RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 A0A1B0GU03 582 aa16.67■□□□□ 0.26
SRM-201ENST00000376957 UBE2MP61081 183 aaKnown RBP16.67■□□□□ 0.26
SRM-201ENST00000376957 SUPT4H1P63272 117 aaKnown RBP16.67■□□□□ 0.26
SRM-201ENST00000376957 SLC24A4Q8NFF2 622 aa16.67■□□□□ 0.26
SRM-201ENST00000376957 OR1S1Q8NH92 325 aa16.67■□□□□ 0.26
SRM-201ENST00000376957 C7orf50Q9BRJ6 194 aaKnown RBP16.67■□□□□ 0.26
SRM-201ENST00000376957 SCAF4O95104 1147 aaKnown RBP16.66■□□□□ 0.26
SRM-201ENST00000376957 IGHV3-48P01763 117 aa16.66■□□□□ 0.26
SRM-201ENST00000376957 EDN2P20800 178 aa16.66■□□□□ 0.26
SRM-201ENST00000376957 PVRIGQ6DKI7 326 aa16.66■□□□□ 0.26
SRM-201ENST00000376957 LYZL2Q7Z4W2 148 aa16.66■□□□□ 0.26
SRM-201ENST00000376957 RNASEH2CQ8TDP1 164 aaKnown RBP16.66■□□□□ 0.26
SRM-201ENST00000376957 SPAG8Q99932 426 aaPredicted RBP16.66■□□□□ 0.26
SRM-201ENST00000376957 U3KQ87 197 aa16.66■□□□□ 0.26
SRM-201ENST00000376957 TRAV14DV4A0A0A6YYC5 116 aa16.65■□□□□ 0.26
SRM-201ENST00000376957 OR11H12B2RN74 326 aa16.65■□□□□ 0.26
SRM-201ENST00000376957 CD5P06127 495 aa16.65■□□□□ 0.26
SRM-201ENST00000376957 SLC25A4P12235 298 aa16.65■□□□□ 0.26
SRM-201ENST00000376957 ATP5IP56385 69 aaPredicted RBP16.65■□□□□ 0.26
SRM-201ENST00000376957 BAK1Q16611 211 aa16.65■□□□□ 0.26
SRM-201ENST00000376957 CNPY1Q3B7I2 92 aa16.65■□□□□ 0.26
SRM-201ENST00000376957 BSXQ3C1V8 233 aa16.65■□□□□ 0.26
SRM-201ENST00000376957 C2orf83Q53S99 150 aa16.65■□□□□ 0.26
SRM-201ENST00000376957 NMSQ5H8A3 153 aa16.65■□□□□ 0.26
SRM-201ENST00000376957 ZNF600Q6ZNG1 722 aa16.65■□□□□ 0.26
SRM-201ENST00000376957 PRR13Q9NZ81 148 aa16.65■□□□□ 0.26
SRM-201ENST00000376957 TMED3Q9Y3Q3 217 aa16.65■□□□□ 0.26
SRM-201ENST00000376957 SFT2D2O95562 160 aa16.64■□□□□ 0.25
SRM-201ENST00000376957 IFNA10P01566 189 aa16.64■□□□□ 0.25
SRM-201ENST00000376957 TNFRSF9Q07011 255 aa16.64■□□□□ 0.25
SRM-201ENST00000376957 LRTM2Q8N967 370 aa16.64■□□□□ 0.25
SRM-201ENST00000376957 TMEM116Q8NCL8 245 aa16.64■□□□□ 0.25
SRM-201ENST00000376957 OR4X1Q8NH49 305 aa16.64■□□□□ 0.25
SRM-201ENST00000376957 OR10C1Q96KK4 312 aa16.64■□□□□ 0.25
SRM-201ENST00000376957 HSPB7Q9UBY9 170 aa16.64■□□□□ 0.25
SRM-201ENST00000376957 CLN5O75503 358 aa16.63■□□□□ 0.25
SRM-201ENST00000376957 NXPH3O95157 252 aa16.63■□□□□ 0.25
SRM-201ENST00000376957 TMEM50AO95807 157 aa16.63■□□□□ 0.25
SRM-201ENST00000376957 CD7P09564 240 aa16.63■□□□□ 0.25
SRM-201ENST00000376957 NPY1RP25929 384 aa16.63■□□□□ 0.25
SRM-201ENST00000376957 DTD1Q8TEA8 209 aa16.63■□□□□ 0.25
SRM-201ENST00000376957 RCHY1Q96PM5 261 aa16.63■□□□□ 0.25
SRM-201ENST00000376957 SMPXQ9UHP9 88 aa16.63■□□□□ 0.25
SRM-201ENST00000376957 IGHV3OR16-8A0A075B7F1 116 aa16.62■□□□□ 0.25
SRM-201ENST00000376957 LINC00854A0A1B0GVQ3 168 aa16.62■□□□□ 0.25
SRM-201ENST00000376957 OR4C46A6NHA9 309 aa16.62■□□□□ 0.25
SRM-201ENST00000376957 TSPAN4O14817 238 aa16.62■□□□□ 0.25
SRM-201ENST00000376957 MED6O75586 246 aa16.62■□□□□ 0.25
SRM-201ENST00000376957 NDUFB6O95139 128 aa16.62■□□□□ 0.25
SRM-201ENST00000376957 SLC25A6P12236 298 aa16.62■□□□□ 0.25
SRM-201ENST00000376957 NARS2Q96I59 477 aaKnown RBP16.62■□□□□ 0.25
SRM-201ENST00000376957 SPATA25Q9BR10 227 aa16.62■□□□□ 0.25
SRM-201ENST00000376957 IGHV7-4-1A0A0J9YVY3 117 aa16.61■□□□□ 0.25
SRM-201ENST00000376957 ZNF207O43670 478 aaKnown RBP16.61■□□□□ 0.25
SRM-201ENST00000376957 IL7P13232 177 aa16.61■□□□□ 0.25
SRM-201ENST00000376957 CMC4P56277 68 aaPredicted RBP16.61■□□□□ 0.25
SRM-201ENST00000376957 PAFAH1B2P68402 229 aa16.61■□□□□ 0.25
SRM-201ENST00000376957 RPP30P78346 268 aaKnown RBP16.61■□□□□ 0.25
SRM-201ENST00000376957 PPP1R1AQ13522 171 aa16.61■□□□□ 0.25
SRM-201ENST00000376957 LINC00299Q6ZSB3 139 aa16.61■□□□□ 0.25
SRM-201ENST00000376957 COQ8AQ8NI60 647 aa16.61■□□□□ 0.25
SRM-201ENST00000376957 RHPN1-AS1Q9BWJ2 59 aa16.61■□□□□ 0.25
SRM-201ENST00000376957 TMEM231Q9H6L2 316 aa16.61■□□□□ 0.25
SRM-201ENST00000376957 SRD5A3Q9H8P0 318 aa16.61■□□□□ 0.25
SRM-201ENST00000376957 FAM90A26D6RGX4 464 aa16.6■□□□□ 0.25
SRM-201ENST00000376957 DEFB125Q8N687 156 aa16.6■□□□□ 0.25
SRM-201ENST00000376957 TM2D3Q9BRN9 247 aa16.6■□□□□ 0.25
SRM-201ENST00000376957 RBKSQ9H477 322 aa16.6■□□□□ 0.25
SRM-201ENST00000376957 PUS1Q9Y606 427 aaKnown RBP eCLIP16.6■□□□□ 0.25
SRM-201ENST00000376957 SELENOKQ9Y6D0 94 aa16.6■□□□□ 0.25
SRM-201ENST00000376957 COL7A1Q02388 2944 aa16.59■□□□□ 0.25
SRM-201ENST00000376957 A0A1W2PS18 150 aa16.59■□□□□ 0.25
SRM-201ENST00000376957 IFNA4P05014 189 aa16.59■□□□□ 0.25
SRM-201ENST00000376957 NPPCP23582 126 aa16.59■□□□□ 0.25
SRM-201ENST00000376957 TOMM20LQ6UXN7 152 aa16.59■□□□□ 0.25
SRM-201ENST00000376957 CIB3Q96Q77 187 aaPredicted RBP16.59■□□□□ 0.25
SRM-201ENST00000376957 FNDC4Q9H6D8 234 aaPredicted RBP16.59■□□□□ 0.25
SRM-201ENST00000376957 CHEK1O14757 476 aa16.58■□□□□ 0.24
SRM-201ENST00000376957 IFNA21P01568 189 aa16.58■□□□□ 0.24
SRM-201ENST00000376957 RAB11AP62491 216 aa16.58■□□□□ 0.24
SRM-201ENST00000376957 HAGHQ16775 308 aa16.58■□□□□ 0.24
SRM-201ENST00000376957 C4orf46Q504U0 113 aa16.58■□□□□ 0.24
SRM-201ENST00000376957 OR1S2Q8NGQ3 325 aa16.58■□□□□ 0.24
SRM-201ENST00000376957 Q8WTZ3 238 aa16.58■□□□□ 0.24
SRM-201ENST00000376957 METTL26Q96S19 204 aa16.58■□□□□ 0.24
SRM-201ENST00000376957 S100ZQ8WXG8 99 aa16.57■□□□□ 0.24
SRM-201ENST00000376957 SDHCQ99643 169 aaPredicted RBP16.57■□□□□ 0.24
SRM-201ENST00000376957 C9orf170A2RU37 121 aa16.56■□□□□ 0.24
SRM-201ENST00000376957 HOXB5P09067 269 aa16.56■□□□□ 0.24
SRM-201ENST00000376957 OR10J1P30954 320 aa16.56■□□□□ 0.24
SRM-201ENST00000376957 RND2P52198 227 aa16.56■□□□□ 0.24
SRM-201ENST00000376957 MLANAQ16655 118 aa16.56■□□□□ 0.24
SRM-201ENST00000376957 PRSS54Q6PEW0 395 aa16.56■□□□□ 0.24
SRM-201ENST00000376957 GRAMD2BQ96HH9 432 aa16.56■□□□□ 0.24
SRM-201ENST00000376957 RNF2Q99496 336 aa16.56■□□□□ 0.24
SRM-201ENST00000376957 CCDC32Q9BV29 185 aa16.56■□□□□ 0.24
SRM-201ENST00000376957 PITX3O75364 302 aa16.55■□□□□ 0.24
SRM-201ENST00000376957 OR4E1P0C645 316 aa16.55■□□□□ 0.24
SRM-201ENST00000376957 EIF2B2P49770 351 aaKnown RBP16.55■□□□□ 0.24
SRM-201ENST00000376957 YPEL3P61236 119 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms