RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 LINC00205P59089 165 aa10.68□□□□□ -0.7
PTPRK-207ENST00000368226 TCF23Q7RTU1 214 aa10.68□□□□□ -0.7
PTPRK-207ENST00000368226 FAM19A2Q8N3H0 131 aa10.68□□□□□ -0.7
PTPRK-207ENST00000368226 FER1L6-AS1Q8NA97 138 aa10.68□□□□□ -0.7
PTPRK-207ENST00000368226 ZNF581Q9P0T4 197 aa10.68□□□□□ -0.7
PTPRK-207ENST00000368226 RNF222A6NCQ9 220 aa10.68□□□□□ -0.7
PTPRK-207ENST00000368226 SAP30O75446 220 aa10.68□□□□□ -0.7
PTPRK-207ENST00000368226 WNT2P09544 360 aa10.68□□□□□ -0.7
PTPRK-207ENST00000368226 RPL15P61313 204 aaKnown RBP10.68□□□□□ -0.7
PTPRK-207ENST00000368226 EFNB1P98172 346 aa10.68□□□□□ -0.7
PTPRK-207ENST00000368226 PSPNO60542 156 aa10.68□□□□□ -0.7
PTPRK-207ENST00000368226 DUTP33316 252 aaKnown RBP10.68□□□□□ -0.7
PTPRK-207ENST00000368226 FXYD7P58549 80 aa10.68□□□□□ -0.7
PTPRK-207ENST00000368226 FOXC2Q99958 501 aa10.68□□□□□ -0.7
PTPRK-207ENST00000368226 M0QZK8 103 aa10.68□□□□□ -0.7
PTPRK-207ENST00000368226 KLF17Q5JT82 389 aaPredicted RBP10.68□□□□□ -0.7
PTPRK-207ENST00000368226 OR5AN1Q8NGI8 311 aa10.68□□□□□ -0.7
PTPRK-207ENST00000368226 SCGB3A1Q96QR1 104 aa10.68□□□□□ -0.7
PTPRK-207ENST00000368226 CCL1P22362 96 aa10.68□□□□□ -0.7
PTPRK-207ENST00000368226 PSMG4Q5JS54 123 aa10.67□□□□□ -0.7
PTPRK-207ENST00000368226 GGACTQ9BVM4 153 aa10.67□□□□□ -0.7
PTPRK-207ENST00000368226 BTCP35070 178 aa10.67□□□□□ -0.7
PTPRK-207ENST00000368226 CA7P43166 264 aa10.67□□□□□ -0.7
PTPRK-207ENST00000368226 NDPQ00604 133 aa10.67□□□□□ -0.7
PTPRK-207ENST00000368226 VSIRQ9H7M9 311 aa10.67□□□□□ -0.7
PTPRK-207ENST00000368226 IL36BQ9NZH7 164 aa10.67□□□□□ -0.7
PTPRK-207ENST00000368226 CRIM1Q9NZV1 1036 aa10.67□□□□□ -0.7
PTPRK-207ENST00000368226 SLC25A15Q9Y619 301 aa10.67□□□□□ -0.7
PTPRK-207ENST00000368226 SLC25A34Q6PIV7 304 aa10.67□□□□□ -0.7
PTPRK-207ENST00000368226 GAGE10A6NGK3 116 aa10.67□□□□□ -0.7
PTPRK-207ENST00000368226 LINC00271P0C7V0 271 aa10.67□□□□□ -0.7
PTPRK-207ENST00000368226 SCGB1A1P11684 91 aa10.67□□□□□ -0.7
PTPRK-207ENST00000368226 COL8A2P25067 703 aa10.67□□□□□ -0.7
PTPRK-207ENST00000368226 C21orf62-AS1Q17RA5 79 aa10.67□□□□□ -0.7
PTPRK-207ENST00000368226 ZNF329Q86UD4 541 aa10.67□□□□□ -0.7
PTPRK-207ENST00000368226 ZNF414Q96IQ9 312 aa10.67□□□□□ -0.7
PTPRK-207ENST00000368226 COL25A1Q9BXS0 654 aaPredicted RBP10.67□□□□□ -0.7
PTPRK-207ENST00000368226 JKAMPQ9P055 326 aa10.67□□□□□ -0.7
PTPRK-207ENST00000368226 EVI2AP22794 236 aa10.67□□□□□ -0.7
PTPRK-207ENST00000368226 EFNA4P52798 201 aa10.67□□□□□ -0.7
PTPRK-207ENST00000368226 SRSF3P84103 164 aaKnown RBP10.67□□□□□ -0.7
PTPRK-207ENST00000368226 ZSWIM8A7E2V4 1837 aa10.67□□□□□ -0.7
PTPRK-207ENST00000368226 IGHV3-73A0A0B4J1V6 119 aa10.66□□□□□ -0.7
PTPRK-207ENST00000368226 HIGD1CA8MV81 97 aa10.66□□□□□ -0.7
PTPRK-207ENST00000368226 TDGF1P13385 188 aa10.66□□□□□ -0.7
PTPRK-207ENST00000368226 MDS2Q8NDY4 140 aa10.66□□□□□ -0.7
PTPRK-207ENST00000368226 H3BUX3 64 aa10.66□□□□□ -0.7
PTPRK-207ENST00000368226 SRP19P09132 144 aaKnown RBP10.66□□□□□ -0.7
PTPRK-207ENST00000368226 FABP2P12104 132 aa10.66□□□□□ -0.7
PTPRK-207ENST00000368226 ATP5IP56385 69 aaPredicted RBP10.66□□□□□ -0.7
PTPRK-207ENST00000368226 RPRMLQ8N4K4 120 aa10.66□□□□□ -0.7
PTPRK-207ENST00000368226 ESPL1Q14674 2120 aa10.66□□□□□ -0.7
PTPRK-207ENST00000368226 EP300Q09472 2414 aaPredicted RBP10.66□□□□□ -0.7
PTPRK-207ENST00000368226 TRAV41A0A0B4J266 112 aa10.66□□□□□ -0.7
PTPRK-207ENST00000368226 TMEM178BH3BS89 294 aa10.66□□□□□ -0.7
PTPRK-207ENST00000368226 C1QTNF9P0C862 333 aa10.66□□□□□ -0.7
PTPRK-207ENST00000368226 PMCHL1Q16048 86 aa10.66□□□□□ -0.7
PTPRK-207ENST00000368226 DEFB121Q5J5C9 76 aa10.66□□□□□ -0.7
PTPRK-207ENST00000368226 COL5A1-AS1Q5SY13 56 aa10.66□□□□□ -0.7
PTPRK-207ENST00000368226 LYPD2Q6UXB3 125 aa10.66□□□□□ -0.7
PTPRK-207ENST00000368226 Q71RC1 249 aaPredicted RBP10.66□□□□□ -0.7
PTPRK-207ENST00000368226 C17orf82Q86X59 251 aaPredicted RBP10.66□□□□□ -0.7
PTPRK-207ENST00000368226 RNF126Q9BV68 326 aa10.66□□□□□ -0.7
PTPRK-207ENST00000368226 SBF1O95248 1867 aa10.66□□□□□ -0.7
PTPRK-207ENST00000368226 TRAV3A0A0B4J244 114 aa10.66□□□□□ -0.7
PTPRK-207ENST00000368226 A0A1B0GUT8 65 aa10.66□□□□□ -0.7
PTPRK-207ENST00000368226 ZNF98A6NK75 572 aa10.66□□□□□ -0.7
PTPRK-207ENST00000368226 J3QRE1 110 aa10.66□□□□□ -0.7
PTPRK-207ENST00000368226 SRSF7Q16629 238 aaKnown RBP eCLIP10.66□□□□□ -0.7
PTPRK-207ENST00000368226 MED12Q93074 2177 aa10.66□□□□□ -0.7
PTPRK-207ENST00000368226 STAG3L2P0CL84 134 aa10.66□□□□□ -0.7
PTPRK-207ENST00000368226 IGHV1-8P0DP01 117 aa10.66□□□□□ -0.7
PTPRK-207ENST00000368226 PAX8Q06710 450 aa10.66□□□□□ -0.7
PTPRK-207ENST00000368226 PMCHL2Q9BQD1 86 aa10.66□□□□□ -0.7
PTPRK-207ENST00000368226 TBL2Q9Y4P3 447 aaKnown RBP10.66□□□□□ -0.7
PTPRK-207ENST00000368226 THSD7BQ9C0I4 1608 aa10.65□□□□□ -0.7
PTPRK-207ENST00000368226 H7C1H1 209 aa10.65□□□□□ -0.7
PTPRK-207ENST00000368226 C14orf144Q96I85 54 aa10.65□□□□□ -0.7
PTPRK-207ENST00000368226 TMEM144Q7Z5S9 345 aa10.65□□□□□ -0.7
PTPRK-207ENST00000368226 CACNG8Q8WXS5 425 aa10.65□□□□□ -0.7
PTPRK-207ENST00000368226 IGKV2-40A0A087WW87 121 aaPredicted RBP10.65□□□□□ -0.7
PTPRK-207ENST00000368226 IGKV2D-40P01614 121 aaPredicted RBP10.65□□□□□ -0.7
PTPRK-207ENST00000368226 ZNF415Q09FC8 603 aa10.65□□□□□ -0.7
PTPRK-207ENST00000368226 GTSCR1Q86UQ5 136 aa10.65□□□□□ -0.7
PTPRK-207ENST00000368226 CA1P00915 261 aaPredicted RBP10.65□□□□□ -0.71
PTPRK-207ENST00000368226 C15orf32Q32M92 178 aa10.65□□□□□ -0.71
PTPRK-207ENST00000368226 BMPERQ8N8U9 685 aa10.65□□□□□ -0.71
PTPRK-207ENST00000368226 WFDC1Q9HC57 220 aa10.65□□□□□ -0.71
PTPRK-207ENST00000368226 RPL35AP18077 110 aaKnown RBP10.64□□□□□ -0.71
PTPRK-207ENST00000368226 OR10J3Q5JRS4 329 aa10.64□□□□□ -0.71
PTPRK-207ENST00000368226 NAT1P18440 290 aa10.64□□□□□ -0.71
PTPRK-207ENST00000368226 IGFL4Q6B9Z1 124 aa10.64□□□□□ -0.71
PTPRK-207ENST00000368226 OTORQ9NRC9 128 aa10.64□□□□□ -0.71
PTPRK-207ENST00000368226 IGHV1-3A0A0C4DH29 117 aa10.64□□□□□ -0.71
PTPRK-207ENST00000368226 TMEM250H0YL14 139 aa10.64□□□□□ -0.71
PTPRK-207ENST00000368226 BPESC1Q9GZL8 116 aa10.64□□□□□ -0.71
PTPRK-207ENST00000368226 C11orf68Q9H3H3 251 aaKnown RBP10.64□□□□□ -0.71
PTPRK-207ENST00000368226 TMEM50AO95807 157 aa10.64□□□□□ -0.71
PTPRK-207ENST00000368226 LEPP41159 167 aa10.64□□□□□ -0.71
PTPRK-207ENST00000368226 LRTM2Q8N967 370 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms