ENST00000377270 FRYQ5TBA9 3013 aa12.79□□□□□ -0.36
FXN-201ENST00000377270 PIGBOS1A0A0B4J2F0 54 aa12.78□□□□□ -0.36
FXN-201ENST00000377270 HSBP1O75506 76 aa12.78□□□□□ -0.36
FXN-201ENST00000377270 Q6ZS49 121 aa12.78□□□□□ -0.36
FXN-201ENST00000377270 TTC9CQ8N5M4 171 aa12.78□□□□□ -0.36
FXN-201ENST00000377270 GLMPQ8WWB7 406 aa12.78□□□□□ -0.36
FXN-201ENST00000377270 ZNF488Q96MN9 340 aa12.78□□□□□ -0.36
FXN-201ENST00000377270 HES4Q9HCC6 221 aa12.78□□□□□ -0.36
FXN-201ENST00000377270 TUSC2O75896 110 aa12.78□□□□□ -0.36
FXN-201ENST00000377270 SCTP09683 121 aa12.78□□□□□ -0.36
FXN-201ENST00000377270 INSL3P51460 131 aa12.78□□□□□ -0.36
FXN-201ENST00000377270 GNB1P62873 340 aa12.78□□□□□ -0.36
FXN-201ENST00000377270 SLC38A11Q08AI6 406 aa12.78□□□□□ -0.36
FXN-201ENST00000377270 TIGITQ495A1 244 aa12.78□□□□□ -0.36
FXN-201ENST00000377270 BPIFA4PQ86YQ2 179 aa12.78□□□□□ -0.36
FXN-201ENST00000377270 TMEM70Q9BUB7 260 aa12.78□□□□□ -0.36
FXN-201ENST00000377270 CACNG5Q9UF02 275 aa12.78□□□□□ -0.36
FXN-201ENST00000377270 SPINK4O60575 86 aa12.77□□□□□ -0.36
FXN-201ENST00000377270 CATR1Q13166 79 aa12.77□□□□□ -0.36
FXN-201ENST00000377270 SPANXN5Q5MJ07 72 aa12.77□□□□□ -0.36
FXN-201ENST00000377270 SPATA46Q5T0L3 261 aa12.77□□□□□ -0.36
FXN-201ENST00000377270 MDP1Q86V88 176 aa12.77□□□□□ -0.36
FXN-201ENST00000377270 C20orf78Q9BR46 151 aa12.77□□□□□ -0.36
FXN-201ENST00000377270 CSDC2Q9Y534 153 aaKnown RBP12.77□□□□□ -0.36
FXN-201ENST00000377270 C3orf80F5H4A9 247 aa12.77□□□□□ -0.37
FXN-201ENST00000377270 BMPR1BO00238 502 aa12.77□□□□□ -0.37
FXN-201ENST00000377270 NAPSAO96009 420 aa12.77□□□□□ -0.37
FXN-201ENST00000377270 CRYAAP02489 173 aa12.77□□□□□ -0.37
FXN-201ENST00000377270 ANXA2RQ3ZCQ2 193 aa12.77□□□□□ -0.37
FXN-201ENST00000377270 TMEM178AQ8NBL3 297 aa12.77□□□□□ -0.37
FXN-201ENST00000377270 LSM10Q969L4 123 aaKnown RBP12.77□□□□□ -0.37
FXN-201ENST00000377270 PTH2Q96A98 100 aa12.77□□□□□ -0.37
FXN-201ENST00000377270 NDUFB4O95168 129 aa12.76□□□□□ -0.37
FXN-201ENST00000377270 ETDBQ3ZM63 59 aa12.76□□□□□ -0.37
FXN-201ENST00000377270 TM2D2Q9BX73 214 aa12.76□□□□□ -0.37
FXN-201ENST00000377270 CA6P23280 308 aa12.76□□□□□ -0.37
FXN-201ENST00000377270 VDAC2P45880 294 aaPredicted RBP12.76□□□□□ -0.37
FXN-201ENST00000377270 NANOS1Q8WY41 292 aaKnown RBP12.76□□□□□ -0.37
FXN-201ENST00000377270 OR2D2Q9H210 308 aa12.76□□□□□ -0.37
FXN-201ENST00000377270 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.76□□□□□ -0.37
FXN-201ENST00000377270 MPC1Q9Y5U8 109 aa12.76□□□□□ -0.37
FXN-201ENST00000377270 LINC00312Q9Y6C7 94 aa12.76□□□□□ -0.37
FXN-201ENST00000377270 CACNA1HO95180 2353 aa12.76□□□□□ -0.37
FXN-201ENST00000377270 TTC28Q96AY4 2481 aa12.76□□□□□ -0.37
FXN-201ENST00000377270 OR51H1Q8NH63 302 aa12.75□□□□□ -0.37
FXN-201ENST00000377270 GGTLC1Q9BX51 225 aa12.75□□□□□ -0.37
FXN-201ENST00000377270 CDIP1Q9H305 208 aa12.75□□□□□ -0.37
FXN-201ENST00000377270 FAM90A27PA6NNH2 459 aa12.75□□□□□ -0.37
FXN-201ENST00000377270 DEGS1O15121 323 aa12.75□□□□□ -0.37
FXN-201ENST00000377270 MT-ND6P03923 174 aa12.75□□□□□ -0.37
FXN-201ENST00000377270 COX5AP20674 150 aa12.75□□□□□ -0.37
FXN-201ENST00000377270 SAMD5Q5TGI4 173 aa12.75□□□□□ -0.37
FXN-201ENST00000377270 TMEM136Q6ZRR5 245 aa12.75□□□□□ -0.37
FXN-201ENST00000377270 ARPC1AQ92747 370 aa12.75□□□□□ -0.37
FXN-201ENST00000377270 OR2T6Q8NHC8 308 aa12.75□□□□□ -0.37
FXN-201ENST00000377270 RDH5Q92781 318 aa12.75□□□□□ -0.37
FXN-201ENST00000377270 NHLRC4P0CG21 123 aaPredicted RBP12.74□□□□□ -0.37
FXN-201ENST00000377270 REG1BP48304 166 aa12.74□□□□□ -0.37
FXN-201ENST00000377270 CCL11P51671 97 aa12.74□□□□□ -0.37
FXN-201ENST00000377270 MOB1BQ7L9L4 216 aa12.74□□□□□ -0.37
FXN-201ENST00000377270 ZBTB34Q8NCN2 500 aa12.74□□□□□ -0.37
FXN-201ENST00000377270 OSR1Q8TAX0 266 aaPredicted RBP12.74□□□□□ -0.37
FXN-201ENST00000377270 TRBV20OR9-2A0A075B6H5 130 aa12.74□□□□□ -0.37
FXN-201ENST00000377270 KIR2DS1A0A191URI9 304 aa12.74□□□□□ -0.37
FXN-201ENST00000377270 CCDC179H3BU77 68 aa12.74□□□□□ -0.37
FXN-201ENST00000377270 FCGR2BP31994 310 aaPredicted RBP12.74□□□□□ -0.37
FXN-201ENST00000377270 KIR2DS4P43632 304 aa12.74□□□□□ -0.37
FXN-201ENST00000377270 KIR2DS1Q14954 304 aa12.74□□□□□ -0.37
FXN-201ENST00000377270 VGLL1Q99990 258 aa12.74□□□□□ -0.37
FXN-201ENST00000377270 KCNIP2Q9NS61 270 aa12.74□□□□□ -0.37
FXN-201ENST00000377270 ATP23Q9Y6H3 246 aa12.74□□□□□ -0.37
FXN-201ENST00000377270 IGKV1-6A0A0C4DH72 117 aa12.73□□□□□ -0.37
FXN-201ENST00000377270 FABP5P3A8MUU1 101 aa12.73□□□□□ -0.37
FXN-201ENST00000377270 ATP5G3P48201 142 aa12.73□□□□□ -0.37
FXN-201ENST00000377270 XGP55808 180 aa12.73□□□□□ -0.37
FXN-201ENST00000377270 TBC1D28Q2M2D7 210 aa12.73□□□□□ -0.37
FXN-201ENST00000377270 RPEL1Q2QD12 228 aa12.73□□□□□ -0.37
FXN-201ENST00000377270 C20orf204Q6ZNR8 217 aa12.73□□□□□ -0.37
FXN-201ENST00000377270 Q6ZUT4 128 aa12.73□□□□□ -0.37
FXN-201ENST00000377270 MMD2Q8IY49 270 aa12.73□□□□□ -0.37
FXN-201ENST00000377270 EP300Q09472 2414 aaPredicted RBP12.73□□□□□ -0.37
FXN-201ENST00000377270 MED12LQ86YW9 2145 aa12.73□□□□□ -0.37
FXN-201ENST00000377270 IGKV1-39P01597 117 aa12.73□□□□□ -0.37
FXN-201ENST00000377270 IGKV1D-39P04432 117 aa12.73□□□□□ -0.37
FXN-201ENST00000377270 TMEM14EPQ6UXP3 125 aa12.73□□□□□ -0.37
FXN-201ENST00000377270 SYT8Q8NBV8 401 aa12.73□□□□□ -0.37
FXN-201ENST00000377270 LOC400499M0QZD8 3231 aa12.72□□□□□ -0.37
FXN-201ENST00000377270 TRAV24A0A0B4J272 114 aa12.72□□□□□ -0.37
FXN-201ENST00000377270 GAGE12JA6NER3 117 aa12.72□□□□□ -0.37
FXN-201ENST00000377270 WIPF1O43516 503 aa12.72□□□□□ -0.37
FXN-201ENST00000377270 GAGE7O76087 117 aa12.72□□□□□ -0.37
FXN-201ENST00000377270 GAGE12FP0CL80 117 aa12.72□□□□□ -0.37
FXN-201ENST00000377270 GAGE12GP0CL81 117 aa12.72□□□□□ -0.37
FXN-201ENST00000377270 GAGE12IP0CL82 117 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms