RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 ZNF462Q96JM2 2506 aa5.8□□□□□ -1.48
RAB5B-201ENST00000360299 CFHR2P36980 270 aa5.8□□□□□ -1.48
RAB5B-201ENST00000360299 HERPUD1Q15011 391 aa5.8□□□□□ -1.48
RAB5B-201ENST00000360299 ELOBQ15370 118 aa5.8□□□□□ -1.48
RAB5B-201ENST00000360299 SPANXN1Q5VSR9 72 aa5.8□□□□□ -1.48
RAB5B-201ENST00000360299 WDR25Q64LD2 544 aaPredicted RBP5.8□□□□□ -1.48
RAB5B-201ENST00000360299 PVRIGQ6DKI7 326 aa5.8□□□□□ -1.48
RAB5B-201ENST00000360299 LINC00305Q7Z4B0 112 aa5.8□□□□□ -1.48
RAB5B-201ENST00000360299 CLDND2Q8NHS1 167 aa5.8□□□□□ -1.48
RAB5B-201ENST00000360299 LIME1Q9H400 295 aa5.8□□□□□ -1.48
RAB5B-201ENST00000360299 FBXL7Q9UJT9 491 aa5.8□□□□□ -1.48
RAB5B-201ENST00000360299 HSPB8Q9UJY1 196 aa5.8□□□□□ -1.48
RAB5B-201ENST00000360299 UFC1Q9Y3C8 167 aa5.8□□□□□ -1.48
RAB5B-201ENST00000360299 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.79□□□□□ -1.48
RAB5B-201ENST00000360299 A8MXK9 166 aa5.79□□□□□ -1.48
RAB5B-201ENST00000360299 H0YIZ8 118 aa5.79□□□□□ -1.48
RAB5B-201ENST00000360299 DKK1O94907 266 aa5.79□□□□□ -1.48
RAB5B-201ENST00000360299 TRGV3P03979 118 aa5.79□□□□□ -1.48
RAB5B-201ENST00000360299 REG1AP05451 166 aa5.79□□□□□ -1.48
RAB5B-201ENST00000360299 SMIM6P0DI80 62 aa5.79□□□□□ -1.48
RAB5B-201ENST00000360299 HTN1P15515 57 aa5.79□□□□□ -1.48
RAB5B-201ENST00000360299 TAS2R60P59551 318 aa5.79□□□□□ -1.48
RAB5B-201ENST00000360299 CD177Q8N6Q3 437 aa5.79□□□□□ -1.48
RAB5B-201ENST00000360299 ZNF738Q8NE65 137 aa5.79□□□□□ -1.48
RAB5B-201ENST00000360299 SRSF12Q8WXF0 261 aaKnown RBP5.79□□□□□ -1.48
RAB5B-201ENST00000360299 GPR82Q96P67 336 aa5.79□□□□□ -1.48
RAB5B-201ENST00000360299 HS3ST6Q96QI5 342 aa5.79□□□□□ -1.48
RAB5B-201ENST00000360299 MBNL3Q9NUK0 354 aaKnown RBP5.79□□□□□ -1.48
RAB5B-201ENST00000360299 WDR83OSQ9Y284 106 aa5.79□□□□□ -1.48
RAB5B-201ENST00000360299 C5orf63A6NC05 138 aa5.79□□□□□ -1.48
RAB5B-201ENST00000360299 CRYBB3P26998 211 aa5.79□□□□□ -1.48
RAB5B-201ENST00000360299 SUPT4H1P63272 117 aaKnown RBP5.79□□□□□ -1.48
RAB5B-201ENST00000360299 CD69Q07108 199 aa5.79□□□□□ -1.48
RAB5B-201ENST00000360299 Q8TCH9 128 aa5.79□□□□□ -1.48
RAB5B-201ENST00000360299 FOXA2Q9Y261 457 aaPredicted RBP5.79□□□□□ -1.48
RAB5B-201ENST00000360299 M0R2Z0 102 aa5.79□□□□□ -1.48
RAB5B-201ENST00000360299 MLNRO43193 412 aa5.79□□□□□ -1.48
RAB5B-201ENST00000360299 OR5AL1P0C617 328 aa5.79□□□□□ -1.48
RAB5B-201ENST00000360299 IGHV1-8P0DP01 117 aa5.79□□□□□ -1.48
RAB5B-201ENST00000360299 HGFACQ04756 655 aa5.79□□□□□ -1.48
RAB5B-201ENST00000360299 VMO1Q7Z5L0 202 aa5.79□□□□□ -1.48
RAB5B-201ENST00000360299 RNF114Q9Y508 228 aa5.79□□□□□ -1.48
RAB5B-201ENST00000360299 INAFM1C9JVW0 142 aa5.79□□□□□ -1.48
RAB5B-201ENST00000360299 CD24P25063 80 aa5.79□□□□□ -1.48
RAB5B-201ENST00000360299 TMEM249Q2WGJ8 235 aa5.79□□□□□ -1.48
RAB5B-201ENST00000360299 NMSQ5H8A3 153 aa5.79□□□□□ -1.48
RAB5B-201ENST00000360299 ANAPC10Q9UM13 185 aa5.79□□□□□ -1.48
RAB5B-201ENST00000360299 MUC3AQ02505 3323 aa5.79□□□□□ -1.48
RAB5B-201ENST00000360299 EPG5Q9HCE0 2579 aa5.79□□□□□ -1.48
RAB5B-201ENST00000360299 H3BUX3 64 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 FGF16O43320 207 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 OR2J3O76001 311 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 IGLV1-44P01699 117 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 IGFBP2P18065 325 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 SYT8Q8NBV8 401 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 WFDC11Q8NEX6 87 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 RARRES2Q99969 163 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 MAP1LC3CQ9BXW4 147 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 WNT10AQ9GZT5 417 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 TRAV9-1A0A075B6T8 112 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 FHITP49789 147 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 SNRPD3P62318 126 aaKnown RBP5.78□□□□□ -1.48
RAB5B-201ENST00000360299 TMEM200BQ69YZ2 307 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 DGAT2L7PQ6IED9 249 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 ZNF343Q6P1L6 599 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 SLC25A48Q6ZT89 311 aaKnown RBP5.78□□□□□ -1.48
RAB5B-201ENST00000360299 TMEM219Q86XT9 240 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 IGHV4-30-2A0A087WSY4 118 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 GCGP01275 180 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 IGLV3-1P01715 115 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 KLRD1Q13241 179 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 C2orf83Q53S99 150 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 TMEM116Q8NCL8 245 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 TP53BP1Q12888 1972 aaPredicted RBP5.78□□□□□ -1.48
RAB5B-201ENST00000360299 IGHV2-26A0A0B4J1V2 119 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 RRHO14718 337 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 SRP19P09132 144 aaKnown RBP5.78□□□□□ -1.48
RAB5B-201ENST00000360299 ZNF137PP52743 207 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 TMEM167AQ8TBQ9 72 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 MBD3L1Q8WWY6 194 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 GAFA1Q96PS6 74 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.78□□□□□ -1.481e-6■■■□□ 19.2
RAB5B-201ENST00000360299 A0A087WWC5 75 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 RAMP3O60896 148 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 GATA3P23771 443 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 HNRNPA3P51991 378 aaKnown RBP5.78□□□□□ -1.48
RAB5B-201ENST00000360299 SMUG1Q53HV7 270 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 RUSC1-AS1Q66K80 236 aa5.78□□□□□ -1.48
RAB5B-201ENST00000360299 ZMAT5Q9UDW3 170 aaKnown RBP5.78□□□□□ -1.48
RAB5B-201ENST00000360299 IGKV1D-17A0A075B6S4 117 aa5.77□□□□□ -1.49
RAB5B-201ENST00000360299 IGHV3OR16-12A0A075B7B8 117 aa5.77□□□□□ -1.49
RAB5B-201ENST00000360299 A0A1W2PRE2 83 aa5.77□□□□□ -1.49
RAB5B-201ENST00000360299 PRSS1P07477 247 aa5.77□□□□□ -1.49
RAB5B-201ENST00000360299 OR1P1Q8NH06 330 aa5.77□□□□□ -1.49
RAB5B-201ENST00000360299 ZNF524Q96C55 264 aa5.77□□□□□ -1.49
RAB5B-201ENST00000360299 COQ2Q96H96 371 aa5.77□□□□□ -1.49
RAB5B-201ENST00000360299 SFRP2Q96HF1 295 aa5.77□□□□□ -1.49
RAB5B-201ENST00000360299 PACRGQ96M98 296 aaPredicted RBP5.77□□□□□ -1.49
RAB5B-201ENST00000360299 SRSF8Q9BRL6 282 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms