RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 PHLDA1Q8WV24 401 aaPredicted RBP15.13■□□□□ 0.01
SNX27-202ENST00000368841 PRSS22Q9GZN4 317 aa15.13■□□□□ 0.01
SNX27-202ENST00000368841 LINC00158P58513 81 aa15.13■□□□□ 0.01
SNX27-202ENST00000368841 C5orf24Q7Z6I8 188 aa15.13■□□□□ 0.01
SNX27-202ENST00000368841 LINC00312Q9Y6C7 94 aa15.13■□□□□ 0.01
SNX27-202ENST00000368841 PAX1P15863 534 aa15.13■□□□□ 0.01
SNX27-202ENST00000368841 CEACAM1P13688 526 aa15.13■□□□□ 0.01
SNX27-202ENST00000368841 IGLV3-21P80748 117 aaPredicted RBP15.13■□□□□ 0.01
SNX27-202ENST00000368841 ZNF474Q6S9Z5 364 aaPredicted RBP15.13■□□□□ 0.01
SNX27-202ENST00000368841 SEPSECSQ9HD40 501 aaKnown RBP15.13■□□□□ 0.01
SNX27-202ENST00000368841 PQLC2LA1A4F0 135 aa15.12■□□□□ 0.01
SNX27-202ENST00000368841 SELLP14151 372 aa15.12■□□□□ 0.01
SNX27-202ENST00000368841 IFI27P40305 119 aaPredicted RBP15.12■□□□□ 0.01
SNX27-202ENST00000368841 SRSF6Q13247 344 aaKnown RBP15.12■□□□□ 0.01
SNX27-202ENST00000368841 SERF1AO75920 110 aa15.12■□□□□ 0.01
SNX27-202ENST00000368841 ZNF688P0C7X2 276 aa15.12■□□□□ 0.01
SNX27-202ENST00000368841 VSIRQ9H7M9 311 aa15.12■□□□□ 0.01
SNX27-202ENST00000368841 GNLYP22749 145 aa15.12■□□□□ 0.01
SNX27-202ENST00000368841 FOXL1Q12952 345 aa15.12■□□□□ 0.01
SNX27-202ENST00000368841 LAIR2Q6ISS4 152 aa15.12■□□□□ 0.01
SNX27-202ENST00000368841 FBLIM1Q8WUP2 373 aa15.12■□□□□ 0.01
SNX27-202ENST00000368841 CHTOPQ9Y3Y2 248 aaKnown RBP15.12■□□□□ 0.01
SNX27-202ENST00000368841 HBDP02042 147 aa15.12■□□□□ 0.01
SNX27-202ENST00000368841 SRP19P09132 144 aaKnown RBP15.12■□□□□ 0.01
SNX27-202ENST00000368841 TM2D1Q9BX74 207 aa15.12■□□□□ 0.01
SNX27-202ENST00000368841 IMMP1LQ96LU5 166 aa15.12■□□□□ 0.01
SNX27-202ENST00000368841 NCR2O95944 276 aa15.11■□□□□ 0.01
SNX27-202ENST00000368841 MORN2Q502X0 79 aa15.11■□□□□ 0.01
SNX27-202ENST00000368841 SIGLEC15Q6ZMC9 328 aa15.11■□□□□ 0.01
SNX27-202ENST00000368841 SPACA3Q8IXA5 215 aa15.11■□□□□ 0.01
SNX27-202ENST00000368841 RNASE6Q93091 150 aaKnown RBP15.11■□□□□ 0.01
SNX27-202ENST00000368841 FOXD3Q9UJU5 478 aaPredicted RBP15.11■□□□□ 0.01
SNX27-202ENST00000368841 CD8AP01732 235 aa15.11■□□□□ 0.01
SNX27-202ENST00000368841 RNF125Q96EQ8 232 aa15.11■□□□□ 0.01
SNX27-202ENST00000368841 LTBP4Q8N2S1 1624 aa15.11■□□□□ 0.01
SNX27-202ENST00000368841 ZNF525Q8N782 197 aa15.11■□□□□ 0.01
SNX27-202ENST00000368841 GATD1Q8NB37 220 aa15.11■□□□□ 0.01
SNX27-202ENST00000368841 OTORQ9NRC9 128 aa15.11■□□□□ 0.01
SNX27-202ENST00000368841 UPK2O00526 184 aa15.11■□□□□ 0.01
SNX27-202ENST00000368841 MAPK1IP1LQ8NDC0 245 aa15.11■□□□□ 0.01
SNX27-202ENST00000368841 C18orf12Q96KH6 178 aa15.11■□□□□ 0.01
SNX27-202ENST00000368841 PSMG3Q9BT73 122 aaPredicted RBP15.11■□□□□ 0.01
SNX27-202ENST00000368841 NPIPB13A6NJU9 1138 aa15.11■□□□□ 0.01
SNX27-202ENST00000368841 NPIPB5A8MRT5 1133 aa15.11■□□□□ 0.01
SNX27-202ENST00000368841 UBE2E2Q96LR5 201 aa15.11■□□□□ 0.01
SNX27-202ENST00000368841 DERL1Q9BUN8 251 aa15.11■□□□□ 0.01
SNX27-202ENST00000368841 HEATR5BQ9P2D3 2071 aa15.1■□□□□ 0.01
SNX27-202ENST00000368841 TMEM133Q9H2Q1 129 aa15.1■□□□□ 0.01
SNX27-202ENST00000368841 SBF2Q86WG5 1849 aa15.1■□□□□ 0.01
SNX27-202ENST00000368841 PCP4P48539 62 aa15.1■□□□□ 0.01
SNX27-202ENST00000368841 C10orf55Q5SWW7 151 aa15.1■□□□□ 0.01
SNX27-202ENST00000368841 NAA38Q9BRA0 125 aaKnown RBP15.1■□□□□ 0.01
SNX27-202ENST00000368841 CD300EQ496F6 205 aaPredicted RBP15.1■□□□□ 0.01
SNX27-202ENST00000368841 C1orf122Q6ZSJ8 110 aa15.1■□□□□ 0.01
SNX27-202ENST00000368841 Q71RC1 249 aaPredicted RBP15.1■□□□□ 0.01
SNX27-202ENST00000368841 MYOD1P15172 320 aa15.09■□□□□ 0.01
SNX27-202ENST00000368841 LINC00518Q8N0U6 118 aa15.09■□□□□ 0.01
SNX27-202ENST00000368841 EXOC3-AS1Q8N2X6 119 aa15.09■□□□□ 0.01
SNX27-202ENST00000368841 LY6HO94772 140 aa15.09■□□□□ 0.01
SNX27-202ENST00000368841 S100A7L2Q5SY68 101 aa15.09■□□□□ 0.01
SNX27-202ENST00000368841 PSCAO43653 123 aa15.09■□□□□ 0.01
SNX27-202ENST00000368841 RPL23P62829 140 aaKnown RBP15.09■□□□□ 0.01
SNX27-202ENST00000368841 ACTL10Q5JWF8 245 aa15.09■□□□□ 0.01
SNX27-202ENST00000368841 SPATA31B1PQ5VZV4 182 aa15.09■□□□□ 0.01
SNX27-202ENST00000368841 BRWD3Q6RI45 1802 aa15.08■□□□□ 0.01
SNX27-202ENST00000368841 ATRAIDQ6UW56 229 aa15.08■□□□□ 0.01
SNX27-202ENST00000368841 SLC25A28Q96A46 364 aa15.08■□□□□ 0
SNX27-202ENST00000368841 MEGF9Q9H1U4 602 aa15.08■□□□□ 0
SNX27-202ENST00000368841 SLC25A15Q9Y619 301 aa15.08■□□□□ 0
SNX27-202ENST00000368841 C15orf61A6NNL5 157 aa15.08■□□□□ 0
SNX27-202ENST00000368841 CA7P43166 264 aa15.08■□□□□ 0
SNX27-202ENST00000368841 PAX8Q06710 450 aa15.08■□□□□ 0
SNX27-202ENST00000368841 SRSF4Q08170 494 aaKnown RBP15.08■□□□□ 0
SNX27-202ENST00000368841 CST9LQ9H4G1 147 aa15.08■□□□□ 0
SNX27-202ENST00000368841 A0A0A6YYD4 124 aa15.08■□□□□ 0
SNX27-202ENST00000368841 FOXG1P55316 489 aaPredicted RBP15.08■□□□□ 0
SNX27-202ENST00000368841 DMRT1Q9Y5R6 373 aa15.08■□□□□ 0
SNX27-202ENST00000368841 PTPRZ1P23471 2315 aaPredicted RBP15.08■□□□□ 0
SNX27-202ENST00000368841 TMEM30BQ3MIR4 351 aa15.08■□□□□ 0
SNX27-202ENST00000368841 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.08■□□□□ 0
SNX27-202ENST00000368841 ZNF497Q6ZNH5 498 aa15.07■□□□□ 0
SNX27-202ENST00000368841 FABP5P3A8MUU1 101 aa15.07■□□□□ 0
SNX27-202ENST00000368841 MBD3L1Q8WWY6 194 aa15.07■□□□□ 0
SNX27-202ENST00000368841 TNS1Q9HBL0 1735 aaKnown RBP15.07■□□□□ 0
SNX27-202ENST00000368841 A6NNC1 897 aa15.07■□□□□ 0
SNX27-202ENST00000368841 ZNF329Q86UD4 541 aa15.07■□□□□ 0
SNX27-202ENST00000368841 WBP1Q96G27 269 aa15.07■□□□□ 0
SNX27-202ENST00000368841 RNF182Q8N6D2 247 aa15.07■□□□□ 0
SNX27-202ENST00000368841 RPUSD1Q9UJJ7 312 aaKnown RBP15.07■□□□□ 0
SNX27-202ENST00000368841 ARHGEF17Q96PE2 2063 aaPredicted RBP15.07■□□□□ 0
SNX27-202ENST00000368841 CIARTQ8N365 385 aaPredicted RBP15.07■□□□□ 0
SNX27-202ENST00000368841 NEUROG1Q92886 237 aa15.07■□□□□ 0
SNX27-202ENST00000368841 IGHV1-46P01743 117 aa15.06■□□□□ 0
SNX27-202ENST00000368841 VENTXO95231 258 aa15.06■□□□□ 0
SNX27-202ENST00000368841 WFDC1Q9HC57 220 aa15.06■□□□□ 0
SNX27-202ENST00000368841 EPDR1Q9UM22 224 aa15.06■□□□□ 0
SNX27-202ENST00000368841 PSG8Q9UQ74 426 aa15.06■□□□□ 0
SNX27-202ENST00000368841 RCHY1Q96PM5 261 aa15.06■□□□□ 0
SNX27-202ENST00000368841 ARID2Q68CP9 1835 aa15.06■□□□□ 0
SNX27-202ENST00000368841 CFHR3Q02985 330 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms