RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 ZNF773Q6PK81 442 aa5.95□□□□□ -1.46
HMGB1P39-201ENST00000366304 ZNF66Q6ZN08 573 aa5.95□□□□□ -1.46
HMGB1P39-201ENST00000366304 GDPD1Q8N9F7 314 aa5.95□□□□□ -1.46
HMGB1P39-201ENST00000366304 UFD1Q92890 307 aa5.95□□□□□ -1.46
HMGB1P39-201ENST00000366304 C20orf173Q96LM9 149 aa5.95□□□□□ -1.46
HMGB1P39-201ENST00000366304 KRTAP4-7Q9BYR0 210 aa5.95□□□□□ -1.46
HMGB1P39-201ENST00000366304 IFT46Q9NQC8 304 aa5.95□□□□□ -1.46
HMGB1P39-201ENST00000366304 DKK2Q9UBU2 259 aa5.95□□□□□ -1.46
HMGB1P39-201ENST00000366304 SPATA2Q9UM82 520 aa5.95□□□□□ -1.46
HMGB1P39-201ENST00000366304 PRELID3BQ9Y3B1 194 aa5.95□□□□□ -1.46
HMGB1P39-201ENST00000366304 TRAV14DV4A0A0A6YYC5 116 aa5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 WRBO00258 174 aa5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 UPK2O00526 184 aa5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 YIF1AO95070 293 aa5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 DIRAS3O95661 229 aa5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 IGHV3-48P01763 117 aa5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 HLA-DQB1P01920 261 aa5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 SERPINE2P07093 398 aa5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 ZNF688P0C7X2 276 aa5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 IL7P13232 177 aa5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 ZNF182P17025 639 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 MYL12AP19105 171 aa5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 NFYAP23511 347 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 HTR2BP41595 481 aa5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 TAS2R43P59537 309 aa5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 GABARAPL2P60520 117 aa5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 RAB4BP61018 213 aa5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 CD300CQ08708 224 aa5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 ACSM3Q53FZ2 586 aa5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 Q56UQ5 140 aa5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 TMEM41BQ5BJD5 291 aa5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 SYT8Q8NBV8 401 aa5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 OR4S2Q8NH73 311 aa5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 VSTM2AQ8TAG5 236 aa5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 ZFAND1Q8TCF1 268 aa5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 TCTEX1D2Q8WW35 142 aa5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 GINS4Q9BRT9 223 aa5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 PLCXD1Q9NUJ7 323 aa5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 BET1LQ9NYM9 111 aa5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 TAS2R8Q9NYW2 309 aa5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 XCL2Q9UBD3 114 aa5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 PSORS1C1Q9UIG5 152 aa5.94□□□□□ -1.46
HMGB1P39-201ENST00000366304 TRAV2A0A0B4J234 112 aa5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 TEX50A0A1B0GTY4 177 aa5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 ZNF705FA8MVS1 300 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 F8W036 122 aa5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 DNASE2O00115 360 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 MFNGO00587 321 aa5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 ST8SIA3O43173 380 aa5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 PLA2G1BP04054 148 aaKnown RBP5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 ZNF705DP0CH99 300 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 ZNF705BP0CI00 300 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 SPART-AS1P0CW21 52 aa5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 GNB3P16520 340 aa5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 HLA-DMAP28067 261 aa5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 FAM3BP58499 235 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 KRTAP10-1P60331 282 aa5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 HAMPP81172 84 aa5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 ST3GAL4Q11206 333 aa5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 FAM222AQ5U5X8 452 aa5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 TOMM20LQ6UXN7 152 aa5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 ZNF705AQ6ZN79 300 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 AHSA2Q719I0 299 aa5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 TCTE3Q8IZS6 198 aa5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 BPIFB6Q8NFQ5 453 aa5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 PHYHIPQ92561 330 aa5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 CMTM3Q96MX0 182 aa5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 RAB40CQ96S21 281 aa5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 ATP6V0BQ99437 205 aa5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 URM1Q9BTM9 101 aaKnown RBP5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 NXF2Q9GZY0 626 aaKnown RBP5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 HRASLSQ9HDD0 168 aa5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 THYN1Q9P016 225 aa5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 RABAC1Q9UI14 185 aa5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 MRPS7Q9Y2R9 242 aaKnown RBP5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 OR2W1Q9Y3N9 320 aa5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 LINC00588Q9Y4M8 146 aa5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 F11RQ9Y624 299 aaKnown RBP5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 LRP1Q07954 4544 aaKnown RBP5.93□□□□□ -1.46
HMGB1P39-201ENST00000366304 PCP4L1A6NKN8 68 aa5.92□□□□□ -1.46
HMGB1P39-201ENST00000366304 KRBOX1C9JBD0 128 aa5.92□□□□□ -1.46
HMGB1P39-201ENST00000366304 I3L2K1 104 aa5.92□□□□□ -1.46
HMGB1P39-201ENST00000366304 TNFSF12O43508 249 aa5.92□□□□□ -1.46
HMGB1P39-201ENST00000366304 CD1AP06126 327 aa5.92□□□□□ -1.46
HMGB1P39-201ENST00000366304 RPL11P62913 178 aaKnown RBP5.92□□□□□ -1.46
HMGB1P39-201ENST00000366304 PAFAH1B2P68402 229 aa5.92□□□□□ -1.46
HMGB1P39-201ENST00000366304 DLK1P80370 383 aa5.92□□□□□ -1.46
HMGB1P39-201ENST00000366304 LYSMD2Q8IV50 215 aa5.92□□□□□ -1.46
HMGB1P39-201ENST00000366304 DUSP18Q8NEJ0 188 aa5.92□□□□□ -1.46
HMGB1P39-201ENST00000366304 DCANP1Q8TF63 244 aa5.92□□□□□ -1.46
HMGB1P39-201ENST00000366304 FRZBQ92765 325 aa5.92□□□□□ -1.46
HMGB1P39-201ENST00000366304 HSD17B10Q99714 261 aaKnown RBP5.92□□□□□ -1.46
HMGB1P39-201ENST00000366304 SRSF8Q9BRL6 282 aaKnown RBP5.92□□□□□ -1.46
HMGB1P39-201ENST00000366304 NIPSNAP3BQ9BS92 247 aa5.92□□□□□ -1.46
HMGB1P39-201ENST00000366304 CCDC32Q9BV29 185 aa5.92□□□□□ -1.46
HMGB1P39-201ENST00000366304 QTRT1Q9BXR0 403 aaKnown RBP5.92□□□□□ -1.46
HMGB1P39-201ENST00000366304 RNF167Q9H6Y7 350 aa5.92□□□□□ -1.46
HMGB1P39-201ENST00000366304 SCN3BQ9NY72 215 aa5.92□□□□□ -1.46
HMGB1P39-201ENST00000366304 TMED3Q9Y3Q3 217 aa5.92□□□□□ -1.46
HMGB1P39-201ENST00000366304 A0A075B6Q4 140 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms