RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 PRAMEF6Q5VXH4 476 aa10.58□□□□□ -0.72
PRPF4-201ENST00000374198 Q6ZR03 302 aa10.58□□□□□ -0.72
PRPF4-201ENST00000374198 BHLHA15Q7RTS1 189 aaPredicted RBP10.58□□□□□ -0.72
PRPF4-201ENST00000374198 LINC00479Q96M42 142 aa10.58□□□□□ -0.72
PRPF4-201ENST00000374198 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.58□□□□□ -0.72
PRPF4-201ENST00000374198 GAGE12HA6NDE8 117 aa10.58□□□□□ -0.72
PRPF4-201ENST00000374198 C12orf77C9JDV5 145 aa10.58□□□□□ -0.72
PRPF4-201ENST00000374198 DNPH1O43598 174 aa10.58□□□□□ -0.72
PRPF4-201ENST00000374198 NGFP01138 241 aa10.58□□□□□ -0.72
PRPF4-201ENST00000374198 ZNF883P0CG24 379 aa10.58□□□□□ -0.72
PRPF4-201ENST00000374198 CD24P25063 80 aa10.58□□□□□ -0.72
PRPF4-201ENST00000374198 CKS1BP61024 79 aa10.58□□□□□ -0.72
PRPF4-201ENST00000374198 PLXDC1Q8IUK5 500 aa10.58□□□□□ -0.72
PRPF4-201ENST00000374198 RAB37Q96AX2 223 aa10.58□□□□□ -0.72
PRPF4-201ENST00000374198 NABP2Q9BQ15 211 aa10.58□□□□□ -0.72
PRPF4-201ENST00000374198 PLSCR4Q9NRQ2 329 aa10.58□□□□□ -0.72
PRPF4-201ENST00000374198 CABIN1Q9Y6J0 2220 aa10.58□□□□□ -0.72
PRPF4-201ENST00000374198 TRAV26-1A0A087WT03 109 aa10.57□□□□□ -0.72
PRPF4-201ENST00000374198 IGHV1OR21-1A0A087WYE8 117 aa10.57□□□□□ -0.72
PRPF4-201ENST00000374198 FAM90A9PA6NNJ1 464 aa10.57□□□□□ -0.72
PRPF4-201ENST00000374198 J3QT63 122 aa10.57□□□□□ -0.72
PRPF4-201ENST00000374198 FAM216AQ8WUB2 273 aa10.57□□□□□ -0.72
PRPF4-201ENST00000374198 MPC1Q9Y5U8 109 aa10.57□□□□□ -0.72
PRPF4-201ENST00000374198 SS18L1O75177 396 aaPredicted RBP10.57□□□□□ -0.72
PRPF4-201ENST00000374198 HBBP68871 147 aa10.57□□□□□ -0.72
PRPF4-201ENST00000374198 PRRG4Q9BZD6 226 aa10.57□□□□□ -0.72
PRPF4-201ENST00000374198 EML6Q6ZMW3 1958 aa10.57□□□□□ -0.72
PRPF4-201ENST00000374198 SPAARA0A1B0GVQ0 90 aa10.56□□□□□ -0.72
PRPF4-201ENST00000374198 IGHV3-9P01782 118 aa10.56□□□□□ -0.72
PRPF4-201ENST00000374198 FTH1P19P0C7X4 201 aa10.56□□□□□ -0.72
PRPF4-201ENST00000374198 DUTP33316 252 aaKnown RBP10.56□□□□□ -0.72
PRPF4-201ENST00000374198 CRYBA4P53673 196 aa10.56□□□□□ -0.72
PRPF4-201ENST00000374198 RTL8BQ17RB0 113 aa10.56□□□□□ -0.72
PRPF4-201ENST00000374198 PIP4P1Q86T03 277 aa10.56□□□□□ -0.72
PRPF4-201ENST00000374198 PLPPR2Q96GM1 343 aa10.56□□□□□ -0.72
PRPF4-201ENST00000374198 ZNF48Q96MX3 618 aaPredicted RBP10.56□□□□□ -0.72
PRPF4-201ENST00000374198 ZNF257Q9Y2Q1 563 aa10.56□□□□□ -0.72
PRPF4-201ENST00000374198 TSSC4Q9Y5U2 329 aaPredicted RBP10.56□□□□□ -0.72
PRPF4-201ENST00000374198 LAMA1P25391 3075 aa10.56□□□□□ -0.72
PRPF4-201ENST00000374198 CCL3P10147 92 aa10.56□□□□□ -0.72
PRPF4-201ENST00000374198 FABP2P12104 132 aa10.56□□□□□ -0.72
PRPF4-201ENST00000374198 CCDC144NLQ6NUI1 221 aa10.55□□□□□ -0.72
PRPF4-201ENST00000374198 TEX45Q8NA69 505 aa10.55□□□□□ -0.72
PRPF4-201ENST00000374198 PROK2Q9HC23 129 aa10.55□□□□□ -0.72
PRPF4-201ENST00000374198 TMEM30CPA0ZSE6 113 aa10.55□□□□□ -0.72
PRPF4-201ENST00000374198 FAM87AP0C7U9 286 aa10.55□□□□□ -0.72
PRPF4-201ENST00000374198 MC5RP33032 325 aa10.55□□□□□ -0.72
PRPF4-201ENST00000374198 TAS2R45P59539 299 aa10.55□□□□□ -0.72
PRPF4-201ENST00000374198 GUSBP1Q15486 140 aa10.55□□□□□ -0.72
PRPF4-201ENST00000374198 ZNF788Q6ZQV5 615 aa10.55□□□□□ -0.72
PRPF4-201ENST00000374198 FA2HQ7L5A8 372 aa10.55□□□□□ -0.72
PRPF4-201ENST00000374198 DPF1Q92782 380 aa10.55□□□□□ -0.72
PRPF4-201ENST00000374198 LOXL2Q9Y4K0 774 aa10.55□□□□□ -0.72
PRPF4-201ENST00000374198 A0A096LPE4 126 aa10.54□□□□□ -0.72
PRPF4-201ENST00000374198 A0A1W2PPZ6 126 aa10.54□□□□□ -0.72
PRPF4-201ENST00000374198 CXCL13O43927 109 aa10.54□□□□□ -0.72
PRPF4-201ENST00000374198 FCGR3BO75015 233 aa10.54□□□□□ -0.72
PRPF4-201ENST00000374198 ZNF138P52744 262 aa10.54□□□□□ -0.72
PRPF4-201ENST00000374198 ERVK11-1P61568 191 aa10.54□□□□□ -0.72
PRPF4-201ENST00000374198 NRN1LQ496H8 165 aa10.54□□□□□ -0.72
PRPF4-201ENST00000374198 SAP25Q8TEE9 199 aa10.54□□□□□ -0.72
PRPF4-201ENST00000374198 TCF19Q9Y242 345 aa10.54□□□□□ -0.72
PRPF4-201ENST00000374198 OOEPA6NGQ2 149 aa10.54□□□□□ -0.72
PRPF4-201ENST00000374198 SP1P08047 785 aa10.54□□□□□ -0.72
PRPF4-201ENST00000374198 ADH4P08319 380 aa10.54□□□□□ -0.72
PRPF4-201ENST00000374198 FOXF2Q12947 444 aa10.54□□□□□ -0.72
PRPF4-201ENST00000374198 CFAP161Q6P656 301 aa10.54□□□□□ -0.72
PRPF4-201ENST00000374198 Q8IYB0 196 aa10.54□□□□□ -0.72
PRPF4-201ENST00000374198 VKORC1L1Q8N0U8 176 aa10.54□□□□□ -0.72
PRPF4-201ENST00000374198 STXBP6Q8NFX7 210 aa10.54□□□□□ -0.72
PRPF4-201ENST00000374198 AMMECR1Q9Y4X0 333 aaPredicted RBP10.54□□□□□ -0.72
PRPF4-201ENST00000374198 PCNX2A6NKB5 2137 aa10.54□□□□□ -0.72
PRPF4-201ENST00000374198 LOC102723996A0A087X1L8 192 aa10.54□□□□□ -0.72
PRPF4-201ENST00000374198 TRAV3A0A0B4J244 114 aa10.54□□□□□ -0.72
PRPF4-201ENST00000374198 TRGV8A0A0C4DH27 118 aa10.54□□□□□ -0.72
PRPF4-201ENST00000374198 ZNF207O43670 478 aaKnown RBP10.54□□□□□ -0.72
PRPF4-201ENST00000374198 DUX1O43812 170 aa10.54□□□□□ -0.72
PRPF4-201ENST00000374198 ZNF146Q15072 292 aa10.54□□□□□ -0.72
PRPF4-201ENST00000374198 TCTEX1D4Q5JR98 221 aa10.54□□□□□ -0.72
PRPF4-201ENST00000374198 BOD1L2Q8IYS8 172 aa10.54□□□□□ -0.72
PRPF4-201ENST00000374198 Q8TCH9 128 aa10.54□□□□□ -0.72
PRPF4-201ENST00000374198 NANOS1Q8WY41 292 aaKnown RBP10.54□□□□□ -0.72
PRPF4-201ENST00000374198 ADTRPQ96IZ2 230 aa10.54□□□□□ -0.72
PRPF4-201ENST00000374198 SPATA25Q9BR10 227 aa10.54□□□□□ -0.72
PRPF4-201ENST00000374198 NDFIP1Q9BT67 221 aa10.54□□□□□ -0.72
PRPF4-201ENST00000374198 A1L4Q6 167 aa10.53□□□□□ -0.72
PRPF4-201ENST00000374198 FOXC1Q12948 553 aa10.53□□□□□ -0.72
PRPF4-201ENST00000374198 SAMD5Q5TGI4 173 aa10.53□□□□□ -0.72
PRPF4-201ENST00000374198 C9orf135Q5VTT2 229 aa10.53□□□□□ -0.72
PRPF4-201ENST00000374198 GGNQ86UU5 652 aa10.53□□□□□ -0.72
PRPF4-201ENST00000374198 TIMM8BQ9Y5J9 83 aaPredicted RBP10.53□□□□□ -0.72
PRPF4-201ENST00000374198 PSPNO60542 156 aa10.53□□□□□ -0.72
PRPF4-201ENST00000374198 B3GALT5-AS1P59052 145 aa10.53□□□□□ -0.72
PRPF4-201ENST00000374198 OR1C1Q15619 314 aa10.53□□□□□ -0.72
PRPF4-201ENST00000374198 ADAMTSL5Q6ZMM2 481 aa10.53□□□□□ -0.72
PRPF4-201ENST00000374198 FOXI2Q6ZQN5 318 aa10.53□□□□□ -0.72
PRPF4-201ENST00000374198 OR9G4Q8NGQ1 327 aa10.53□□□□□ -0.72
PRPF4-201ENST00000374198 TMUB1Q9BVT8 246 aa10.53□□□□□ -0.72
PRPF4-201ENST00000374198 C7orf69Q9H7B7 122 aa10.53□□□□□ -0.72
PRPF4-201ENST00000374198 MED12LQ86YW9 2145 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms