RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 CACNG8Q8WXS5 425 aa14.95□□□□□ -0.02
SNX27-203ENST00000368843 NYNRINQ9P2P1 1898 aaKnown RBP14.95□□□□□ -0.02
SNX27-203ENST00000368843 TET1Q8NFU7 2136 aa14.95□□□□□ -0.02
SNX27-203ENST00000368843 ST20Q9HBF5 79 aa14.95□□□□□ -0.02
SNX27-203ENST00000368843 ERVH48-1M5A8F1 160 aa14.94□□□□□ -0.02
SNX27-203ENST00000368843 TMEM50AO95807 157 aa14.94□□□□□ -0.02
SNX27-203ENST00000368843 LYZL4Q96KX0 146 aa14.94□□□□□ -0.02
SNX27-203ENST00000368843 C1QTNF9BB2RNN3 333 aa14.94□□□□□ -0.02
SNX27-203ENST00000368843 DDTP30046 118 aa14.94□□□□□ -0.02
SNX27-203ENST00000368843 ERVK11-1P61568 191 aa14.94□□□□□ -0.02
SNX27-203ENST00000368843 PAX8Q06710 450 aa14.94□□□□□ -0.02
SNX27-203ENST00000368843 SSBP4Q9BWG4 385 aaPredicted RBP14.94□□□□□ -0.02
SNX27-203ENST00000368843 ZNF688P0C7X2 276 aa14.94□□□□□ -0.02
SNX27-203ENST00000368843 SRSF7Q16629 238 aaKnown RBP eCLIP14.94□□□□□ -0.02
SNX27-203ENST00000368843 RNF125Q96EQ8 232 aa14.94□□□□□ -0.02
SNX27-203ENST00000368843 IGHV3-73A0A0B4J1V6 119 aa14.94□□□□□ -0.02
SNX27-203ENST00000368843 RIPPLY3P57055 190 aa14.94□□□□□ -0.02
SNX27-203ENST00000368843 FAM166AQ6J272 317 aa14.94□□□□□ -0.02
SNX27-203ENST00000368843 CIARTQ8N365 385 aaPredicted RBP14.94□□□□□ -0.02
SNX27-203ENST00000368843 TPRP12270 2363 aaKnown RBP14.94□□□□□ -0.02
SNX27-203ENST00000368843 LOC102723996A0A087X1L8 192 aa14.94□□□□□ -0.02
SNX27-203ENST00000368843 ZNF672Q499Z4 452 aaPredicted RBP14.94□□□□□ -0.02
SNX27-203ENST00000368843 PSMG4Q5JS54 123 aa14.94□□□□□ -0.02
SNX27-203ENST00000368843 C15orf61A6NNL5 157 aa14.93□□□□□ -0.02
SNX27-203ENST00000368843 ARHGEF17Q96PE2 2063 aaPredicted RBP14.93□□□□□ -0.02
SNX27-203ENST00000368843 FAM169BQ8N8A8 192 aa14.93□□□□□ -0.02
SNX27-203ENST00000368843 IGLV3-12A0A075B6K2 115 aa14.93□□□□□ -0.02
SNX27-203ENST00000368843 DTX2Q86UW9 622 aa14.93□□□□□ -0.02
SNX27-203ENST00000368843 LCTP09848 1927 aa14.93□□□□□ -0.02
SNX27-203ENST00000368843 SIGLEC15Q6ZMC9 328 aa14.93□□□□□ -0.02
SNX27-203ENST00000368843 CFHR1Q03591 330 aa14.93□□□□□ -0.02
SNX27-203ENST00000368843 SLC50A1Q9BRV3 221 aa14.93□□□□□ -0.02
SNX27-203ENST00000368843 UCP1P25874 307 aa14.93□□□□□ -0.02
SNX27-203ENST00000368843 PVRIGQ6DKI7 326 aa14.93□□□□□ -0.02
SNX27-203ENST00000368843 RPL35AP18077 110 aaKnown RBP14.92□□□□□ -0.02
SNX27-203ENST00000368843 SLC25A20O43772 301 aa14.92□□□□□ -0.02
SNX27-203ENST00000368843 VCX2Q9H322 139 aa14.92□□□□□ -0.02
SNX27-203ENST00000368843 TRAV41A0A0B4J266 112 aa14.92□□□□□ -0.02
SNX27-203ENST00000368843 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.92□□□□□ -0.02
SNX27-203ENST00000368843 FABP5P3A8MUU1 101 aa14.91□□□□□ -0.02
SNX27-203ENST00000368843 VENTXO95231 258 aa14.91□□□□□ -0.02
SNX27-203ENST00000368843 DPRXA6NFQ7 191 aa14.91□□□□□ -0.02
SNX27-203ENST00000368843 ORMDL3Q8N138 153 aa14.91□□□□□ -0.02
SNX27-203ENST00000368843 OR9G9P0C7N8 305 aa14.91□□□□□ -0.02
SNX27-203ENST00000368843 IFI27P40305 119 aaPredicted RBP14.91□□□□□ -0.02
SNX27-203ENST00000368843 LINC00114Q6XXX2 140 aa14.91□□□□□ -0.02
SNX27-203ENST00000368843 MESP1Q9BRJ9 268 aa14.91□□□□□ -0.02
SNX27-203ENST00000368843 TRAV21A0A0B4J279 112 aa14.91□□□□□ -0.02
SNX27-203ENST00000368843 HIGD1CA8MV81 97 aa14.91□□□□□ -0.02
SNX27-203ENST00000368843 FXYD7P58549 80 aa14.91□□□□□ -0.02
SNX27-203ENST00000368843 RNASE7Q9H1E1 156 aaKnown RBP14.91□□□□□ -0.02
SNX27-203ENST00000368843 Q5PR19 223 aa14.91□□□□□ -0.02
SNX27-203ENST00000368843 ASCL2Q99929 193 aa14.91□□□□□ -0.02
SNX27-203ENST00000368843 DOCK4Q8N1I0 1966 aa14.91□□□□□ -0.02
SNX27-203ENST00000368843 MLNRO43193 412 aa14.9□□□□□ -0.02
SNX27-203ENST00000368843 EFNA4P52798 201 aa14.9□□□□□ -0.02
SNX27-203ENST00000368843 NTN3O00634 580 aaPredicted RBP14.9□□□□□ -0.02
SNX27-203ENST00000368843 CA1P00915 261 aaPredicted RBP14.9□□□□□ -0.02
SNX27-203ENST00000368843 OR5A1Q8NGJ0 315 aa14.9□□□□□ -0.02
SNX27-203ENST00000368843 FGFBP3Q8TAT2 258 aa14.9□□□□□ -0.02
SNX27-203ENST00000368843 NXT2Q9NPJ8 142 aaKnown RBP14.9□□□□□ -0.02
SNX27-203ENST00000368843 TRBV6-7A0A0A0MS04 114 aa14.89□□□□□ -0.03
SNX27-203ENST00000368843 ADARB2-AS1A8MUL3 147 aa14.89□□□□□ -0.03
SNX27-203ENST00000368843 BRD3OSQ6XYD6 125 aa14.89□□□□□ -0.03
SNX27-203ENST00000368843 CHCHD5Q9BSY4 110 aa14.89□□□□□ -0.03
SNX27-203ENST00000368843 TRGV11A0A075B6L2 103 aa14.89□□□□□ -0.03
SNX27-203ENST00000368843 IGHV2-26A0A0B4J1V2 119 aa14.89□□□□□ -0.03
SNX27-203ENST00000368843 SBF1O95248 1867 aa14.89□□□□□ -0.03
SNX27-203ENST00000368843 CD55P08174 381 aa14.89□□□□□ -0.03
SNX27-203ENST00000368843 IGKV1D-13A0A0B4J2D9 117 aa14.89□□□□□ -0.03
SNX27-203ENST00000368843 IGKV1-13P0DP09 117 aa14.89□□□□□ -0.03
SNX27-203ENST00000368843 SDHCQ99643 169 aaPredicted RBP14.89□□□□□ -0.03
SNX27-203ENST00000368843 A0A1B0GTI1 187 aa14.89□□□□□ -0.03
SNX27-203ENST00000368843 C18orf12Q96KH6 178 aa14.89□□□□□ -0.03
SNX27-203ENST00000368843 IZUMO1RA6ND01 250 aa14.89□□□□□ -0.03
SNX27-203ENST00000368843 ASCL4Q6XD76 172 aa14.89□□□□□ -0.03
SNX27-203ENST00000368843 FAM89BQ8N5H3 189 aa14.89□□□□□ -0.03
SNX27-203ENST00000368843 A0A1B0GWB2 263 aa14.89□□□□□ -0.03
SNX27-203ENST00000368843 CD8AP01732 235 aa14.89□□□□□ -0.03
SNX27-203ENST00000368843 LINC00614P0C842 121 aa14.89□□□□□ -0.03
SNX27-203ENST00000368843 PYYP10082 97 aa14.88□□□□□ -0.03
SNX27-203ENST00000368843 A0A0G2JNJ9 132 aa14.88□□□□□ -0.03
SNX27-203ENST00000368843 LILRA1O75019 489 aa14.88□□□□□ -0.03
SNX27-203ENST00000368843 Q9UFV3 132 aa14.88□□□□□ -0.03
SNX27-203ENST00000368843 TIMP3P35625 211 aa14.88□□□□□ -0.03
SNX27-203ENST00000368843 Q6AWC8 147 aa14.88□□□□□ -0.03
SNX27-203ENST00000368843 OR10W1Q8NGF6 305 aa14.88□□□□□ -0.03
SNX27-203ENST00000368843 CD28P10747 220 aa14.88□□□□□ -0.03
SNX27-203ENST00000368843 ZNF525Q8N782 197 aa14.88□□□□□ -0.03
SNX27-203ENST00000368843 PSCAO43653 123 aa14.87□□□□□ -0.03
SNX27-203ENST00000368843 TMEM200BQ69YZ2 307 aa14.87□□□□□ -0.03
SNX27-203ENST00000368843 C20orf204Q6ZNR8 217 aa14.87□□□□□ -0.03
SNX27-203ENST00000368843 TMEM144Q7Z5S9 345 aa14.87□□□□□ -0.03
SNX27-203ENST00000368843 A0A1B0GW15 77 aa14.87□□□□□ -0.03
SNX27-203ENST00000368843 SRSF6Q13247 344 aaKnown RBP14.87□□□□□ -0.03
SNX27-203ENST00000368843 A0A0G2JMZ2 1700 aa14.87□□□□□ -0.03
SNX27-203ENST00000368843 LRRC37A2A6NM11 1700 aa14.87□□□□□ -0.03
SNX27-203ENST00000368843 GTF3AQ92664 365 aaKnown RBP14.87□□□□□ -0.03
SNX27-203ENST00000368843 IGFBP3P17936 291 aaPredicted RBP14.86□□□□□ -0.03
SNX27-203ENST00000368843 NHLRC3Q5JS37 347 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms