RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 H7BYZ3 331 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 DEGS1O15121 323 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 SOCS1O15524 211 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 TCTAP57738 103 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 TAS2R46P59540 309 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 PLP2Q04941 152 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 LOXL1Q08397 574 aaPredicted RBP3.05□□□□□ -1.92
MCF2-203ENST00000370576 GTF3C1Q12789 2109 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 PRDX4Q13162 271 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 RBM39Q14498 530 aaKnown RBP3.05□□□□□ -1.92
MCF2-203ENST00000370576 MIDNQ504T8 468 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 IL34Q6ZMJ4 242 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 ACP7Q6ZNF0 438 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 HSD17B13Q7Z5P4 300 aaPredicted RBP3.05□□□□□ -1.92
MCF2-203ENST00000370576 MKXQ8IYA7 352 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 ZNRF1Q8ND25 227 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 MRPL24Q96A35 216 aaKnown RBP3.05□□□□□ -1.92
MCF2-203ENST00000370576 PLEKHB2Q96CS7 222 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 PHYHIPLQ96FC7 376 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 ZNF414Q96IQ9 312 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 PLSCR3Q9NRY6 295 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 CKLFQ9UBR5 152 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 HRNRQ86YZ3 2850 aaPredicted RBP3.05□□□□□ -1.92
MCF2-203ENST00000370576 CACNA1HO95180 2353 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 SLC17A3O00476 420 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 RBFOX2O43251 390 aaKnown RBP eCLIP3.05□□□□□ -1.92
MCF2-203ENST00000370576 MPC2O95563 127 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 MOSP00540 346 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 PLA2G2AP14555 144 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 PRSS3P35030 304 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 RPS27P42677 84 aaKnown RBP3.05□□□□□ -1.92
MCF2-203ENST00000370576 H2BFSP57053 126 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 SEC61BP60468 96 aaKnown RBP3.05□□□□□ -1.92
MCF2-203ENST00000370576 TMEM69Q5SWH9 247 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 OR10K2Q6IF99 312 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 GLIPR1L1Q6UWM5 242 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 COMMD7Q86VX2 200 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 VN1R17PQ8TDU5 208 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 LSM10Q969L4 123 aaKnown RBP3.05□□□□□ -1.92
MCF2-203ENST00000370576 RNF126Q9BV68 326 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 ZNF436Q9C0F3 470 aaPredicted RBP3.05□□□□□ -1.92
MCF2-203ENST00000370576 C16orf95Q9H693 158 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 ANXA10Q9UJ72 324 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 U3KQ87 197 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 PMS2P5A8MQ11 134 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 FABP5P3A8MUU1 101 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 K7EPK0 472 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 CXCL2P19875 107 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 RAB5AP20339 215 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 S100GP29377 79 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 CRIP2P52943 208 aaPredicted RBP3.04□□□□□ -1.92
MCF2-203ENST00000370576 TAS2R30P59541 319 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 LTC4SQ16873 150 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 ZNF343Q6P1L6 599 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 FAM57BQ71RH2 274 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 FAM71E2Q8N5Q1 922 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 Q8N7P7 452 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 OR11H6Q8NGC7 330 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 TERB2Q8NHR7 220 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 KLF14Q8TD94 323 aaPredicted RBP3.04□□□□□ -1.92
MCF2-203ENST00000370576 SCGB3A2Q96PL1 93 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 AK3Q9UIJ7 227 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 FAM186AA6NE01 2351 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 ZFHX3Q15911 3703 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 TRAV39A0A0B4J263 110 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 A0A1B0GWB2 263 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 C17orf98A8MV24 154 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 DIRC3C9JPN6 131 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 CDS2O95674 445 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 HBZP02008 142 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 MPV17P39210 176 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 GPR6P46095 362 aaPredicted RBP3.04□□□□□ -1.92
MCF2-203ENST00000370576 ZNF788Q6ZQV5 615 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 FBXL14Q8N1E6 418 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 KCNRGQ8N5I3 272 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 PCNPQ8WW12 178 aaKnown RBP3.04□□□□□ -1.92
MCF2-203ENST00000370576 CYYR1Q96J86 154 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 C9orf85Q96MD7 179 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 CST11Q9H112 138 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 TMPRSS5Q9H3S3 457 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 COMMD3Q9UBI1 195 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 PIGBOS1A0A0B4J2F0 54 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 YPEL1O60688 119 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 MYCNOSP40205 109 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 ARG2P78540 354 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 C17orf58Q2M2W7 97 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 LGALSLQ3ZCW2 172 aaPredicted RBP3.04□□□□□ -1.92
MCF2-203ENST00000370576 LRRC37A5PQ49AS3 106 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 UNQ9165/PRO28630Q6UXU0 137 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 ZNF767PQ75MW2 155 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 TMEM190Q8WZ59 177 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 C11orf52Q96A22 123 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 YPEL2Q96QA6 119 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 VPS25Q9BRG1 176 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 CA10Q9NS85 328 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 ING4Q9UNL4 249 aa3.04□□□□□ -1.92
MCF2-203ENST00000370576 YTHDF2Q9Y5A9 579 aaKnown RBP3.04□□□□□ -1.92
MCF2-203ENST00000370576 VPS13CQ709C8 3753 aa3.03□□□□□ -1.92
MCF2-203ENST00000370576 TRAV30A0A087WSZ9 112 aa3.03□□□□□ -1.92
MCF2-203ENST00000370576 FABP7O15540 132 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms