RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 SMPXQ9UHP9 88 aa9.6□□□□□ -0.87
VCL-202ENST00000372755 MIA3Q5JRA6 1907 aa9.6□□□□□ -0.87
VCL-202ENST00000372755 LOC102723996A0A087X1L8 192 aa9.59□□□□□ -0.87
VCL-202ENST00000372755 C1QTNF9P0C862 333 aa9.59□□□□□ -0.87
VCL-202ENST00000372755 IGKV1D-13A0A0B4J2D9 117 aa9.59□□□□□ -0.87
VCL-202ENST00000372755 IGKV1-13P0DP09 117 aa9.59□□□□□ -0.87
VCL-202ENST00000372755 PYYP10082 97 aa9.59□□□□□ -0.87
VCL-202ENST00000372755 SRSF6Q13247 344 aaKnown RBP9.59□□□□□ -0.87
VCL-202ENST00000372755 ATXN8Q156A1 80 aa9.59□□□□□ -0.87
VCL-202ENST00000372755 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.59□□□□□ -0.87
VCL-202ENST00000372755 E9PLN8 166 aa9.59□□□□□ -0.87
VCL-202ENST00000372755 SSC4DQ8WTU2 575 aa9.59□□□□□ -0.87
VCL-202ENST00000372755 GSN-AS1Q9NRJ2 163 aa9.59□□□□□ -0.87
VCL-202ENST00000372755 IGLV3-32A0A0A0MS00 114 aa9.59□□□□□ -0.87
VCL-202ENST00000372755 TRAV41A0A0B4J266 112 aa9.59□□□□□ -0.87
VCL-202ENST00000372755 TIMM23O14925 209 aa9.59□□□□□ -0.87
VCL-202ENST00000372755 CSRP1P21291 193 aaKnown RBP9.59□□□□□ -0.87
VCL-202ENST00000372755 TSKUQ8WUA8 353 aa9.59□□□□□ -0.87
VCL-202ENST00000372755 LINC00587B1AMM8 73 aa9.59□□□□□ -0.87
VCL-202ENST00000372755 CD5P06127 495 aa9.59□□□□□ -0.87
VCL-202ENST00000372755 UBE2DNLQ8IWF7 75 aa9.59□□□□□ -0.87
VCL-202ENST00000372755 ZNF415Q09FC8 603 aa9.58□□□□□ -0.88
VCL-202ENST00000372755 LINC00158P58513 81 aa9.58□□□□□ -0.88
VCL-202ENST00000372755 NSUN5P1Q3KNT7 163 aa9.58□□□□□ -0.88
VCL-202ENST00000372755 SPAG17Q6Q759 2223 aa9.58□□□□□ -0.88
VCL-202ENST00000372755 KIF13BQ9NQT8 1826 aa9.58□□□□□ -0.88
VCL-202ENST00000372755 IGHV1-18A0A0C4DH31 117 aa9.58□□□□□ -0.88
VCL-202ENST00000372755 DUTP33316 252 aaKnown RBP9.58□□□□□ -0.88
VCL-202ENST00000372755 ORAOV1Q8WV07 137 aa9.58□□□□□ -0.88
VCL-202ENST00000372755 RAMP3O60896 148 aa9.58□□□□□ -0.88
VCL-202ENST00000372755 M0R2P5 195 aa9.58□□□□□ -0.88
VCL-202ENST00000372755 CKS1BP61024 79 aa9.58□□□□□ -0.88
VCL-202ENST00000372755 EFNB3Q15768 340 aa9.58□□□□□ -0.88
VCL-202ENST00000372755 FAM89BQ8N5H3 189 aa9.58□□□□□ -0.88
VCL-202ENST00000372755 LYZL4Q96KX0 146 aa9.58□□□□□ -0.88
VCL-202ENST00000372755 RNF126Q9BV68 326 aa9.57□□□□□ -0.88
VCL-202ENST00000372755 CST9LQ9H4G1 147 aa9.57□□□□□ -0.88
VCL-202ENST00000372755 A8MWV9 139 aa9.57□□□□□ -0.88
VCL-202ENST00000372755 MYO16Q9Y6X6 1858 aa9.57□□□□□ -0.88
VCL-202ENST00000372755 MPZP25189 248 aa9.57□□□□□ -0.88
VCL-202ENST00000372755 SRSF7Q16629 238 aaKnown RBP eCLIP9.57□□□□□ -0.88
VCL-202ENST00000372755 TMEM238C9JI98 176 aa9.57□□□□□ -0.88
VCL-202ENST00000372755 CDK2AP2O75956 126 aa9.57□□□□□ -0.88
VCL-202ENST00000372755 LAGE3Q14657 143 aa9.57□□□□□ -0.88
VCL-202ENST00000372755 C3orf36Q3SXR2 165 aa9.57□□□□□ -0.88
VCL-202ENST00000372755 ZFC3H1O60293 1989 aaKnown RBP9.57□□□□□ -0.88
VCL-202ENST00000372755 EVI2AP22794 236 aa9.57□□□□□ -0.88
VCL-202ENST00000372755 CD24P25063 80 aa9.56□□□□□ -0.88
VCL-202ENST00000372755 ERVK11-1P61568 191 aa9.56□□□□□ -0.88
VCL-202ENST00000372755 IFI27L1Q96BM0 104 aa9.56□□□□□ -0.88
VCL-202ENST00000372755 FNDC4Q9H6D8 234 aaPredicted RBP9.56□□□□□ -0.88
VCL-202ENST00000372755 WDR83OSQ9Y284 106 aa9.56□□□□□ -0.88
VCL-202ENST00000372755 NINQ8N4C6 2090 aa9.56□□□□□ -0.88
VCL-202ENST00000372755 TRAV40A0A0B4J280 105 aa9.56□□□□□ -0.88
VCL-202ENST00000372755 PRR32B1ATL7 298 aa9.56□□□□□ -0.88
VCL-202ENST00000372755 ID3Q02535 119 aa9.56□□□□□ -0.88
VCL-202ENST00000372755 HSD52Q0P140 79 aa9.56□□□□□ -0.88
VCL-202ENST00000372755 JPT2Q9H910 190 aa9.56□□□□□ -0.88
VCL-202ENST00000372755 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.56□□□□□ -0.88
VCL-202ENST00000372755 IGHV1-46P01743 117 aa9.56□□□□□ -0.88
VCL-202ENST00000372755 PPIFP30405 207 aaKnown RBP9.56□□□□□ -0.88
VCL-202ENST00000372755 ERG28Q9UKR5 140 aa9.56□□□□□ -0.88
VCL-202ENST00000372755 SIPA1L3O60292 1781 aaPredicted RBP9.56□□□□□ -0.88
VCL-202ENST00000372755 NUP214P35658 2090 aaPredicted RBP9.56□□□□□ -0.88
VCL-202ENST00000372755 NAPSAO96009 420 aa9.56□□□□□ -0.88
VCL-202ENST00000372755 OCC1Q8TAD7 63 aa9.56□□□□□ -0.88
VCL-202ENST00000372755 ADAMTSL1Q8N6G6 1762 aa9.56□□□□□ -0.88
VCL-202ENST00000372755 A0A087WX48 190 aa9.56□□□□□ -0.88
VCL-202ENST00000372755 F8VVB4 439 aa9.56□□□□□ -0.88
VCL-202ENST00000372755 F8VWA3 439 aa9.56□□□□□ -0.88
VCL-202ENST00000372755 NR2C2APQ86WQ0 139 aa9.56□□□□□ -0.88
VCL-202ENST00000372755 RCHY1Q96PM5 261 aa9.56□□□□□ -0.88
VCL-202ENST00000372755 MS4A6AQ9H2W1 248 aa9.56□□□□□ -0.88
VCL-202ENST00000372755 MBNL3Q9NUK0 354 aaKnown RBP9.56□□□□□ -0.88
VCL-202ENST00000372755 ARID1AO14497 2285 aa9.55□□□□□ -0.88
VCL-202ENST00000372755 CD55P08174 381 aa9.55□□□□□ -0.88
VCL-202ENST00000372755 PRB3Q04118 309 aaPredicted RBP9.55□□□□□ -0.88
VCL-202ENST00000372755 SLC25A28Q96A46 364 aa9.55□□□□□ -0.88
VCL-202ENST00000372755 NDUFAF3Q9BU61 184 aa9.55□□□□□ -0.88
VCL-202ENST00000372755 SAP30O75446 220 aa9.55□□□□□ -0.88
VCL-202ENST00000372755 OOSP1A8MZH6 123 aa9.55□□□□□ -0.88
VCL-202ENST00000372755 TOMM40O96008 361 aa9.55□□□□□ -0.88
VCL-202ENST00000372755 CFHR1Q03591 330 aa9.55□□□□□ -0.88
VCL-202ENST00000372755 TEX38Q6PEX7 206 aa9.55□□□□□ -0.88
VCL-202ENST00000372755 SFTA2Q6UW10 78 aa9.55□□□□□ -0.88
VCL-202ENST00000372755 MEGF9Q9H1U4 602 aa9.55□□□□□ -0.88
VCL-202ENST00000372755 IGKV1-9A0A0C4DH69 117 aa9.55□□□□□ -0.88
VCL-202ENST00000372755 SEC11AP67812 179 aa9.55□□□□□ -0.88
VCL-202ENST00000372755 SLC25A48Q6ZT89 311 aaKnown RBP9.55□□□□□ -0.88
VCL-202ENST00000372755 PLEKHB2Q96CS7 222 aa9.55□□□□□ -0.88
VCL-202ENST00000372755 ZNF479Q96JC4 524 aa9.55□□□□□ -0.88
VCL-202ENST00000372755 RNF5Q99942 180 aa9.55□□□□□ -0.88
VCL-202ENST00000372755 ANAPC13Q9BS18 74 aa9.55□□□□□ -0.88
VCL-202ENST00000372755 DEPPQ9NTK1 212 aa9.55□□□□□ -0.88
VCL-202ENST00000372755 STRCP1A6NGW2 1772 aa9.54□□□□□ -0.88
VCL-202ENST00000372755 TMEM8BA6NDV4 472 aa9.54□□□□□ -0.88
VCL-202ENST00000372755 CD300EQ496F6 205 aaPredicted RBP9.54□□□□□ -0.88
VCL-202ENST00000372755 SPRR3Q9UBC9 169 aa9.54□□□□□ -0.88
VCL-202ENST00000372755 IGHV2-26A0A0B4J1V2 119 aa9.54□□□□□ -0.88
VCL-202ENST00000372755 LYNX1G3V0Z9 82 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms