RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 TPTE2P1Q5T6R2 138 aa9.84□□□□□ -0.83
VPS13A-205ENST00000376636 NCOR1P1Q9H4R4 102 aa9.84□□□□□ -0.83
VPS13A-205ENST00000376636 IGKV1D-33P01593 117 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 IGKV1-33P01594 117 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 SRP19P09132 144 aaKnown RBP9.83□□□□□ -0.84
VPS13A-205ENST00000376636 ZIC4Q8N9L1 334 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 GTF3AQ92664 365 aaKnown RBP9.83□□□□□ -0.84
VPS13A-205ENST00000376636 FAM90A2PQ658T7 463 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 PPP1R27Q86WC6 154 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 OSTCQ9NRP0 149 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 HRKO00198 91 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 TEX43Q6ZNM6 134 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 SLC25A48Q6ZT89 311 aaKnown RBP9.83□□□□□ -0.84
VPS13A-205ENST00000376636 HIST1H2BKO60814 126 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 HIST1H2BJP06899 126 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 HIST1H2BOP23527 126 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 HIST1H2BBP33778 126 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 HIST1H2BDP58876 126 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 HIST1H2BCP62807 126 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 HIST2H2BEQ16778 126 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.83□□□□□ -0.84
VPS13A-205ENST00000376636 OR5P3Q8WZ94 311 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 HIST1H2BHQ93079 126 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 HIST1H2BNQ99877 126 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 HIST1H2BMQ99879 126 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 LILRA1O75019 489 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 ZNF708P17019 499 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 LIMS1P48059 325 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 A0A087WX48 190 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 GAGE12BA1L429 117 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 IGHMP01871 453 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 TMEM242Q9NWH2 141 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 TRPM3Q9HCF6 1732 aaPredicted RBP9.83□□□□□ -0.84
VPS13A-205ENST00000376636 TMEM8BA6NDV4 472 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 MUC21A0A0G2JKD1 596 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 MUC21A0A140T8X8 626 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 LINC01565O15544 149 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 MLNRO43193 412 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 SP9P0CG40 484 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 MUC21Q5SSG8 566 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 ROS1P08922 2347 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 NPIPB13A6NJU9 1138 aa9.83□□□□□ -0.84
VPS13A-205ENST00000376636 TRACP01848 142 aa9.82□□□□□ -0.84
VPS13A-205ENST00000376636 ZPLD1Q8TCW7 415 aa9.82□□□□□ -0.84
VPS13A-205ENST00000376636 LEAP2Q969E1 77 aa9.82□□□□□ -0.84
VPS13A-205ENST00000376636 DPM3Q9P2X0 92 aa9.82□□□□□ -0.84
VPS13A-205ENST00000376636 IGHV3-64A0A075B6Q5 118 aa9.82□□□□□ -0.84
VPS13A-205ENST00000376636 IGHV1-45A0A0A0MS14 117 aa9.82□□□□□ -0.84
VPS13A-205ENST00000376636 TFF3Q07654 80 aa9.82□□□□□ -0.84
VPS13A-205ENST00000376636 UBE2DNLQ8IWF7 75 aa9.82□□□□□ -0.84
VPS13A-205ENST00000376636 LHFPL6Q9Y693 200 aa9.82□□□□□ -0.84
VPS13A-205ENST00000376636 PAPPAQ13219 1627 aa9.82□□□□□ -0.84
VPS13A-205ENST00000376636 TRBV5-7A0A0A0MS05 114 aa9.82□□□□□ -0.84
VPS13A-205ENST00000376636 GZMBP10144 247 aa9.82□□□□□ -0.84
VPS13A-205ENST00000376636 SPRED2Q7Z698 418 aa9.82□□□□□ -0.84
VPS13A-205ENST00000376636 ZNF703Q9H7S9 590 aaPredicted RBP9.82□□□□□ -0.84
VPS13A-205ENST00000376636 FAM90A1Q86YD7 464 aa9.82□□□□□ -0.84
VPS13A-205ENST00000376636 IGHV3OR16-13A0A075B7E8 117 aa9.82□□□□□ -0.84
VPS13A-205ENST00000376636 IGHV3-74A0A0B4J1X5 117 aa9.82□□□□□ -0.84
VPS13A-205ENST00000376636 C1QTNF9P0C862 333 aa9.82□□□□□ -0.84
VPS13A-205ENST00000376636 PLCE1Q9P212 2302 aa9.82□□□□□ -0.84
VPS13A-205ENST00000376636 CD5P06127 495 aa9.81□□□□□ -0.84
VPS13A-205ENST00000376636 DRD3P35462 400 aa9.81□□□□□ -0.84
VPS13A-205ENST00000376636 RFLNBQ8N5W9 214 aa9.81□□□□□ -0.84
VPS13A-205ENST00000376636 UBE2WQ96B02 151 aa9.81□□□□□ -0.84
VPS13A-205ENST00000376636 PMVKQ15126 192 aa9.81□□□□□ -0.84
VPS13A-205ENST00000376636 KLF17Q5JT82 389 aaPredicted RBP9.81□□□□□ -0.84
VPS13A-205ENST00000376636 C8orf82Q6P1X6 216 aaPredicted RBP9.81□□□□□ -0.84
VPS13A-205ENST00000376636 SLC25A47Q6Q0C1 308 aa9.81□□□□□ -0.84
VPS13A-205ENST00000376636 CLEC19AQ6UXS0 136 aa9.81□□□□□ -0.84
VPS13A-205ENST00000376636 CFHR5Q9BXR6 569 aa9.81□□□□□ -0.84
VPS13A-205ENST00000376636 PSCAO43653 123 aa9.81□□□□□ -0.84
VPS13A-205ENST00000376636 RPL39P5Q59GN2 51 aa9.81□□□□□ -0.84
VPS13A-205ENST00000376636 GPHA2Q96T91 129 aa9.81□□□□□ -0.84
VPS13A-205ENST00000376636 TNFSF13O75888 250 aa9.81□□□□□ -0.84
VPS13A-205ENST00000376636 ASPHD2Q6ICH7 369 aa9.81□□□□□ -0.84
VPS13A-205ENST00000376636 TRBV5-3A0A0A0MS03 114 aa9.81□□□□□ -0.84
VPS13A-205ENST00000376636 PROB1E7EW31 1015 aa9.81□□□□□ -0.84
VPS13A-205ENST00000376636 CISD3P0C7P0 127 aa9.81□□□□□ -0.84
VPS13A-205ENST00000376636 YBX2Q9Y2T7 364 aaKnown RBP9.81□□□□□ -0.84
VPS13A-205ENST00000376636 IGHV3-35A0A0C4DH35 117 aa9.81□□□□□ -0.84
VPS13A-205ENST00000376636 SOCS3O14543 225 aa9.81□□□□□ -0.84
VPS13A-205ENST00000376636 CELA2BP08218 269 aaPredicted RBP9.81□□□□□ -0.84
VPS13A-205ENST00000376636 BCL6BQ8N143 479 aaPredicted RBP9.81□□□□□ -0.84
VPS13A-205ENST00000376636 SBF1O95248 1867 aa9.81□□□□□ -0.84
VPS13A-205ENST00000376636 EVI2AP22794 236 aa9.81□□□□□ -0.84
VPS13A-205ENST00000376636 PLXND1Q9Y4D7 1925 aa9.81□□□□□ -0.84
VPS13A-205ENST00000376636 UPK2O00526 184 aa9.81□□□□□ -0.84
VPS13A-205ENST00000376636 RASL10AQ92737 203 aa9.81□□□□□ -0.84
VPS13A-205ENST00000376636 IGHV3-49A0A0A0MS15 119 aa9.8□□□□□ -0.84
VPS13A-205ENST00000376636 SELLP14151 372 aa9.8□□□□□ -0.84
VPS13A-205ENST00000376636 TSKUQ8WUA8 353 aa9.8□□□□□ -0.84
VPS13A-205ENST00000376636 VDAC2P45880 294 aaPredicted RBP9.8□□□□□ -0.84
VPS13A-205ENST00000376636 RPL23P62829 140 aaKnown RBP9.8□□□□□ -0.84
VPS13A-205ENST00000376636 CD200R1LQ6Q8B3 271 aa9.8□□□□□ -0.84
VPS13A-205ENST00000376636 ACP7Q6ZNF0 438 aa9.8□□□□□ -0.84
VPS13A-205ENST00000376636 A0A1W2PRE2 83 aa9.8□□□□□ -0.84
VPS13A-205ENST00000376636 CMC4P56277 68 aaPredicted RBP9.8□□□□□ -0.84
VPS13A-205ENST00000376636 SNHG12Q9BXW3 62 aa9.8□□□□□ -0.84
VPS13A-205ENST00000376636 UBL5Q9BZL1 73 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms