RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 SSBP3Q9BWW4 388 aaPredicted RBP8.53□□□□□ -1.04
PTCH1-204ENST00000375290 OTX1P32242 354 aaPredicted RBP8.53□□□□□ -1.04
PTCH1-204ENST00000375290 FOXA3P55318 350 aaPredicted RBP8.53□□□□□ -1.04
PTCH1-204ENST00000375290 KLRB1Q12918 225 aa8.53□□□□□ -1.04
PTCH1-204ENST00000375290 ZNF664Q8N3J9 261 aa8.53□□□□□ -1.04
PTCH1-204ENST00000375290 F11RQ9Y624 299 aaKnown RBP8.53□□□□□ -1.04
PTCH1-204ENST00000375290 LOC102723996A0A087X1L8 192 aa8.52□□□□□ -1.04
PTCH1-204ENST00000375290 ALKBH6Q3KRA9 238 aa8.52□□□□□ -1.04
PTCH1-204ENST00000375290 DOCK11Q5JSL3 2073 aa8.52□□□□□ -1.04
PTCH1-204ENST00000375290 RPP25LQ8N5L8 163 aaKnown RBP8.52□□□□□ -1.04
PTCH1-204ENST00000375290 TRAV21A0A0B4J279 112 aa8.52□□□□□ -1.05
PTCH1-204ENST00000375290 IGHV1-24A0A0C4DH33 117 aa8.52□□□□□ -1.05
PTCH1-204ENST00000375290 MOSP00540 346 aa8.52□□□□□ -1.05
PTCH1-204ENST00000375290 LEPP41159 167 aa8.52□□□□□ -1.05
PTCH1-204ENST00000375290 TRIP6Q15654 476 aaKnown RBP8.52□□□□□ -1.05
PTCH1-204ENST00000375290 MEIG1Q5JSS6 88 aa8.52□□□□□ -1.05
PTCH1-204ENST00000375290 CEACAM4O75871 244 aa8.52□□□□□ -1.05
PTCH1-204ENST00000375290 TNFRSF18Q9Y5U5 241 aa8.52□□□□□ -1.05
PTCH1-204ENST00000375290 PLXNA4Q9HCM2 1894 aa8.52□□□□□ -1.05
PTCH1-204ENST00000375290 LGALS1P09382 135 aaKnown RBP8.52□□□□□ -1.05
PTCH1-204ENST00000375290 PLEKHB2Q96CS7 222 aa8.52□□□□□ -1.05
PTCH1-204ENST00000375290 TMSB15BA0A087X1C1 80 aa8.52□□□□□ -1.05
PTCH1-204ENST00000375290 C1QL2Q7Z5L3 287 aa8.52□□□□□ -1.05
PTCH1-204ENST00000375290 CNTFRP26992 372 aa8.52□□□□□ -1.05
PTCH1-204ENST00000375290 MORN2Q502X0 79 aa8.52□□□□□ -1.05
PTCH1-204ENST00000375290 DYNLRB2Q8TF09 96 aa8.52□□□□□ -1.05
PTCH1-204ENST00000375290 C21orf62Q9NYP8 219 aa8.52□□□□□ -1.05
PTCH1-204ENST00000375290 DPM3Q9P2X0 92 aa8.52□□□□□ -1.05
PTCH1-204ENST00000375290 PPIAL4CA0A0B4J2A2 164 aa8.52□□□□□ -1.05
PTCH1-204ENST00000375290 WNT2P09544 360 aa8.52□□□□□ -1.05
PTCH1-204ENST00000375290 PPIAL4GP0DN37 164 aa8.52□□□□□ -1.05
PTCH1-204ENST00000375290 CRYGSP22914 178 aa8.52□□□□□ -1.05
PTCH1-204ENST00000375290 C9orf50Q5SZB4 431 aa8.52□□□□□ -1.05
PTCH1-204ENST00000375290 TMEM8BA6NDV4 472 aa8.52□□□□□ -1.05
PTCH1-204ENST00000375290 TBX6O95947 436 aaPredicted RBP8.52□□□□□ -1.05
PTCH1-204ENST00000375290 REG1BP48304 166 aa8.52□□□□□ -1.05
PTCH1-204ENST00000375290 PMVKQ15126 192 aa8.52□□□□□ -1.05
PTCH1-204ENST00000375290 RRN3P1Q2M238 152 aa8.52□□□□□ -1.05
PTCH1-204ENST00000375290 CCL13Q99616 98 aa8.52□□□□□ -1.05
PTCH1-204ENST00000375290 NHP2Q9NX24 153 aaKnown RBP8.52□□□□□ -1.05
PTCH1-204ENST00000375290 MST1P26927 711 aa8.51□□□□□ -1.05
PTCH1-204ENST00000375290 PMS2CLQ68D20 193 aa8.51□□□□□ -1.05
PTCH1-204ENST00000375290 C16orf47Q6ZP98 133 aaPredicted RBP8.51□□□□□ -1.05
PTCH1-204ENST00000375290 ADCYAP1P18509 176 aa8.51□□□□□ -1.05
PTCH1-204ENST00000375290 ZNF56Q15929 161 aa8.51□□□□□ -1.05
PTCH1-204ENST00000375290 FAM19A2Q8N3H0 131 aa8.51□□□□□ -1.05
PTCH1-204ENST00000375290 MRAP2Q96G30 205 aa8.51□□□□□ -1.05
PTCH1-204ENST00000375290 ZNF492Q9P255 531 aa8.51□□□□□ -1.05
PTCH1-204ENST00000375290 IGKV1-9A0A0C4DH69 117 aa8.51□□□□□ -1.05
PTCH1-204ENST00000375290 FOXH1O75593 365 aa8.51□□□□□ -1.05
PTCH1-204ENST00000375290 WBP1Q96G27 269 aa8.51□□□□□ -1.05
PTCH1-204ENST00000375290 WDR90Q96KV7 1748 aa8.51□□□□□ -1.05
PTCH1-204ENST00000375290 NPFFO15130 113 aa8.51□□□□□ -1.05
PTCH1-204ENST00000375290 LHX2P50458 406 aa8.51□□□□□ -1.05
PTCH1-204ENST00000375290 SSBP2P81877 361 aaPredicted RBP8.51□□□□□ -1.05
PTCH1-204ENST00000375290 RNASE7Q9H1E1 156 aaKnown RBP8.51□□□□□ -1.05
PTCH1-204ENST00000375290 ZNF418Q8TF45 676 aaPredicted RBP8.51□□□□□ -1.05
PTCH1-204ENST00000375290 MPDZO75970 2070 aa8.51□□□□□ -1.05
PTCH1-204ENST00000375290 ZIC4Q8N9L1 334 aa8.51□□□□□ -1.05
PTCH1-204ENST00000375290 RNF125Q96EQ8 232 aa8.5□□□□□ -1.05
PTCH1-204ENST00000375290 ARRDC1-AS1Q9H2J1 176 aa8.5□□□□□ -1.05
PTCH1-204ENST00000375290 ECSCRQ19T08 205 aa8.5□□□□□ -1.05
PTCH1-204ENST00000375290 CITED1Q99966 193 aa8.5□□□□□ -1.05
PTCH1-204ENST00000375290 COL4A1P02462 1669 aa8.5□□□□□ -1.05
PTCH1-204ENST00000375290 DOCK9Q9BZ29 2069 aa8.5□□□□□ -1.05
PTCH1-204ENST00000375290 C17orf98A8MV24 154 aa8.5□□□□□ -1.05
PTCH1-204ENST00000375290 SLC25A20O43772 301 aa8.5□□□□□ -1.05
PTCH1-204ENST00000375290 RIPPLY3P57055 190 aa8.5□□□□□ -1.05
PTCH1-204ENST00000375290 DNAJC30Q96LL9 226 aa8.5□□□□□ -1.05
PTCH1-204ENST00000375290 OVOL1O14753 267 aa8.5□□□□□ -1.05
PTCH1-204ENST00000375290 FAM90A2PQ658T7 463 aa8.5□□□□□ -1.05
PTCH1-204ENST00000375290 A0A1W2PR80 420 aa8.5□□□□□ -1.05
PTCH1-204ENST00000375290 CDKN1BP46527 198 aa8.5□□□□□ -1.05
PTCH1-204ENST00000375290 WIPF2Q8TF74 440 aaPredicted RBP8.5□□□□□ -1.05
PTCH1-204ENST00000375290 NEU4Q8WWR8 484 aaPredicted RBP8.5□□□□□ -1.05
PTCH1-204ENST00000375290 GGTLC1Q9BX51 225 aa8.5□□□□□ -1.05
PTCH1-204ENST00000375290 ERG28Q9UKR5 140 aa8.5□□□□□ -1.05
PTCH1-204ENST00000375290 FOXL2NBQ6ZUU3 175 aa8.5□□□□□ -1.05
PTCH1-204ENST00000375290 SRSF6Q13247 344 aaKnown RBP8.5□□□□□ -1.05
PTCH1-204ENST00000375290 MIR17HGQ75NE6 70 aa8.5□□□□□ -1.05
PTCH1-204ENST00000375290 OR11H6Q8NGC7 330 aa8.5□□□□□ -1.05
PTCH1-204ENST00000375290 SRXN1Q9BYN0 137 aa8.5□□□□□ -1.05
PTCH1-204ENST00000375290 CST9LQ9H4G1 147 aa8.5□□□□□ -1.05
PTCH1-204ENST00000375290 ITLN1Q8WWA0 313 aa8.49□□□□□ -1.05
PTCH1-204ENST00000375290 TOMM40O96008 361 aa8.49□□□□□ -1.05
PTCH1-204ENST00000375290 COL9A2Q14055 689 aaPredicted RBP8.49□□□□□ -1.05
PTCH1-204ENST00000375290 FZR1Q9UM11 496 aa8.49□□□□□ -1.05
PTCH1-204ENST00000375290 FRMPD3Q5JV73 1810 aa8.49□□□□□ -1.05
PTCH1-204ENST00000375290 PDLIM4P50479 330 aa8.49□□□□□ -1.05
PTCH1-204ENST00000375290 UNQ5815/PRO19632Q6UWF5 114 aa8.49□□□□□ -1.05
PTCH1-204ENST00000375290 SUMO2P61956 95 aaKnown RBP8.49□□□□□ -1.05
PTCH1-204ENST00000375290 SAP25Q8TEE9 199 aa8.49□□□□□ -1.05
PTCH1-204ENST00000375290 CHAC1Q9BUX1 264 aa8.49□□□□□ -1.05
PTCH1-204ENST00000375290 KMT2EQ8IZD2 1858 aa8.49□□□□□ -1.05
PTCH1-204ENST00000375290 H7C2G1 150 aa8.49□□□□□ -1.05
PTCH1-204ENST00000375290 OR10W1Q8NGF6 305 aa8.49□□□□□ -1.05
PTCH1-204ENST00000375290 FNDC4Q9H6D8 234 aaPredicted RBP8.49□□□□□ -1.05
PTCH1-204ENST00000375290 HCP5Q6MZN7 132 aa8.49□□□□□ -1.05
PTCH1-204ENST00000375290 TMEM75Q8N9X5 138 aa8.49□□□□□ -1.05
PTCH1-204ENST00000375290 LRRK1Q38SD2 2015 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms