RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 NPBWR1P48145 328 aa7.55□□□□□ -1.2
CLRN3-201ENST00000368671 RNASE12Q5GAN4 147 aaKnown RBP7.55□□□□□ -1.2
CLRN3-201ENST00000368671 STHQ8IWL8 128 aa7.55□□□□□ -1.2
CLRN3-201ENST00000368671 YIPF6Q96EC8 236 aa7.55□□□□□ -1.2
CLRN3-201ENST00000368671 A0A1B0GU03 582 aa7.54□□□□□ -1.2
CLRN3-201ENST00000368671 SMIM31A0A1B0GVY4 71 aa7.54□□□□□ -1.2
CLRN3-201ENST00000368671 IGLL5B9A064 214 aa7.54□□□□□ -1.2
CLRN3-201ENST00000368671 M0QYG6 137 aa7.54□□□□□ -1.2
CLRN3-201ENST00000368671 TMEM50AO95807 157 aa7.54□□□□□ -1.2
CLRN3-201ENST00000368671 IFNA17P01571 189 aa7.54□□□□□ -1.2
CLRN3-201ENST00000368671 CD5P06127 495 aa7.54□□□□□ -1.2
CLRN3-201ENST00000368671 PI3P19957 117 aa7.54□□□□□ -1.2
CLRN3-201ENST00000368671 HOXA1P49639 335 aaPredicted RBP7.54□□□□□ -1.2
CLRN3-201ENST00000368671 AKR1C2P52895 323 aa7.54□□□□□ -1.2
CLRN3-201ENST00000368671 UCP3P55916 312 aa7.54□□□□□ -1.2
CLRN3-201ENST00000368671 KRTAP19-1Q8IUB9 90 aa7.54□□□□□ -1.2
CLRN3-201ENST00000368671 STXBP6Q8NFX7 210 aa7.54□□□□□ -1.2
CLRN3-201ENST00000368671 PDCD10Q9BUL8 212 aa7.54□□□□□ -1.2
CLRN3-201ENST00000368671 TMEM231Q9H6L2 316 aa7.54□□□□□ -1.2
CLRN3-201ENST00000368671 SCPEP1Q9HB40 452 aa7.54□□□□□ -1.2
CLRN3-201ENST00000368671 TRAV2A0A0B4J234 112 aa7.53□□□□□ -1.2
CLRN3-201ENST00000368671 CORTO00230 105 aa7.53□□□□□ -1.2
CLRN3-201ENST00000368671 IGKV1-5P01602 117 aa7.53□□□□□ -1.2
CLRN3-201ENST00000368671 NPPCP23582 126 aa7.53□□□□□ -1.2
CLRN3-201ENST00000368671 Q8NAQ8 132 aa7.53□□□□□ -1.2
CLRN3-201ENST00000368671 TP53RKQ96S44 253 aa7.53□□□□□ -1.2
CLRN3-201ENST00000368671 MRPL36Q9P0J6 103 aaKnown RBP7.53□□□□□ -1.2
CLRN3-201ENST00000368671 APLNQ9ULZ1 77 aa7.53□□□□□ -1.2
CLRN3-201ENST00000368671 A0A0B4J293 547 aa7.52□□□□□ -1.21
CLRN3-201ENST00000368671 IGHV4-28A0A0C4DH34 117 aa7.52□□□□□ -1.21
CLRN3-201ENST00000368671 A0A1W2PS18 150 aa7.52□□□□□ -1.21
CLRN3-201ENST00000368671 KNCNA6PVL3 124 aa7.52□□□□□ -1.21
CLRN3-201ENST00000368671 C11orf94C9JXX5 98 aa7.52□□□□□ -1.21
CLRN3-201ENST00000368671 K7EQG2 157 aa7.52□□□□□ -1.21
CLRN3-201ENST00000368671 HPGDSO60760 199 aa7.52□□□□□ -1.21
CLRN3-201ENST00000368671 APOA1P02647 267 aa7.52□□□□□ -1.21
CLRN3-201ENST00000368671 ZNF688P0C7X2 276 aa7.52□□□□□ -1.21
CLRN3-201ENST00000368671 RNASE2P10153 161 aaKnown RBP7.52□□□□□ -1.21
CLRN3-201ENST00000368671 ELK1P19419 428 aa7.52□□□□□ -1.21
CLRN3-201ENST00000368671 C4BPBP20851 252 aa7.52□□□□□ -1.21
CLRN3-201ENST00000368671 OPRK1P41145 380 aa7.52□□□□□ -1.21
CLRN3-201ENST00000368671 ETV6P41212 452 aa7.52□□□□□ -1.21
CLRN3-201ENST00000368671 PPP5CP53041 499 aa7.52□□□□□ -1.21
CLRN3-201ENST00000368671 SUB1P53999 127 aaKnown RBP eCLIP7.52□□□□□ -1.21
CLRN3-201ENST00000368671 PIGPP57054 158 aa7.52□□□□□ -1.21
CLRN3-201ENST00000368671 TCTAP57738 103 aa7.52□□□□□ -1.21
CLRN3-201ENST00000368671 RND3P61587 244 aa7.52□□□□□ -1.21
CLRN3-201ENST00000368671 NCS1P62166 190 aa7.52□□□□□ -1.21
CLRN3-201ENST00000368671 MLANAQ16655 118 aa7.52□□□□□ -1.21
CLRN3-201ENST00000368671 TRIM16LQ309B1 348 aa7.52□□□□□ -1.21
CLRN3-201ENST00000368671 TRPT1Q86TN4 253 aaKnown RBP7.52□□□□□ -1.21
CLRN3-201ENST00000368671 RNASE11Q8TAA1 199 aaKnown RBP7.52□□□□□ -1.21
CLRN3-201ENST00000368671 TMEM230Q96A57 120 aa7.52□□□□□ -1.21
CLRN3-201ENST00000368671 METTL26Q96S19 204 aa7.52□□□□□ -1.21
CLRN3-201ENST00000368671 VCX3AQ9NNX9 186 aa7.52□□□□□ -1.21
CLRN3-201ENST00000368671 ENY2Q9NPA8 101 aa7.52□□□□□ -1.21
CLRN3-201ENST00000368671 FRAS1Q86XX4 4008 aa7.51□□□□□ -1.21
CLRN3-201ENST00000368671 A0A087WXM4 84 aa7.51□□□□□ -1.21
CLRN3-201ENST00000368671 C3orf85A0A1B0GTC6 90 aa7.51□□□□□ -1.21
CLRN3-201ENST00000368671 FAM25AB3EWG3 89 aa7.51□□□□□ -1.21
CLRN3-201ENST00000368671 FAM25CB3EWG5 89 aa7.51□□□□□ -1.21
CLRN3-201ENST00000368671 FAM25GB3EWG6 89 aa7.51□□□□□ -1.21
CLRN3-201ENST00000368671 INS-IGF2F8WCM5 200 aa7.51□□□□□ -1.21
CLRN3-201ENST00000368671 CLN5O75503 358 aa7.51□□□□□ -1.21
CLRN3-201ENST00000368671 SCGB2A1O75556 95 aa7.51□□□□□ -1.21
CLRN3-201ENST00000368671 ATG12O94817 140 aa7.51□□□□□ -1.21
CLRN3-201ENST00000368671 P0C879 139 aa7.51□□□□□ -1.21
CLRN3-201ENST00000368671 RBMY1A1P0DJD3 496 aaKnown RBP7.51□□□□□ -1.21
CLRN3-201ENST00000368671 RBMY1CP0DJD4 496 aa7.51□□□□□ -1.21
CLRN3-201ENST00000368671 P2RY1P47900 373 aa7.51□□□□□ -1.21
CLRN3-201ENST00000368671 VBP1P61758 197 aa7.51□□□□□ -1.21
CLRN3-201ENST00000368671 RBMY1FQ15415 496 aaKnown RBP7.51□□□□□ -1.21
CLRN3-201ENST00000368671 SP6Q3SY56 376 aa7.51□□□□□ -1.21
CLRN3-201ENST00000368671 TIGITQ495A1 244 aa7.51□□□□□ -1.21
CLRN3-201ENST00000368671 RNASE10Q5GAN6 216 aaKnown RBP7.51□□□□□ -1.21
CLRN3-201ENST00000368671 MORN3Q6PF18 240 aaPredicted RBP7.51□□□□□ -1.21
CLRN3-201ENST00000368671 ZNF486Q96H40 463 aaPredicted RBP7.51□□□□□ -1.21
CLRN3-201ENST00000368671 NARS2Q96I59 477 aaKnown RBP7.51□□□□□ -1.21
CLRN3-201ENST00000368671 FNDC4Q9H6D8 234 aaPredicted RBP7.51□□□□□ -1.21
CLRN3-201ENST00000368671 CLEC5AQ9NY25 188 aa7.51□□□□□ -1.21
CLRN3-201ENST00000368671 KMT2AQ03164 3969 aa7.51□□□□□ -1.21
CLRN3-201ENST00000368671 A0A0G2JRQ6 117 aa7.5□□□□□ -1.21
CLRN3-201ENST00000368671 CD3DP04234 171 aa7.5□□□□□ -1.21
CLRN3-201ENST00000368671 GIG44P09565 113 aaPredicted RBP7.5□□□□□ -1.21
CLRN3-201ENST00000368671 SPP1P10451 314 aa7.5□□□□□ -1.21
CLRN3-201ENST00000368671 MIFP14174 115 aa7.5□□□□□ -1.21
CLRN3-201ENST00000368671 CRYBB3P26998 211 aa7.5□□□□□ -1.21
CLRN3-201ENST00000368671 HLA-DMBP28068 263 aa7.5□□□□□ -1.21
CLRN3-201ENST00000368671 TMEM41BQ5BJD5 291 aa7.5□□□□□ -1.21
CLRN3-201ENST00000368671 ACTL10Q5JWF8 245 aa7.5□□□□□ -1.21
CLRN3-201ENST00000368671 PVRIGQ6DKI7 326 aa7.5□□□□□ -1.21
CLRN3-201ENST00000368671 Q6ZTC4 211 aa7.5□□□□□ -1.21
CLRN3-201ENST00000368671 LHFPL1Q86WI0 220 aa7.5□□□□□ -1.21
CLRN3-201ENST00000368671 CENPSQ8N2Z9 138 aa7.5□□□□□ -1.21
CLRN3-201ENST00000368671 CCDC71LQ8N9Z2 235 aa7.5□□□□□ -1.21
CLRN3-201ENST00000368671 OR4X1Q8NH49 305 aa7.5□□□□□ -1.21
CLRN3-201ENST00000368671 RRNAD1Q96FB5 475 aaKnown RBP7.5□□□□□ -1.21
CLRN3-201ENST00000368671 GRAMD2BQ96HH9 432 aa7.5□□□□□ -1.21
CLRN3-201ENST00000368671 HRH4Q9H3N8 390 aa7.5□□□□□ -1.21
CLRN3-201ENST00000368671 PRR13Q9NZ81 148 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms