RNA–Protein interactions for RNA: ENST00000367256.9

SYNE1-208, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 10,742 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-208ENST00000367256 FGF16O43320 207 aa6.19□□□□□ -1.42
SYNE1-208ENST00000367256 CTSSP25774 331 aa6.19□□□□□ -1.42
SYNE1-208ENST00000367256 NPIPB3Q92617 1050 aa6.19□□□□□ -1.42
SYNE1-208ENST00000367256 CHCHD1Q96BP2 118 aaKnown RBP6.19□□□□□ -1.42
SYNE1-208ENST00000367256 PILRAQ9UKJ1 303 aa6.19□□□□□ -1.42
SYNE1-208ENST00000367256 A0A0G2JLM5 398 aa6.19□□□□□ -1.42
SYNE1-208ENST00000367256 FAM90A9PA6NNJ1 464 aa6.19□□□□□ -1.42
SYNE1-208ENST00000367256 ZIC3O60481 467 aa6.19□□□□□ -1.42
SYNE1-208ENST00000367256 RASL11AQ6T310 242 aa6.19□□□□□ -1.42
SYNE1-208ENST00000367256 OR9G4Q8NGQ1 327 aa6.19□□□□□ -1.42
SYNE1-208ENST00000367256 GNB1LQ9BYB4 327 aa6.19□□□□□ -1.42
SYNE1-208ENST00000367256 IGKV1D-42A0A075B6H8 117 aa6.19□□□□□ -1.42
SYNE1-208ENST00000367256 Q5BKY6 102 aa6.19□□□□□ -1.42
SYNE1-208ENST00000367256 FHL5Q5TD97 284 aa6.19□□□□□ -1.42
SYNE1-208ENST00000367256 LINC01590Q5TEZ4 76 aa6.19□□□□□ -1.42
SYNE1-208ENST00000367256 SFTA2Q6UW10 78 aa6.19□□□□□ -1.42
SYNE1-208ENST00000367256 SIGMAR1Q99720 223 aa6.19□□□□□ -1.42
SYNE1-208ENST00000367256 RLFQ13129 1914 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 IGKV3D-20A0A0C4DH25 116 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 AHRRA9YTQ3 701 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 HIST1H2BKO60814 126 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 HIST1H2BJP06899 126 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 HIST1H2BOP23527 126 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 HIST1H2BBP33778 126 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 HIST1H2BDP58876 126 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 HIST1H2BCP62807 126 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 HIST2H2BEQ16778 126 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.18□□□□□ -1.42
SYNE1-208ENST00000367256 FAM90A1Q86YD7 464 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 DRAM1Q8N682 238 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 OSR1Q8TAX0 266 aaPredicted RBP6.18□□□□□ -1.42
SYNE1-208ENST00000367256 PLPPR1Q8TBJ4 325 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 HIST1H2BHQ93079 126 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 HIST1H2BNQ99877 126 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 HIST1H2BMQ99879 126 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 NRN1Q9NPD7 142 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 ATP5L2Q7Z4Y8 100 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 S4R3C0 116 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 IGHV3-35A0A0C4DH35 117 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 ACP7Q6ZNF0 438 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 MRPL20Q9BYC9 149 aaKnown RBP6.18□□□□□ -1.42
SYNE1-208ENST00000367256 FBXL7Q9UJT9 491 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 IGKV1-8A0A0C4DH67 115 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 CD28P10747 220 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 ATXN7O15265 892 aaPredicted RBP6.18□□□□□ -1.42
SYNE1-208ENST00000367256 SERF1AO75920 110 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 DPM2O94777 84 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 TRBV24-1A0A075B6N3 115 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 B9A039 149 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 TM4SF5O14894 197 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 ATXN8Q156A1 80 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 ZNF562Q6V9R5 426 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 VKORC1Q9BQB6 163 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 OSTCQ9NRP0 149 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 LOC101059948A0A1B0GTJ6 334 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 IGKV1D-33P01593 117 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 IGKV1-33P01594 117 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 HTN3P15516 51 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 IGLV3-21P80748 117 aaPredicted RBP6.18□□□□□ -1.42
SYNE1-208ENST00000367256 FBLN7Q53RD9 439 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 SMPXQ9UHP9 88 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 A0A0G2JK05 382 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 CTHRC1Q96CG8 243 aa6.18□□□□□ -1.42
SYNE1-208ENST00000367256 GAGE2EQ4V326 116 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 S100A7L2Q5SY68 101 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 FAM57AQ8TBR7 257 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 MGST2Q99735 147 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 GAGE2DQ9UEU5 116 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 HOXA3O43365 443 aaPredicted RBP6.17□□□□□ -1.42
SYNE1-208ENST00000367256 OR52E5Q8NH55 327 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 IFI27L2Q9H2X8 130 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 CST9LQ9H4G1 147 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 M0R2P5 195 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 IL9P15248 144 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 SRSF6Q13247 344 aaKnown RBP6.17□□□□□ -1.42
SYNE1-208ENST00000367256 NR2C2APQ86WQ0 139 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 CUL9Q8IWT3 2517 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 RNF222A6NCQ9 220 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 CD7P09564 240 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 IGFBP2P18065 325 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 HSD52Q0P140 79 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 HEPN1Q6WQI6 88 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 C21orf62Q9NYP8 219 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 PRR32B1ATL7 298 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 TIMM23BQ5SRD1 257 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 CHTOPQ9Y3Y2 248 aaKnown RBP6.17□□□□□ -1.42
SYNE1-208ENST00000367256 SIP14410 1827 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 PATE3B3GLJ2 98 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 NBEAP1P0C6P0 100 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 GNG5P63218 68 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 SRSF1Q07955 248 aaKnown RBP eCLIP6.17□□□□□ -1.42
SYNE1-208ENST00000367256 SLC22A18ASQ8N1D0 253 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 TMEM86BQ8N661 226 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 FGF11Q92914 225 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 AMELYQ99218 206 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 RAMP1O60894 148 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 A0A1W2PRX2 142 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 TNFSF13O75888 250 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 CCL20P78556 96 aa6.17□□□□□ -1.42
SYNE1-208ENST00000367256 EGR4Q05215 589 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms