RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 IGFL4Q6B9Z1 124 aa16.85■□□□□ 0.29
CDC42BPB-201ENST00000361246 ASCL2Q99929 193 aa16.85■□□□□ 0.29
CDC42BPB-201ENST00000361246 KIF26BQ2KJY2 2108 aa16.85■□□□□ 0.29
CDC42BPB-201ENST00000361246 APOHP02749 345 aaPredicted RBP16.85■□□□□ 0.29
CDC42BPB-201ENST00000361246 MPDZO75970 2070 aa16.85■□□□□ 0.29
CDC42BPB-201ENST00000361246 TCF21O43680 179 aa16.85■□□□□ 0.29
CDC42BPB-201ENST00000361246 TRBV7-9A0A0J9YWB2 115 aa16.85■□□□□ 0.29
CDC42BPB-201ENST00000361246 LOC102723996A0A087X1L8 192 aa16.84■□□□□ 0.29
CDC42BPB-201ENST00000361246 DSCR9P59020 149 aa16.84■□□□□ 0.29
CDC42BPB-201ENST00000361246 LYPD2Q6UXB3 125 aa16.84■□□□□ 0.29
CDC42BPB-201ENST00000361246 MGAMO43451 1857 aa16.84■□□□□ 0.29
CDC42BPB-201ENST00000361246 IGKV2-40A0A087WW87 121 aaPredicted RBP16.84■□□□□ 0.29
CDC42BPB-201ENST00000361246 IGKV2D-40P01614 121 aaPredicted RBP16.84■□□□□ 0.29
CDC42BPB-201ENST00000361246 HBBP68871 147 aa16.84■□□□□ 0.29
CDC42BPB-201ENST00000361246 CFHR3Q02985 330 aa16.84■□□□□ 0.29
CDC42BPB-201ENST00000361246 DMRTA1Q5VZB9 504 aa16.84■□□□□ 0.29
CDC42BPB-201ENST00000361246 FER1L6-AS1Q8NA97 138 aa16.84■□□□□ 0.29
CDC42BPB-201ENST00000361246 B4DSR2 109 aa16.84■□□□□ 0.29
CDC42BPB-201ENST00000361246 OR9G9P0C7N8 305 aa16.83■□□□□ 0.29
CDC42BPB-201ENST00000361246 CNTFRP26992 372 aa16.83■□□□□ 0.29
CDC42BPB-201ENST00000361246 FANCMQ8IYD8 2048 aa16.83■□□□□ 0.28
CDC42BPB-201ENST00000361246 UPK2O00526 184 aa16.83■□□□□ 0.28
CDC42BPB-201ENST00000361246 ZNF660Q6AZW8 331 aaPredicted RBP16.83■□□□□ 0.28
CDC42BPB-201ENST00000361246 GGNQ86UU5 652 aa16.83■□□□□ 0.28
CDC42BPB-201ENST00000361246 FAM89BQ8N5H3 189 aa16.83■□□□□ 0.28
CDC42BPB-201ENST00000361246 M0QZK8 103 aa16.83■□□□□ 0.28
CDC42BPB-201ENST00000361246 LILRA1O75019 489 aa16.83■□□□□ 0.28
CDC42BPB-201ENST00000361246 ZNF688P0C7X2 276 aa16.83■□□□□ 0.28
CDC42BPB-201ENST00000361246 C15orf32Q32M92 178 aa16.83■□□□□ 0.28
CDC42BPB-201ENST00000361246 ZNF497Q6ZNH5 498 aa16.83■□□□□ 0.28
CDC42BPB-201ENST00000361246 PIP4P2Q8N4L2 257 aa16.83■□□□□ 0.28
CDC42BPB-201ENST00000361246 AKAP6Q13023 2319 aa16.83■□□□□ 0.28
CDC42BPB-201ENST00000361246 IGLV3-12A0A075B6K2 115 aa16.82■□□□□ 0.28
CDC42BPB-201ENST00000361246 SFTA2Q6UW10 78 aa16.82■□□□□ 0.28
CDC42BPB-201ENST00000361246 FAM90A1Q86YD7 464 aa16.82■□□□□ 0.28
CDC42BPB-201ENST00000361246 COL25A1Q9BXS0 654 aaPredicted RBP16.82■□□□□ 0.28
CDC42BPB-201ENST00000361246 VENTXO95231 258 aa16.82■□□□□ 0.28
CDC42BPB-201ENST00000361246 HLA-DQA1P01909 254 aa16.82■□□□□ 0.28
CDC42BPB-201ENST00000361246 STAG3L2P0CL84 134 aa16.82■□□□□ 0.28
CDC42BPB-201ENST00000361246 LINC01356Q8N9X3 169 aa16.82■□□□□ 0.28
CDC42BPB-201ENST00000361246 NUDT11Q96G61 164 aa16.82■□□□□ 0.28
CDC42BPB-201ENST00000361246 PHF3Q92576 2039 aaKnown RBP16.82■□□□□ 0.28
CDC42BPB-201ENST00000361246 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.82■□□□□ 0.28
CDC42BPB-201ENST00000361246 RNF125Q96EQ8 232 aa16.82■□□□□ 0.28
CDC42BPB-201ENST00000361246 RNASE7Q9H1E1 156 aaKnown RBP16.82■□□□□ 0.28
CDC42BPB-201ENST00000361246 COL5A1-AS1Q5SY13 56 aa16.82■□□□□ 0.28
CDC42BPB-201ENST00000361246 ZNF319Q9P2F9 582 aa16.82■□□□□ 0.28
CDC42BPB-201ENST00000361246 MED12Q93074 2177 aa16.82■□□□□ 0.28
CDC42BPB-201ENST00000361246 J3QW42 95 aa16.81■□□□□ 0.28
CDC42BPB-201ENST00000361246 TIMP3P35625 211 aa16.81■□□□□ 0.28
CDC42BPB-201ENST00000361246 RPRMLQ8N4K4 120 aa16.81■□□□□ 0.28
CDC42BPB-201ENST00000361246 J3QKU1 62 aa16.81■□□□□ 0.28
CDC42BPB-201ENST00000361246 TMEM50AO95807 157 aa16.81■□□□□ 0.28
CDC42BPB-201ENST00000361246 TXNDC17Q9BRA2 123 aa16.81■□□□□ 0.28
CDC42BPB-201ENST00000361246 CACNA1BQ00975 2339 aa16.81■□□□□ 0.28
CDC42BPB-201ENST00000361246 GATAD1Q8WUU5 269 aa16.81■□□□□ 0.28
CDC42BPB-201ENST00000361246 RTBDNQ9BSG5 229 aaPredicted RBP16.81■□□□□ 0.28
CDC42BPB-201ENST00000361246 ALX4Q9H161 411 aaPredicted RBP16.81■□□□□ 0.28
CDC42BPB-201ENST00000361246 TRAV5A0A0B4J249 113 aa16.81■□□□□ 0.28
CDC42BPB-201ENST00000361246 TMEM178BH3BS89 294 aa16.81■□□□□ 0.28
CDC42BPB-201ENST00000361246 OR1P1Q8NH06 330 aa16.81■□□□□ 0.28
CDC42BPB-201ENST00000361246 SSBP4Q9BWG4 385 aaPredicted RBP16.81■□□□□ 0.28
CDC42BPB-201ENST00000361246 TM2D1Q9BX74 207 aa16.81■□□□□ 0.28
CDC42BPB-201ENST00000361246 MSRB2Q9Y3D2 182 aa16.81■□□□□ 0.28
CDC42BPB-201ENST00000361246 TBX6O95947 436 aaPredicted RBP16.8■□□□□ 0.28
CDC42BPB-201ENST00000361246 TRGV1A0A0A0MS02 117 aa16.8■□□□□ 0.28
CDC42BPB-201ENST00000361246 FCN3O75636 299 aa16.8■□□□□ 0.28
CDC42BPB-201ENST00000361246 FOLR2P14207 255 aa16.8■□□□□ 0.28
CDC42BPB-201ENST00000361246 PAX1P15863 534 aa16.8■□□□□ 0.28
CDC42BPB-201ENST00000361246 C2orf68Q2NKX9 166 aa16.8■□□□□ 0.28
CDC42BPB-201ENST00000361246 ADARB2-AS1A8MUL3 147 aa16.8■□□□□ 0.28
CDC42BPB-201ENST00000361246 UCP3P55916 312 aa16.8■□□□□ 0.28
CDC42BPB-201ENST00000361246 ZNF506Q5JVG8 444 aa16.8■□□□□ 0.28
CDC42BPB-201ENST00000361246 FMC1Q96HJ9 113 aa16.8■□□□□ 0.28
CDC42BPB-201ENST00000361246 LINC00205P59089 165 aa16.79■□□□□ 0.28
CDC42BPB-201ENST00000361246 C20orf204Q6ZNR8 217 aa16.79■□□□□ 0.28
CDC42BPB-201ENST00000361246 MRPS16Q9Y3D3 137 aaKnown RBP16.79■□□□□ 0.28
CDC42BPB-201ENST00000361246 TMEM136Q6ZRR5 245 aa16.79■□□□□ 0.28
CDC42BPB-201ENST00000361246 CBY1Q9Y3M2 126 aa16.79■□□□□ 0.28
CDC42BPB-201ENST00000361246 C19orf24Q9BVV8 132 aa16.79■□□□□ 0.28
CDC42BPB-201ENST00000361246 IFT22Q9H7X7 185 aa16.79■□□□□ 0.28
CDC42BPB-201ENST00000361246 GZMBP10144 247 aa16.79■□□□□ 0.28
CDC42BPB-201ENST00000361246 CA7P43166 264 aa16.79■□□□□ 0.28
CDC42BPB-201ENST00000361246 NUDT10Q8NFP7 164 aa16.79■□□□□ 0.28
CDC42BPB-201ENST00000361246 KLHDC3Q9BQ90 382 aa16.79■□□□□ 0.28
CDC42BPB-201ENST00000361246 FAM186AA6NE01 2351 aa16.79■□□□□ 0.28
CDC42BPB-201ENST00000361246 PLSCR4Q9NRQ2 329 aa16.79■□□□□ 0.28
CDC42BPB-201ENST00000361246 YPEL1O60688 119 aa16.78■□□□□ 0.28
CDC42BPB-201ENST00000361246 ZNF324BQ6AW86 544 aaPredicted RBP16.78■□□□□ 0.28
CDC42BPB-201ENST00000361246 YPEL2Q96QA6 119 aa16.78■□□□□ 0.28
CDC42BPB-201ENST00000361246 FNDC1Q4ZHG4 1894 aaPredicted RBP16.78■□□□□ 0.28
CDC42BPB-201ENST00000361246 FREM3P0C091 2139 aa16.78■□□□□ 0.28
CDC42BPB-201ENST00000361246 APOMO95445 188 aa16.78■□□□□ 0.28
CDC42BPB-201ENST00000361246 HIST1H2BAQ96A08 127 aa16.78■□□□□ 0.28
CDC42BPB-201ENST00000361246 ZNRD1Q9P1U0 126 aa16.78■□□□□ 0.28
CDC42BPB-201ENST00000361246 ZNF414Q96IQ9 312 aa16.78■□□□□ 0.28
CDC42BPB-201ENST00000361246 MBNL3Q9NUK0 354 aaKnown RBP16.78■□□□□ 0.28
CDC42BPB-201ENST00000361246 SHISA3A0PJX4 238 aa16.78■□□□□ 0.28
CDC42BPB-201ENST00000361246 JOSD1Q15040 202 aaPredicted RBP16.78■□□□□ 0.28
CDC42BPB-201ENST00000361246 FAM19A2Q8N3H0 131 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms