RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 WNT10AQ9GZT5 417 aa11.13□□□□□ -0.63
HMGCS2-201ENST00000369406 GSX1Q9H4S2 264 aaPredicted RBP11.13□□□□□ -0.63
HMGCS2-201ENST00000369406 PXMP4Q9Y6I8 212 aa11.13□□□□□ -0.63
HMGCS2-201ENST00000369406 H3BUX3 64 aa11.12□□□□□ -0.63
HMGCS2-201ENST00000369406 TSPAN15O95858 294 aa11.12□□□□□ -0.63
HMGCS2-201ENST00000369406 H2AFB1P0C5Y9 115 aa11.12□□□□□ -0.63
HMGCS2-201ENST00000369406 TEPPQ6URK8 271 aa11.12□□□□□ -0.63
HMGCS2-201ENST00000369406 IL34Q6ZMJ4 242 aa11.12□□□□□ -0.63
HMGCS2-201ENST00000369406 STPG3Q8N7X2 389 aa11.12□□□□□ -0.63
HMGCS2-201ENST00000369406 C5orf56Q8N8D9 126 aa11.12□□□□□ -0.63
HMGCS2-201ENST00000369406 OR1P1Q8NH06 330 aa11.12□□□□□ -0.63
HMGCS2-201ENST00000369406 C12orf57Q99622 126 aa11.12□□□□□ -0.63
HMGCS2-201ENST00000369406 SCAF4O95104 1147 aaKnown RBP11.11□□□□□ -0.63
HMGCS2-201ENST00000369406 HLA-DRB1P01911 266 aa11.11□□□□□ -0.63
HMGCS2-201ENST00000369406 CRYGCP07315 174 aa11.11□□□□□ -0.63
HMGCS2-201ENST00000369406 OR10J1P30954 320 aa11.11□□□□□ -0.63
HMGCS2-201ENST00000369406 AKR1D1P51857 326 aa11.11□□□□□ -0.63
HMGCS2-201ENST00000369406 ATP5IP56385 69 aaPredicted RBP11.11□□□□□ -0.63
HMGCS2-201ENST00000369406 TMEM144Q7Z5S9 345 aa11.11□□□□□ -0.63
HMGCS2-201ENST00000369406 LFNGQ8NES3 379 aa11.11□□□□□ -0.63
HMGCS2-201ENST00000369406 RNASEH2CQ8TDP1 164 aaKnown RBP11.11□□□□□ -0.63
HMGCS2-201ENST00000369406 NPIPB3Q92617 1050 aa11.11□□□□□ -0.63
HMGCS2-201ENST00000369406 RARRES2Q99969 163 aa11.11□□□□□ -0.63
HMGCS2-201ENST00000369406 SLC45A2Q9UMX9 530 aa11.11□□□□□ -0.63
HMGCS2-201ENST00000369406 RAB19A4D1S5 217 aa11.11□□□□□ -0.63
HMGCS2-201ENST00000369406 FNDC10F2Z333 226 aa11.11□□□□□ -0.63
HMGCS2-201ENST00000369406 SMAD7O15105 426 aaKnown RBP11.11□□□□□ -0.63
HMGCS2-201ENST00000369406 PRR20EP86478 221 aa11.11□□□□□ -0.63
HMGCS2-201ENST00000369406 PRR20CP86479 221 aa11.11□□□□□ -0.63
HMGCS2-201ENST00000369406 PRR20DP86480 221 aa11.11□□□□□ -0.63
HMGCS2-201ENST00000369406 PRR20BP86481 221 aa11.11□□□□□ -0.63
HMGCS2-201ENST00000369406 PRR20AP86496 221 aa11.11□□□□□ -0.63
HMGCS2-201ENST00000369406 DEFB112Q30KQ8 113 aa11.11□□□□□ -0.63
HMGCS2-201ENST00000369406 SPATA31B1PQ5VZV4 182 aa11.11□□□□□ -0.63
HMGCS2-201ENST00000369406 OR10G4Q8NGN3 311 aa11.11□□□□□ -0.63
HMGCS2-201ENST00000369406 OR10G9Q8NGN4 311 aa11.11□□□□□ -0.63
HMGCS2-201ENST00000369406 OR10G7Q8NGN6 311 aa11.11□□□□□ -0.63
HMGCS2-201ENST00000369406 RBM14Q96PK6 669 aaKnown RBP11.11□□□□□ -0.63
HMGCS2-201ENST00000369406 S4R3C0 116 aa11.11□□□□□ -0.63
HMGCS2-201ENST00000369406 I3L2K1 104 aa11.1□□□□□ -0.63
HMGCS2-201ENST00000369406 MPDU1O75352 247 aa11.1□□□□□ -0.63
HMGCS2-201ENST00000369406 MT-CO2P00403 227 aa11.1□□□□□ -0.63
HMGCS2-201ENST00000369406 GPX4P36969 197 aaPredicted RBP11.1□□□□□ -0.63
HMGCS2-201ENST00000369406 RND2P52198 227 aa11.1□□□□□ -0.63
HMGCS2-201ENST00000369406 FLI1Q01543 452 aaPredicted RBP11.1□□□□□ -0.63
HMGCS2-201ENST00000369406 ZNF90Q03938 601 aa11.1□□□□□ -0.63
HMGCS2-201ENST00000369406 ZNF709Q8N972 641 aa11.1□□□□□ -0.63
HMGCS2-201ENST00000369406 TMPRSS5Q9H3S3 457 aa11.1□□□□□ -0.63
HMGCS2-201ENST00000369406 KRBOX1C9JBD0 128 aa11.1□□□□□ -0.63
HMGCS2-201ENST00000369406 ATP6V0E1O15342 81 aa11.1□□□□□ -0.63
HMGCS2-201ENST00000369406 CD5P06127 495 aa11.1□□□□□ -0.63
HMGCS2-201ENST00000369406 SUB1P53999 127 aaKnown RBP eCLIP11.1□□□□□ -0.63
HMGCS2-201ENST00000369406 ATRAIDQ6UW56 229 aa11.1□□□□□ -0.63
HMGCS2-201ENST00000369406 DPPA3Q6W0C5 159 aa11.1□□□□□ -0.63
HMGCS2-201ENST00000369406 Q6ZS46 218 aa11.1□□□□□ -0.63
HMGCS2-201ENST00000369406 CLRN3Q8NCR9 226 aa11.1□□□□□ -0.63
HMGCS2-201ENST00000369406 MBD3L1Q8WWY6 194 aa11.1□□□□□ -0.63
HMGCS2-201ENST00000369406 FANCD2OSQ96PS1 177 aa11.1□□□□□ -0.63
HMGCS2-201ENST00000369406 MTORP42345 2549 aa11.1□□□□□ -0.63
HMGCS2-201ENST00000369406 A6NDX4 124 aa11.09□□□□□ -0.63
HMGCS2-201ENST00000369406 J3QLI3 93 aa11.09□□□□□ -0.63
HMGCS2-201ENST00000369406 K7EIM0 57 aa11.09□□□□□ -0.63
HMGCS2-201ENST00000369406 S100A12P80511 92 aa11.09□□□□□ -0.63
HMGCS2-201ENST00000369406 OR5T1Q8NG75 326 aa11.09□□□□□ -0.63
HMGCS2-201ENST00000369406 CACNG8Q8WXS5 425 aa11.09□□□□□ -0.63
HMGCS2-201ENST00000369406 MAP1LC3B2A6NCE7 125 aa11.09□□□□□ -0.63
HMGCS2-201ENST00000369406 C17orf112F2Z3M2 114 aa11.09□□□□□ -0.63
HMGCS2-201ENST00000369406 G3V318 75 aa11.09□□□□□ -0.63
HMGCS2-201ENST00000369406 FBP1P09467 338 aa11.09□□□□□ -0.63
HMGCS2-201ENST00000369406 KRTAP1-1Q07627 177 aa11.09□□□□□ -0.63
HMGCS2-201ENST00000369406 IL17RELQ6ZVW7 336 aa11.09□□□□□ -0.63
HMGCS2-201ENST00000369406 GATAD1Q8WUU5 269 aa11.09□□□□□ -0.63
HMGCS2-201ENST00000369406 RAB24Q969Q5 203 aa11.09□□□□□ -0.63
HMGCS2-201ENST00000369406 SLC35E1Q96K37 410 aa11.09□□□□□ -0.63
HMGCS2-201ENST00000369406 ZNF48Q96MX3 618 aaPredicted RBP11.09□□□□□ -0.63
HMGCS2-201ENST00000369406 RASL11BQ9BPW5 248 aa11.09□□□□□ -0.63
HMGCS2-201ENST00000369406 MAP1LC3BQ9GZQ8 125 aa11.09□□□□□ -0.63
HMGCS2-201ENST00000369406 SLC39A9Q9NUM3 307 aa11.09□□□□□ -0.63
HMGCS2-201ENST00000369406 DNASE2O00115 360 aaPredicted RBP11.08□□□□□ -0.64
HMGCS2-201ENST00000369406 IGHV4-59P01825 116 aa11.08□□□□□ -0.64
HMGCS2-201ENST00000369406 GUK1Q16774 197 aa11.08□□□□□ -0.64
HMGCS2-201ENST00000369406 THAP8Q8NA92 274 aa11.08□□□□□ -0.64
HMGCS2-201ENST00000369406 NARS2Q96I59 477 aaKnown RBP11.08□□□□□ -0.64
HMGCS2-201ENST00000369406 SRSF8Q9BRL6 282 aaKnown RBP11.08□□□□□ -0.64
HMGCS2-201ENST00000369406 SEPSECSQ9HD40 501 aaKnown RBP11.08□□□□□ -0.64
HMGCS2-201ENST00000369406 C1RLQ9NZP8 487 aa11.08□□□□□ -0.64
HMGCS2-201ENST00000369406 LINC00527Q9UJ94 153 aa11.08□□□□□ -0.64
HMGCS2-201ENST00000369406 TRAV1-1A0A0B4J248 108 aa11.08□□□□□ -0.64
HMGCS2-201ENST00000369406 RPL29P47914 159 aaKnown RBP11.08□□□□□ -0.64
HMGCS2-201ENST00000369406 HAGHQ16775 308 aa11.08□□□□□ -0.64
HMGCS2-201ENST00000369406 ECSCRQ19T08 205 aa11.08□□□□□ -0.64
HMGCS2-201ENST00000369406 FAM209BQ5JX69 171 aa11.08□□□□□ -0.64
HMGCS2-201ENST00000369406 TREM1Q9NP99 234 aa11.08□□□□□ -0.64
HMGCS2-201ENST00000369406 MOB4Q9Y3A3 225 aa11.08□□□□□ -0.64
HMGCS2-201ENST00000369406 IGLV11-55A0A075B6I3 123 aa11.07□□□□□ -0.64
HMGCS2-201ENST00000369406 NPIPB5A8MRT5 1133 aa11.07□□□□□ -0.64
HMGCS2-201ENST00000369406 SEC14L6B5MCN3 397 aa11.07□□□□□ -0.64
HMGCS2-201ENST00000369406 FOSL1P15407 271 aa11.07□□□□□ -0.64
HMGCS2-201ENST00000369406 MORN5Q5VZ52 161 aa11.07□□□□□ -0.64
HMGCS2-201ENST00000369406 TTC9CQ8N5M4 171 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms