RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 CYSLTR1Q9Y271 337 aa8.29□□□□□ -1.08
SPEN-201ENST00000375759 COX6B1P14854 86 aa8.28□□□□□ -1.08
SPEN-201ENST00000375759 TOMM7Q9P0U1 55 aa8.28□□□□□ -1.08
SPEN-201ENST00000375759 C1QL2Q7Z5L3 287 aa8.28□□□□□ -1.08
SPEN-201ENST00000375759 OR9G4Q8NGQ1 327 aa8.28□□□□□ -1.08
SPEN-201ENST00000375759 LOC101059948A0A1B0GTJ6 334 aa8.28□□□□□ -1.08
SPEN-201ENST00000375759 TRAV12-3A0A0B4J271 114 aa8.28□□□□□ -1.08
SPEN-201ENST00000375759 A0A0G2JMZ2 1700 aa8.28□□□□□ -1.08
SPEN-201ENST00000375759 LRRC37A2A6NM11 1700 aa8.28□□□□□ -1.08
SPEN-201ENST00000375759 LRRC37AA6NMS7 1700 aa8.28□□□□□ -1.08
SPEN-201ENST00000375759 NCKAP5O14513 1909 aa8.28□□□□□ -1.08
SPEN-201ENST00000375759 C17orf98A8MV24 154 aa8.28□□□□□ -1.08
SPEN-201ENST00000375759 MALP21145 153 aa8.28□□□□□ -1.08
SPEN-201ENST00000375759 TMPRSS3P57727 454 aa8.28□□□□□ -1.08
SPEN-201ENST00000375759 RNF126Q9BV68 326 aa8.28□□□□□ -1.08
SPEN-201ENST00000375759 TSC2P49815 1807 aa8.28□□□□□ -1.08
SPEN-201ENST00000375759 IGKCP01834 107 aa8.28□□□□□ -1.08
SPEN-201ENST00000375759 DPM3Q9P2X0 92 aa8.28□□□□□ -1.08
SPEN-201ENST00000375759 FBXL7Q9UJT9 491 aa8.28□□□□□ -1.08
SPEN-201ENST00000375759 GREB1LQ9C091 1923 aaPredicted RBP8.28□□□□□ -1.08
SPEN-201ENST00000375759 LY6EQ16553 131 aa8.28□□□□□ -1.08
SPEN-201ENST00000375759 SMPXQ9UHP9 88 aa8.28□□□□□ -1.08
SPEN-201ENST00000375759 F2Z2F3 143 aa8.28□□□□□ -1.08
SPEN-201ENST00000375759 C1QTNF5Q9BXJ0 243 aa8.28□□□□□ -1.08
SPEN-201ENST00000375759 GGTLC3B5MD39 225 aa8.27□□□□□ -1.08
SPEN-201ENST00000375759 TBX6O95947 436 aaPredicted RBP8.27□□□□□ -1.08
SPEN-201ENST00000375759 IL9P15248 144 aa8.27□□□□□ -1.08
SPEN-201ENST00000375759 PDLIM4P50479 330 aa8.27□□□□□ -1.08
SPEN-201ENST00000375759 IGLV3-21P80748 117 aaPredicted RBP8.27□□□□□ -1.08
SPEN-201ENST00000375759 CFHR5Q9BXR6 569 aa8.27□□□□□ -1.08
SPEN-201ENST00000375759 LTBP4Q8N2S1 1624 aa8.27□□□□□ -1.08
SPEN-201ENST00000375759 TDGF1P13385 188 aa8.27□□□□□ -1.08
SPEN-201ENST00000375759 C1orf162Q8NEQ5 155 aaPredicted RBP8.27□□□□□ -1.08
SPEN-201ENST00000375759 TNFSF13O75888 250 aa8.27□□□□□ -1.09
SPEN-201ENST00000375759 GAGE2BQ13066 116 aa8.27□□□□□ -1.09
SPEN-201ENST00000375759 GAGE2EQ4V326 116 aa8.27□□□□□ -1.09
SPEN-201ENST00000375759 GAGE2DQ9UEU5 116 aa8.27□□□□□ -1.09
SPEN-201ENST00000375759 HS3ST3B1Q9Y662 390 aa8.27□□□□□ -1.09
SPEN-201ENST00000375759 ATXN7O15265 892 aaPredicted RBP8.27□□□□□ -1.09
SPEN-201ENST00000375759 PLPPR1Q8TBJ4 325 aa8.27□□□□□ -1.09
SPEN-201ENST00000375759 FAM90A9PA6NNJ1 464 aa8.27□□□□□ -1.09
SPEN-201ENST00000375759 ZNF815PA8K554 130 aa8.27□□□□□ -1.09
SPEN-201ENST00000375759 PROB1E7EW31 1015 aa8.27□□□□□ -1.09
SPEN-201ENST00000375759 IGHV3-35A0A0C4DH35 117 aa8.27□□□□□ -1.09
SPEN-201ENST00000375759 A0A1W2PRE2 83 aa8.27□□□□□ -1.09
SPEN-201ENST00000375759 RASL11AQ6T310 242 aa8.27□□□□□ -1.09
SPEN-201ENST00000375759 MGST2Q99735 147 aa8.27□□□□□ -1.09
SPEN-201ENST00000375759 SLC50A1Q9BRV3 221 aa8.27□□□□□ -1.09
SPEN-201ENST00000375759 COL11A2P13942 1736 aaPredicted RBP8.27□□□□□ -1.09
SPEN-201ENST00000375759 SHISA3A0PJX4 238 aa8.27□□□□□ -1.09
SPEN-201ENST00000375759 C15orf61A6NNL5 157 aa8.27□□□□□ -1.09
SPEN-201ENST00000375759 IGFBP3P17936 291 aaPredicted RBP8.27□□□□□ -1.09
SPEN-201ENST00000375759 ATXN8Q156A1 80 aa8.27□□□□□ -1.09
SPEN-201ENST00000375759 FOXL2P58012 376 aa8.27□□□□□ -1.09
SPEN-201ENST00000375759 SRSF4Q08170 494 aaKnown RBP8.27□□□□□ -1.09
SPEN-201ENST00000375759 ZNF479Q96JC4 524 aa8.27□□□□□ -1.09
SPEN-201ENST00000375759 C4orf51C9J302 202 aa8.27□□□□□ -1.09
SPEN-201ENST00000375759 APOBEC3AP31941 199 aaPredicted RBP8.27□□□□□ -1.09
SPEN-201ENST00000375759 LOXL4Q96JB6 756 aa8.27□□□□□ -1.09
SPEN-201ENST00000375759 CCL19Q99731 98 aa8.27□□□□□ -1.09
SPEN-201ENST00000375759 CHTOPQ9Y3Y2 248 aaKnown RBP8.27□□□□□ -1.09
SPEN-201ENST00000375759 IGKV1D-33P01593 117 aa8.26□□□□□ -1.09
SPEN-201ENST00000375759 IGKV1-33P01594 117 aa8.26□□□□□ -1.09
SPEN-201ENST00000375759 FAM57AQ8TBR7 257 aa8.26□□□□□ -1.09
SPEN-201ENST00000375759 TMEM42Q69YG0 159 aa8.26□□□□□ -1.09
SPEN-201ENST00000375759 ATP5J2P56134 94 aa8.26□□□□□ -1.09
SPEN-201ENST00000375759 MRPL52Q86TS9 123 aaKnown RBP8.26□□□□□ -1.09
SPEN-201ENST00000375759 TRAV21A0A0B4J279 112 aa8.26□□□□□ -1.09
SPEN-201ENST00000375759 FOXD3Q9UJU5 478 aaPredicted RBP8.26□□□□□ -1.09
SPEN-201ENST00000375759 EPDR1Q9UM22 224 aa8.26□□□□□ -1.09
SPEN-201ENST00000375759 LINC00312Q9Y6C7 94 aa8.26□□□□□ -1.09
SPEN-201ENST00000375759 CSRP3P50461 194 aa8.26□□□□□ -1.09
SPEN-201ENST00000375759 MUC21A0A0G2JKD1 596 aa8.26□□□□□ -1.09
SPEN-201ENST00000375759 MUC21A0A140T8X8 626 aa8.26□□□□□ -1.09
SPEN-201ENST00000375759 SPAARA0A1B0GVQ0 90 aa8.26□□□□□ -1.09
SPEN-201ENST00000375759 MPZP25189 248 aa8.26□□□□□ -1.09
SPEN-201ENST00000375759 MUC21Q5SSG8 566 aa8.26□□□□□ -1.09
SPEN-201ENST00000375759 REPIN1Q9BWE0 567 aaKnown RBP8.26□□□□□ -1.09
SPEN-201ENST00000375759 FBXL15Q9H469 300 aa8.26□□□□□ -1.09
SPEN-201ENST00000375759 TRBV24-1A0A075B6N3 115 aa8.26□□□□□ -1.09
SPEN-201ENST00000375759 PATE3B3GLJ2 98 aa8.26□□□□□ -1.09
SPEN-201ENST00000375759 PCOLCEQ15113 449 aa8.26□□□□□ -1.09
SPEN-201ENST00000375759 PVRIGQ6DKI7 326 aa8.26□□□□□ -1.09
SPEN-201ENST00000375759 HIST3H2BBQ8N257 126 aa8.26□□□□□ -1.09
SPEN-201ENST00000375759 TSKUQ8WUA8 353 aa8.26□□□□□ -1.09
SPEN-201ENST00000375759 SEPSECSQ9HD40 501 aaKnown RBP8.26□□□□□ -1.09
SPEN-201ENST00000375759 TCF20Q9UGU0 1960 aaKnown RBP8.26□□□□□ -1.09
SPEN-201ENST00000375759 IGHV3-66A0A0C4DH42 116 aa8.25□□□□□ -1.09
SPEN-201ENST00000375759 BTCP35070 178 aa8.25□□□□□ -1.09
SPEN-201ENST00000375759 SPANXA1Q9NS26 97 aa8.25□□□□□ -1.09
SPEN-201ENST00000375759 PPP1R27Q86WC6 154 aa8.25□□□□□ -1.09
SPEN-201ENST00000375759 TMEM238C9JI98 176 aa8.25□□□□□ -1.09
SPEN-201ENST00000375759 ZNHIT1O43257 154 aa8.25□□□□□ -1.09
SPEN-201ENST00000375759 FGF16O43320 207 aa8.25□□□□□ -1.09
SPEN-201ENST00000375759 MYOD1P15172 320 aa8.25□□□□□ -1.09
SPEN-201ENST00000375759 TMEM86BQ8N661 226 aa8.25□□□□□ -1.09
SPEN-201ENST00000375759 GTF3AQ92664 365 aaKnown RBP8.25□□□□□ -1.09
SPEN-201ENST00000375759 TRBV6-7A0A0A0MS04 114 aa8.25□□□□□ -1.09
SPEN-201ENST00000375759 M0R2P5 195 aa8.25□□□□□ -1.09
SPEN-201ENST00000375759 CRPP02741 224 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms