RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 SSBP3Q9BWW4 388 aaPredicted RBP4.5□□□□□ -1.69
CDC42BPA-204ENST00000366767 ZDBF2Q9HCK1 2354 aa4.5□□□□□ -1.69
CDC42BPA-204ENST00000366767 IGHV1-2P23083 117 aa4.5□□□□□ -1.69
CDC42BPA-204ENST00000366767 PSG7Q13046 419 aa4.5□□□□□ -1.69
CDC42BPA-204ENST00000366767 MIC13Q5XKP0 118 aa4.5□□□□□ -1.69
CDC42BPA-204ENST00000366767 RNF144BQ7Z419 303 aa4.5□□□□□ -1.69
CDC42BPA-204ENST00000366767 RCC1LQ96I51 464 aaKnown RBP4.5□□□□□ -1.69
CDC42BPA-204ENST00000366767 MS4A6AQ9H2W1 248 aa4.5□□□□□ -1.69
CDC42BPA-204ENST00000366767 CALYQ9NYX4 217 aa4.5□□□□□ -1.69
CDC42BPA-204ENST00000366767 TRBV24-1A0A075B6N3 115 aa4.5□□□□□ -1.69
CDC42BPA-204ENST00000366767 KRTAP27-1Q3LI81 207 aa4.5□□□□□ -1.69
CDC42BPA-204ENST00000366767 LYPD6BQ8NI32 183 aa4.5□□□□□ -1.69
CDC42BPA-204ENST00000366767 PLPPR1Q8TBJ4 325 aa4.5□□□□□ -1.69
CDC42BPA-204ENST00000366767 R4GN57 208 aa4.5□□□□□ -1.69
CDC42BPA-204ENST00000366767 LOC105371242A0A075B767 164 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 PPIAL4CA0A0B4J2A2 164 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 LY6G6EA0A0G2JKS1 128 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 GOSR1O95249 250 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 PPIAL4GP0DN37 164 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 ADCYAP1P18509 176 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 TMPRSS3P57727 454 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 PCSK4Q6UW60 755 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 SRSF12Q8WXF0 261 aaKnown RBP4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 FZR1Q9UM11 496 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 U3KQA8 63 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 PGPA6NDG6 321 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 EGR1P18146 543 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 RTN4RL2Q86UN3 420 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 PINLYPA6NC86 204 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 FOXA3P55318 350 aaPredicted RBP4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 RSPO1Q2MKA7 263 aaPredicted RBP4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 GFRALQ6UXV0 394 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 FOXC2Q99958 501 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 MESP1Q9BRJ9 268 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 AGMATQ9BSE5 352 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 E9PLN8 166 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 CEACAM3P40198 252 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 IGHV1-69-2A0A0G2JMI3 117 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 M0QZ24 198 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 CELA3AP09093 270 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 PRTN3P24158 256 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 GCHFRP30047 84 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 C18orf15Q96N68 181 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 DLX6P56179 175 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 FAM53AQ6NSI3 398 aaPredicted RBP4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 TMEM190Q8WZ59 177 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 C16orf97H3BN30 126 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 TDGF1P13385 188 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 FAM222BQ8WU58 562 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 NPCDR1Q9BY65 106 aa4.49□□□□□ -1.69
CDC42BPA-204ENST00000366767 PRSS47A8MTI9 375 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 C3orf80F5H4A9 247 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 RSPO4Q2I0M5 234 aaPredicted RBP4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 ADAMTSL5Q6ZMM2 481 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 OR4A5Q8NH83 315 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 PRELID3AQ96N28 172 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 C5orf63A6NC05 138 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 SH2D7A6NKC9 451 aaPredicted RBP4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 HYPMO75409 117 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 Q0VFX4 171 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 MBNL2Q5VZF2 373 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 Q6P435 159 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 GATAD1Q8WUU5 269 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 HARBI1Q96MB7 349 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 ZNF714Q96N38 554 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 SNHG12Q9BXW3 62 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 ONECUT1Q9UBC0 465 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 EPDR1Q9UM22 224 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 PRR14LQ5THK1 2151 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 SCO2A0A1W2PP80 73 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 SELLP14151 372 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 TBR1Q16650 682 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 TMEM14EPQ6UXP3 125 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 SLC25A2Q9BXI2 301 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 MBNL3Q9NUK0 354 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 TCF19Q9Y242 345 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 MED12LQ86YW9 2145 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 DLL1O00548 723 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 NDUFA3O95167 84 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 CDKN1BP46527 198 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 C19orf54Q5BKX5 351 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 ACTL10Q5JWF8 245 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 C9orf153Q5TBE3 101 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 ZNF826PQ6ZT77 177 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 MDS2Q8NDY4 140 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 NAA38Q9BRA0 125 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 WDR83OSQ9Y284 106 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 ATP5LO75964 103 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 WISP1O95388 367 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 ANOS1P23352 680 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 OSR1Q8TAX0 266 aaPredicted RBP4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 RAB1CQ92928 201 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 KLK15Q9H2R5 256 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 TMPRSS2O15393 492 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 KLK10O43240 276 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 TNFRSF6BO95407 300 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 IGHV3-13P01766 116 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 IGHV3-7P01780 117 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 GZMBP10144 247 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 ERVK11-1P61568 191 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms