RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 C3AR1Q16581 482 aa11.2□□□□□ -0.62
SRGAP3-201ENST00000360413 C9orf153Q5TBE3 101 aa11.2□□□□□ -0.62
SRGAP3-201ENST00000360413 ZNF784Q8NCA9 323 aaPredicted RBP11.2□□□□□ -0.62
SRGAP3-201ENST00000360413 SCN10AQ9Y5Y9 1956 aa11.2□□□□□ -0.62
SRGAP3-201ENST00000360413 IGKV3D-20A0A0C4DH25 116 aa11.2□□□□□ -0.62
SRGAP3-201ENST00000360413 AMBPP02760 352 aa11.2□□□□□ -0.62
SRGAP3-201ENST00000360413 STPG1Q5TH74 334 aa11.2□□□□□ -0.62
SRGAP3-201ENST00000360413 ERG28Q9UKR5 140 aa11.2□□□□□ -0.62
SRGAP3-201ENST00000360413 M0R2P5 195 aa11.2□□□□□ -0.62
SRGAP3-201ENST00000360413 HBDP02042 147 aa11.2□□□□□ -0.62
SRGAP3-201ENST00000360413 TDGF1P3P51864 188 aa11.2□□□□□ -0.62
SRGAP3-201ENST00000360413 TFF3Q07654 80 aa11.2□□□□□ -0.62
SRGAP3-201ENST00000360413 PRADC1Q9BSG0 188 aa11.2□□□□□ -0.62
SRGAP3-201ENST00000360413 A0A0G2JMM0 328 aa11.2□□□□□ -0.62
SRGAP3-201ENST00000360413 A0A1W2PPB8 328 aa11.2□□□□□ -0.62
SRGAP3-201ENST00000360413 KIR3DP1A8MWS1 328 aa11.2□□□□□ -0.62
SRGAP3-201ENST00000360413 TMEM238C9JI98 176 aa11.2□□□□□ -0.62
SRGAP3-201ENST00000360413 CEACAM1P13688 526 aa11.2□□□□□ -0.62
SRGAP3-201ENST00000360413 C1orf100Q5SVJ3 147 aa11.2□□□□□ -0.62
SRGAP3-201ENST00000360413 TCF19Q9Y242 345 aa11.2□□□□□ -0.62
SRGAP3-201ENST00000360413 MOSP00540 346 aa11.19□□□□□ -0.62
SRGAP3-201ENST00000360413 F2Z2F3 143 aa11.19□□□□□ -0.62
SRGAP3-201ENST00000360413 TRBV5-7A0A0A0MS05 114 aa11.19□□□□□ -0.62
SRGAP3-201ENST00000360413 LIMS1P48059 325 aa11.19□□□□□ -0.62
SRGAP3-201ENST00000360413 DLX4Q92988 240 aaPredicted RBP11.19□□□□□ -0.62
SRGAP3-201ENST00000360413 SPINT1O43278 529 aa11.19□□□□□ -0.62
SRGAP3-201ENST00000360413 CHCHD1Q96BP2 118 aaKnown RBP11.19□□□□□ -0.62
SRGAP3-201ENST00000360413 NBEAP1P0C6P0 100 aa11.19□□□□□ -0.62
SRGAP3-201ENST00000360413 SRSF1Q07955 248 aaKnown RBP eCLIP11.19□□□□□ -0.62
SRGAP3-201ENST00000360413 DPM3Q9P2X0 92 aa11.19□□□□□ -0.62
SRGAP3-201ENST00000360413 CISD3P0C7P0 127 aa11.19□□□□□ -0.62
SRGAP3-201ENST00000360413 GZMBP10144 247 aa11.19□□□□□ -0.62
SRGAP3-201ENST00000360413 LINC01565O15544 149 aa11.18□□□□□ -0.62
SRGAP3-201ENST00000360413 FER1L6-AS1Q8NA97 138 aa11.18□□□□□ -0.62
SRGAP3-201ENST00000360413 NPIPB3Q92617 1050 aa11.18□□□□□ -0.62
SRGAP3-201ENST00000360413 MRPL20Q9BYC9 149 aaKnown RBP11.18□□□□□ -0.62
SRGAP3-201ENST00000360413 VDAC2P45880 294 aaPredicted RBP11.18□□□□□ -0.62
SRGAP3-201ENST00000360413 OR9G4Q8NGQ1 327 aa11.18□□□□□ -0.62
SRGAP3-201ENST00000360413 YBX2Q9Y2T7 364 aaKnown RBP11.18□□□□□ -0.62
SRGAP3-201ENST00000360413 ZNF831Q5JPB2 1677 aa11.18□□□□□ -0.62
SRGAP3-201ENST00000360413 PEAR1Q5VY43 1037 aaPredicted RBP11.18□□□□□ -0.62
SRGAP3-201ENST00000360413 SCARF2Q96GP6 870 aaPredicted RBP11.18□□□□□ -0.62
SRGAP3-201ENST00000360413 ITLN1Q8WWA0 313 aa11.18□□□□□ -0.62
SRGAP3-201ENST00000360413 UPK3AO75631 287 aa11.18□□□□□ -0.62
SRGAP3-201ENST00000360413 DLL3Q9NYJ7 618 aa11.18□□□□□ -0.62
SRGAP3-201ENST00000360413 ARHGAP32A7KAX9 2087 aa11.18□□□□□ -0.62
SRGAP3-201ENST00000360413 MUC4Q99102 2169 aa11.18□□□□□ -0.62
SRGAP3-201ENST00000360413 GLRXP35754 106 aa11.17□□□□□ -0.62
SRGAP3-201ENST00000360413 C1QL4Q86Z23 238 aa11.17□□□□□ -0.62
SRGAP3-201ENST00000360413 CHTOPQ9Y3Y2 248 aaKnown RBP11.17□□□□□ -0.62
SRGAP3-201ENST00000360413 UBR3Q6ZT12 1888 aa11.17□□□□□ -0.62
SRGAP3-201ENST00000360413 LRP5O75197 1615 aa11.17□□□□□ -0.62
SRGAP3-201ENST00000360413 UMODP07911 640 aa11.17□□□□□ -0.62
SRGAP3-201ENST00000360413 NRN1LQ496H8 165 aa11.17□□□□□ -0.62
SRGAP3-201ENST00000360413 OR13A1Q8NGR1 328 aa11.17□□□□□ -0.62
SRGAP3-201ENST00000360413 A0A087X0K7 114 aa11.17□□□□□ -0.62
SRGAP3-201ENST00000360413 IGKV3-20P01619 116 aa11.17□□□□□ -0.62
SRGAP3-201ENST00000360413 Q96M66 194 aa11.17□□□□□ -0.62
SRGAP3-201ENST00000360413 GDF15Q99988 308 aa11.17□□□□□ -0.62
SRGAP3-201ENST00000360413 C1QTNF4Q9BXJ3 329 aa11.17□□□□□ -0.62
SRGAP3-201ENST00000360413 FAM60AQ9NP50 221 aa11.17□□□□□ -0.62
SRGAP3-201ENST00000360413 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.16□□□□□ -0.62
SRGAP3-201ENST00000360413 PSCAO43653 123 aa11.16□□□□□ -0.62
SRGAP3-201ENST00000360413 DSCR9P59020 149 aa11.16□□□□□ -0.62
SRGAP3-201ENST00000360413 SMRP1Q8NCR6 262 aa11.16□□□□□ -0.62
SRGAP3-201ENST00000360413 SMPXQ9UHP9 88 aa11.16□□□□□ -0.62
SRGAP3-201ENST00000360413 EREGO14944 169 aa11.16□□□□□ -0.62
SRGAP3-201ENST00000360413 OR5P3Q8WZ94 311 aa11.16□□□□□ -0.62
SRGAP3-201ENST00000360413 NHSL1Q5SYE7 1610 aa11.16□□□□□ -0.62
SRGAP3-201ENST00000360413 IGHV1-45A0A0A0MS14 117 aa11.16□□□□□ -0.62
SRGAP3-201ENST00000360413 TRAV14DV4A0A0A6YYC5 116 aa11.16□□□□□ -0.62
SRGAP3-201ENST00000360413 PSG4Q00888 419 aa11.16□□□□□ -0.62
SRGAP3-201ENST00000360413 C21orf62Q9NYP8 219 aa11.16□□□□□ -0.62
SRGAP3-201ENST00000360413 CENPVL1A0A0U1RR11 272 aa11.16□□□□□ -0.62
SRGAP3-201ENST00000360413 RNF222A6NCQ9 220 aa11.16□□□□□ -0.62
SRGAP3-201ENST00000360413 CEACAM8P31997 349 aaPredicted RBP11.16□□□□□ -0.62
SRGAP3-201ENST00000360413 FAM89BQ8N5H3 189 aa11.16□□□□□ -0.62
SRGAP3-201ENST00000360413 PRSS22Q9GZN4 317 aa11.16□□□□□ -0.62
SRGAP3-201ENST00000360413 C2orf82Q6UX34 121 aa11.16□□□□□ -0.62
SRGAP3-201ENST00000360413 ZNF385AQ96PM9 386 aaKnown RBP11.16□□□□□ -0.62
SRGAP3-201ENST00000360413 ZNF703Q9H7S9 590 aaPredicted RBP11.16□□□□□ -0.62
SRGAP3-201ENST00000360413 LCTP09848 1927 aa11.16□□□□□ -0.62
SRGAP3-201ENST00000360413 IL11P20809 199 aa11.16□□□□□ -0.62
SRGAP3-201ENST00000360413 ADAMTSL5Q6ZMM2 481 aa11.16□□□□□ -0.62
SRGAP3-201ENST00000360413 Q6ZT83 130 aa11.16□□□□□ -0.62
SRGAP3-201ENST00000360413 BCL6BQ8N143 479 aaPredicted RBP11.16□□□□□ -0.62
SRGAP3-201ENST00000360413 GTF3AQ92664 365 aaKnown RBP11.16□□□□□ -0.62
SRGAP3-201ENST00000360413 OR52E5Q8NH55 327 aa11.15□□□□□ -0.62
SRGAP3-201ENST00000360413 SEPSECSQ9HD40 501 aaKnown RBP11.15□□□□□ -0.62
SRGAP3-201ENST00000360413 KLF12Q9Y4X4 402 aa11.15□□□□□ -0.62
SRGAP3-201ENST00000360413 C1QCP02747 245 aa11.15□□□□□ -0.62
SRGAP3-201ENST00000360413 TRGV4A0A0C4DH28 118 aa11.15□□□□□ -0.62
SRGAP3-201ENST00000360413 PTPRQQ9UMZ3 2332 aa11.15□□□□□ -0.62
SRGAP3-201ENST00000360413 C1QTNF9P0C862 333 aa11.15□□□□□ -0.62
SRGAP3-201ENST00000360413 ZNF721Q8TF20 911 aa11.15□□□□□ -0.62
SRGAP3-201ENST00000360413 LEAP2Q969E1 77 aa11.15□□□□□ -0.62
SRGAP3-201ENST00000360413 AMELYQ99218 206 aa11.15□□□□□ -0.62
SRGAP3-201ENST00000360413 PIN1P1O15428 100 aa11.15□□□□□ -0.62
SRGAP3-201ENST00000360413 IGFBP2P18065 325 aa11.15□□□□□ -0.62
SRGAP3-201ENST00000360413 DRD3P35462 400 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms