RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 TRPT1Q86TN4 253 aaKnown RBP3.15□□□□□ -1.91
SYNE1-207ENST00000367255 SMIM10Q96HG1 83 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 FOXC2Q99958 501 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 PLAURQ03405 335 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 C5orf47Q569G3 176 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 WFDC3Q8IUB2 231 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 CACNA1CQ13936 2221 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 ICAM4Q14773 271 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 WFDC8Q8IUA0 241 aa3.15□□□□□ -1.91
SYNE1-207ENST00000367255 HAX1O00165 279 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 VCYO14598 125 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 KIAA1644Q3SXP7 199 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 GATD1Q8NB37 220 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 C18orf32Q8TCD1 76 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 LAMA4Q16363 1823 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 PGLYRP1O75594 196 aaPredicted RBP3.14□□□□□ -1.91
SYNE1-207ENST00000367255 OR10D3Q8NH80 312 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 Q8TCH9 128 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 TM2D2Q9BX73 214 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 LINC00574Q9H8X3 128 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 IGLV1-36A0A0B4J1U3 117 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 SMIM27A0A1W2PRY6 76 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 CD59P13987 128 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 MPV17P39210 176 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 PRADC1Q9BSG0 188 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 IGHV3-15A0A0B4J1V0 119 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 ITGBL1O95965 494 aaPredicted RBP3.14□□□□□ -1.91
SYNE1-207ENST00000367255 C19orf54Q5BKX5 351 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 IGHV3-21A0A0B4J1V1 117 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 PRSS46E5RG02 174 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 DGAT2L7PQ6IED9 249 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 FOXI2Q6ZQN5 318 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 TIAL1Q01085 375 aaKnown RBP eCLIP3.14□□□□□ -1.91
SYNE1-207ENST00000367255 FER1L6-AS1Q8NA97 138 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 TM4SF19Q96DZ7 209 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 PPIHO43447 177 aaKnown RBP3.14□□□□□ -1.91
SYNE1-207ENST00000367255 IGLV3-12A0A075B6K2 115 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 LINC00643Q86TS7 51 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 FAM106CPP0CH98 169 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 IER3P46695 156 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 OTOFQ9HC10 1997 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 HIGD1CA8MV81 97 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 ZNF525Q8N782 197 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 RGPD5Q99666 1765 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 IGKV3-11P04433 115 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 CFHR1Q03591 330 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 GAPTQ8N292 157 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 CCL4P13236 92 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 PRTN3P24158 256 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 CEACAM4O75871 244 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 CKS1BP61024 79 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 NHLRC4P0CG21 123 aaPredicted RBP3.14□□□□□ -1.91
SYNE1-207ENST00000367255 TFPI2P48307 235 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 GNG10P50151 68 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 F8WDY8 70 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 NWD2Q9ULI1 1742 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 C2CD4DB7Z1M9 353 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 LINC01553A4QN01 128 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 LAGE3Q14657 143 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 LINC00696Q6ZRV3 163 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 FGFRL1Q8N441 504 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 SPAG8Q99932 426 aaPredicted RBP3.14□□□□□ -1.91
SYNE1-207ENST00000367255 DEFB127Q9H1M4 99 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 HIVEP3Q5T1R4 2406 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 FAM157AC9JC47 383 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 BGLAPP02818 100 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 ODF3Q96PU9 254 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 RTN4RQ9BZR6 473 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 LOC389332A0A1B0GUA5 103 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 NPIPB5A8MRT5 1133 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 UQCRQO14949 82 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 IGHV3-48P01763 117 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 TFF2Q03403 129 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 NPIPB3Q92617 1050 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 BADQ92934 168 aa3.14□□□□□ -1.91
SYNE1-207ENST00000367255 COLQQ9Y215 455 aaPredicted RBP3.14□□□□□ -1.91
SYNE1-207ENST00000367255 HS3ST6Q96QI5 342 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 SDHAF1A6NFY7 115 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 TSSC4Q9Y5U2 329 aaPredicted RBP3.13□□□□□ -1.91
SYNE1-207ENST00000367255 MYMXA0A1B0GTQ4 84 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 K7EQS6 105 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 ZIC3O60481 467 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 PRORYQ9H606 182 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 NRACQ8N912 160 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 PRCDQ00LT1 54 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 LEPP41159 167 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 OR11H4Q8NGC9 324 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 PTH2Q96A98 100 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 PLAC1Q9HBJ0 212 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 TIMM17AQ99595 171 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 IGKCP01834 107 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 B4GALT1P15291 398 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 MIA3Q5JRA6 1907 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 FER1L4A9Z1Z3 1794 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 FAM208BQ5VWN6 2430 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 TRAV2A0A0B4J234 112 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 FAM223BA6NKX1 122 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 FAM223AQ8IWN6 122 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 MTCL1Q9Y4B5 1905 aaKnown RBP3.13□□□□□ -1.91
SYNE1-207ENST00000367255 A0A1W2PNR3 127 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms