RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 FZR1Q9UM11 496 aa10.02□□□□□ -0.81
C9orf3-203ENST00000375315 CACNA1AO00555 2505 aa10.01□□□□□ -0.81
C9orf3-203ENST00000375315 NPIPB11E5RHQ5 1161 aa10.01□□□□□ -0.81
C9orf3-203ENST00000375315 SYS1-DBNDD2H3BUS1 97 aa10.01□□□□□ -0.81
C9orf3-203ENST00000375315 MGST1P10620 155 aaKnown RBP10.01□□□□□ -0.81
C9orf3-203ENST00000375315 SMAGPQ0VAQ4 97 aa10.01□□□□□ -0.81
C9orf3-203ENST00000375315 KIR3DL3Q8N743 410 aa10.01□□□□□ -0.81
C9orf3-203ENST00000375315 OR5A1Q8NGJ0 315 aa10.01□□□□□ -0.81
C9orf3-203ENST00000375315 OR2K2Q8NGT1 345 aa10.01□□□□□ -0.81
C9orf3-203ENST00000375315 ZDHHC16Q969W1 377 aa10.01□□□□□ -0.81
C9orf3-203ENST00000375315 A6NDN8 102 aa10.01□□□□□ -0.81
C9orf3-203ENST00000375315 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.01□□□□□ -0.81
C9orf3-203ENST00000375315 G6PCP35575 357 aa10.01□□□□□ -0.81
C9orf3-203ENST00000375315 IBA57Q5T440 356 aaKnown RBP10.01□□□□□ -0.81
C9orf3-203ENST00000375315 IGF2-ASQ6U949 168 aa10.01□□□□□ -0.81
C9orf3-203ENST00000375315 C20orf204Q6ZNR8 217 aa10.01□□□□□ -0.81
C9orf3-203ENST00000375315 WIPF2Q8TF74 440 aaPredicted RBP10.01□□□□□ -0.81
C9orf3-203ENST00000375315 GTSF1LQ9H1H1 148 aa10.01□□□□□ -0.81
C9orf3-203ENST00000375315 JKAMPQ9P055 326 aa10.01□□□□□ -0.81
C9orf3-203ENST00000375315 H3BRM9 83 aa10□□□□□ -0.81
C9orf3-203ENST00000375315 CLDN14O95500 239 aa10□□□□□ -0.81
C9orf3-203ENST00000375315 BPIFA4PQ86YQ2 179 aa10□□□□□ -0.81
C9orf3-203ENST00000375315 BSNQ9UPA5 3926 aa10□□□□□ -0.81
C9orf3-203ENST00000375315 RHBDL1O75783 438 aa10□□□□□ -0.81
C9orf3-203ENST00000375315 HBZP02008 142 aa10□□□□□ -0.81
C9orf3-203ENST00000375315 AREGP15514 252 aa10□□□□□ -0.81
C9orf3-203ENST00000375315 PLP2Q04941 152 aa10□□□□□ -0.81
C9orf3-203ENST00000375315 TMEM97Q5BJF2 176 aa10□□□□□ -0.81
C9orf3-203ENST00000375315 DRAM1Q8N682 238 aa10□□□□□ -0.81
C9orf3-203ENST00000375315 ZNF48Q96MX3 618 aaPredicted RBP10□□□□□ -0.81
C9orf3-203ENST00000375315 MSRB2Q9Y3D2 182 aa10□□□□□ -0.81
C9orf3-203ENST00000375315 GPM6AP51674 278 aa10□□□□□ -0.81
C9orf3-203ENST00000375315 IGFL2Q6UWQ7 119 aa10□□□□□ -0.81
C9orf3-203ENST00000375315 MDP1Q86V88 176 aa10□□□□□ -0.81
C9orf3-203ENST00000375315 HS3ST6Q96QI5 342 aa10□□□□□ -0.81
C9orf3-203ENST00000375315 PPIAL4EA0A075B759 164 aa9.99□□□□□ -0.81
C9orf3-203ENST00000375315 PPIAL4CA0A0B4J2A2 164 aa9.99□□□□□ -0.81
C9orf3-203ENST00000375315 C22orf46C9J442 243 aa9.99□□□□□ -0.81
C9orf3-203ENST00000375315 H3BUT2 72 aa9.99□□□□□ -0.81
C9orf3-203ENST00000375315 PPIAL4FP0DN26 164 aa9.99□□□□□ -0.81
C9orf3-203ENST00000375315 HIST1H1EP10412 219 aaKnown RBP9.99□□□□□ -0.81
C9orf3-203ENST00000375315 RPL8P62917 257 aaKnown RBP9.99□□□□□ -0.81
C9orf3-203ENST00000375315 MIC13Q5XKP0 118 aa9.99□□□□□ -0.81
C9orf3-203ENST00000375315 WDR82Q6UXN9 313 aa9.99□□□□□ -0.81
C9orf3-203ENST00000375315 FAM214BQ7L5A3 538 aa9.99□□□□□ -0.81
C9orf3-203ENST00000375315 OR10AG1Q8NH19 301 aa9.99□□□□□ -0.81
C9orf3-203ENST00000375315 NPFFR1Q9GZQ6 430 aa9.99□□□□□ -0.81
C9orf3-203ENST00000375315 IGKV3D-15A0A087WSY6 115 aa9.99□□□□□ -0.81
C9orf3-203ENST00000375315 A6NJY4 79 aa9.99□□□□□ -0.81
C9orf3-203ENST00000375315 LEPROTL1O95214 131 aa9.99□□□□□ -0.81
C9orf3-203ENST00000375315 Q6ZS92 163 aa9.99□□□□□ -0.81
C9orf3-203ENST00000375315 C15orf62A8K5M9 175 aa9.98□□□□□ -0.81
C9orf3-203ENST00000375315 IGHV1-2P23083 117 aa9.98□□□□□ -0.81
C9orf3-203ENST00000375315 RAB9AP51151 201 aa9.98□□□□□ -0.81
C9orf3-203ENST00000375315 MFAP2P55001 183 aa9.98□□□□□ -0.81
C9orf3-203ENST00000375315 PCBD1P61457 104 aa9.98□□□□□ -0.81
C9orf3-203ENST00000375315 RPL24P83731 157 aaKnown RBP9.98□□□□□ -0.81
C9orf3-203ENST00000375315 HSD52Q0P140 79 aa9.98□□□□□ -0.81
C9orf3-203ENST00000375315 ZNF816Q0VGE8 651 aaPredicted RBP9.98□□□□□ -0.81
C9orf3-203ENST00000375315 LINC00596Q86U02 117 aa9.98□□□□□ -0.81
C9orf3-203ENST00000375315 CEACAM4O75871 244 aa9.98□□□□□ -0.81
C9orf3-203ENST00000375315 CEACAM3P40198 252 aa9.98□□□□□ -0.81
C9orf3-203ENST00000375315 KIR2DL2P43627 348 aaPredicted RBP9.98□□□□□ -0.81
C9orf3-203ENST00000375315 SPINK9Q5DT21 86 aa9.98□□□□□ -0.81
C9orf3-203ENST00000375315 H2BFWTQ7Z2G1 175 aa9.98□□□□□ -0.81
C9orf3-203ENST00000375315 SSBP4Q9BWG4 385 aaPredicted RBP9.98□□□□□ -0.81
C9orf3-203ENST00000375315 PLSCR4Q9NRQ2 329 aa9.98□□□□□ -0.81
C9orf3-203ENST00000375315 P0C879 139 aa9.98□□□□□ -0.81
C9orf3-203ENST00000375315 RAB31Q13636 194 aa9.98□□□□□ -0.81
C9orf3-203ENST00000375315 GFRALQ6UXV0 394 aa9.98□□□□□ -0.81
C9orf3-203ENST00000375315 MOB1BQ7L9L4 216 aa9.98□□□□□ -0.81
C9orf3-203ENST00000375315 OR2V2Q96R30 315 aa9.98□□□□□ -0.81
C9orf3-203ENST00000375315 JMJD8Q96S16 334 aa9.98□□□□□ -0.81
C9orf3-203ENST00000375315 GGTLC1Q9BX51 225 aa9.98□□□□□ -0.81
C9orf3-203ENST00000375315 ZNF835Q9Y2P0 537 aa9.98□□□□□ -0.81
C9orf3-203ENST00000375315 A0A0G2JLM5 398 aa9.97□□□□□ -0.81
C9orf3-203ENST00000375315 OR2J3O76001 311 aa9.97□□□□□ -0.81
C9orf3-203ENST00000375315 IGHG3P01860 377 aa9.97□□□□□ -0.81
C9orf3-203ENST00000375315 MC5RP33032 325 aa9.97□□□□□ -0.81
C9orf3-203ENST00000375315 UQCRFS1P47985 274 aa9.97□□□□□ -0.81
C9orf3-203ENST00000375315 FABP6P51161 128 aa9.97□□□□□ -0.81
C9orf3-203ENST00000375315 CKS1BP61024 79 aa9.97□□□□□ -0.81
C9orf3-203ENST00000375315 CATR1Q13166 79 aa9.97□□□□□ -0.81
C9orf3-203ENST00000375315 LY6DQ14210 128 aa9.97□□□□□ -0.81
C9orf3-203ENST00000375315 ALKBH6Q3KRA9 238 aa9.97□□□□□ -0.81
C9orf3-203ENST00000375315 MRPL21Q7Z2W9 205 aaKnown RBP9.97□□□□□ -0.81
C9orf3-203ENST00000375315 OR4A5Q8NH83 315 aa9.97□□□□□ -0.81
C9orf3-203ENST00000375315 SNRNP40Q96DI7 357 aaKnown RBP9.97□□□□□ -0.81
C9orf3-203ENST00000375315 MAP1LC3CQ9BXW4 147 aa9.97□□□□□ -0.81
C9orf3-203ENST00000375315 SELENOKQ9Y6D0 94 aa9.97□□□□□ -0.81
C9orf3-203ENST00000375315 EPG5Q9HCE0 2579 aa9.97□□□□□ -0.81
C9orf3-203ENST00000375315 PSMB11A5LHX3 300 aa9.97□□□□□ -0.81
C9orf3-203ENST00000375315 K7ENP7 123 aa9.97□□□□□ -0.81
C9orf3-203ENST00000375315 COX8AP10176 69 aa9.97□□□□□ -0.81
C9orf3-203ENST00000375315 INO80CQ6PI98 192 aaPredicted RBP9.97□□□□□ -0.81
C9orf3-203ENST00000375315 TREML4Q6UXN2 200 aa9.97□□□□□ -0.81
C9orf3-203ENST00000375315 VSTM2AQ8TAG5 236 aa9.97□□□□□ -0.81
C9orf3-203ENST00000375315 DKK4Q9UBT3 224 aa9.97□□□□□ -0.81
C9orf3-203ENST00000375315 SPCS1Q9Y6A9 102 aa9.97□□□□□ -0.81
C9orf3-203ENST00000375315 CACNA1DQ01668 2161 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms