RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 OR5A1Q8NGJ0 315 aa8.17□□□□□ -1.1
CUX1-203ENST00000360264 YPEL1O60688 119 aa8.17□□□□□ -1.1
CUX1-203ENST00000360264 EIF4EBP2Q13542 120 aaPredicted RBP8.17□□□□□ -1.1
CUX1-203ENST00000360264 APCDD1LQ8NCL9 501 aa8.17□□□□□ -1.1
CUX1-203ENST00000360264 YPEL2Q96QA6 119 aa8.17□□□□□ -1.1
CUX1-203ENST00000360264 IMMP2LQ96T52 175 aa8.17□□□□□ -1.1
CUX1-203ENST00000360264 SMIM10L1P0DMW3 83 aa8.17□□□□□ -1.1
CUX1-203ENST00000360264 SMIM10Q96HG1 83 aa8.17□□□□□ -1.1
CUX1-203ENST00000360264 OVOL2Q9BRP0 275 aa8.17□□□□□ -1.1
CUX1-203ENST00000360264 NBR2O15453 112 aa8.17□□□□□ -1.1
CUX1-203ENST00000360264 SPSB3Q6PJ21 355 aa8.17□□□□□ -1.1
CUX1-203ENST00000360264 TMEM91Q6ZNR0 172 aa8.17□□□□□ -1.1
CUX1-203ENST00000360264 HAPLN4Q86UW8 402 aa8.17□□□□□ -1.1
CUX1-203ENST00000360264 TTC9CQ8N5M4 171 aa8.17□□□□□ -1.1
CUX1-203ENST00000360264 CLEC19AQ6UXS0 136 aa8.17□□□□□ -1.1
CUX1-203ENST00000360264 FOXC2Q99958 501 aa8.17□□□□□ -1.1
CUX1-203ENST00000360264 OTX1P32242 354 aaPredicted RBP8.17□□□□□ -1.1
CUX1-203ENST00000360264 S100A7L2Q5SY68 101 aa8.17□□□□□ -1.1
CUX1-203ENST00000360264 FAM71F2Q6NXP2 309 aa8.17□□□□□ -1.1
CUX1-203ENST00000360264 PRADC1Q9BSG0 188 aa8.17□□□□□ -1.1
CUX1-203ENST00000360264 TGFAP01135 160 aa8.17□□□□□ -1.1
CUX1-203ENST00000360264 SEC11AP67812 179 aa8.17□□□□□ -1.1
CUX1-203ENST00000360264 TMEM52Q8NDY8 209 aa8.17□□□□□ -1.1
CUX1-203ENST00000360264 F8WEM9 126 aa8.16□□□□□ -1.1
CUX1-203ENST00000360264 RPL39P5Q59GN2 51 aa8.16□□□□□ -1.1
CUX1-203ENST00000360264 CYSLTR1Q9Y271 337 aa8.16□□□□□ -1.1
CUX1-203ENST00000360264 SIRT4Q9Y6E7 314 aaPredicted RBP8.16□□□□□ -1.1
CUX1-203ENST00000360264 TRGV4A0A0C4DH28 118 aa8.16□□□□□ -1.1
CUX1-203ENST00000360264 C8orf46Q8TAG6 207 aa8.16□□□□□ -1.1
CUX1-203ENST00000360264 FAM90A9PA6NNJ1 464 aa8.16□□□□□ -1.1
CUX1-203ENST00000360264 PAX2Q02962 417 aa8.16□□□□□ -1.1
CUX1-203ENST00000360264 A0A087WWC5 75 aa8.16□□□□□ -1.1
CUX1-203ENST00000360264 ZNF257Q9Y2Q1 563 aa8.16□□□□□ -1.1
CUX1-203ENST00000360264 ARL6IP6Q8N6S5 226 aa8.16□□□□□ -1.1
CUX1-203ENST00000360264 NMBP08949 121 aa8.16□□□□□ -1.1
CUX1-203ENST00000360264 GPR183P32249 361 aa8.16□□□□□ -1.1
CUX1-203ENST00000360264 FAM166AQ6J272 317 aa8.16□□□□□ -1.1
CUX1-203ENST00000360264 TRAV21A0A0B4J279 112 aa8.16□□□□□ -1.1
CUX1-203ENST00000360264 GDF15Q99988 308 aa8.16□□□□□ -1.1
CUX1-203ENST00000360264 SRSF1Q07955 248 aaKnown RBP eCLIP8.15□□□□□ -1.1
CUX1-203ENST00000360264 OR5AN1Q8NGI8 311 aa8.15□□□□□ -1.1
CUX1-203ENST00000360264 IGHV2OR16-5A0A0B4J2B6 119 aa8.15□□□□□ -1.1
CUX1-203ENST00000360264 CHCHD2Q9Y6H1 151 aaPredicted RBP8.15□□□□□ -1.1
CUX1-203ENST00000360264 IL36BQ9NZH7 164 aa8.15□□□□□ -1.1
CUX1-203ENST00000360264 PPP1R32Q7Z5V6 425 aa8.15□□□□□ -1.1
CUX1-203ENST00000360264 USMG5Q96IX5 58 aa8.15□□□□□ -1.1
CUX1-203ENST00000360264 CSRP1P21291 193 aaKnown RBP8.15□□□□□ -1.11
CUX1-203ENST00000360264 POLQO75417 2590 aa8.15□□□□□ -1.11
CUX1-203ENST00000360264 GRIFINA4D1Z8 144 aa8.15□□□□□ -1.11
CUX1-203ENST00000360264 NDUFA3O95167 84 aa8.15□□□□□ -1.11
CUX1-203ENST00000360264 TNFRSF14Q92956 283 aa8.15□□□□□ -1.11
CUX1-203ENST00000360264 ASPHD2Q6ICH7 369 aa8.14□□□□□ -1.11
CUX1-203ENST00000360264 IGHV3-66A0A0C4DH42 116 aa8.14□□□□□ -1.11
CUX1-203ENST00000360264 METRNQ9UJH8 293 aa8.14□□□□□ -1.11
CUX1-203ENST00000360264 IGLV3-19P01714 112 aa8.14□□□□□ -1.11
CUX1-203ENST00000360264 CBLN1P23435 193 aa8.14□□□□□ -1.11
CUX1-203ENST00000360264 SPCS1Q9Y6A9 102 aa8.14□□□□□ -1.11
CUX1-203ENST00000360264 IGHV3OR16-13A0A075B7E8 117 aa8.14□□□□□ -1.11
CUX1-203ENST00000360264 IGHV3-74A0A0B4J1X5 117 aa8.14□□□□□ -1.11
CUX1-203ENST00000360264 F12P00748 615 aaPredicted RBP8.14□□□□□ -1.11
CUX1-203ENST00000360264 COLCA1Q6ZS62 124 aa8.14□□□□□ -1.11
CUX1-203ENST00000360264 REPIN1Q9BWE0 567 aaKnown RBP8.14□□□□□ -1.11
CUX1-203ENST00000360264 C17orf100A8MU93 164 aa8.14□□□□□ -1.11
CUX1-203ENST00000360264 THSD7AQ9UPZ6 1657 aa8.14□□□□□ -1.11
CUX1-203ENST00000360264 UCP1P25874 307 aa8.14□□□□□ -1.11
CUX1-203ENST00000360264 FHITP49789 147 aa8.14□□□□□ -1.11
CUX1-203ENST00000360264 CEP192Q8TEP8 1941 aa8.14□□□□□ -1.11
CUX1-203ENST00000360264 TMEM144Q7Z5S9 345 aa8.14□□□□□ -1.11
CUX1-203ENST00000360264 WISP3O95389 354 aaPredicted RBP8.14□□□□□ -1.11
CUX1-203ENST00000360264 IGFBP2P18065 325 aa8.14□□□□□ -1.11
CUX1-203ENST00000360264 GGTLC3B5MD39 225 aa8.14□□□□□ -1.11
CUX1-203ENST00000360264 EGR1P18146 543 aa8.14□□□□□ -1.11
CUX1-203ENST00000360264 OR9G4Q8NGQ1 327 aa8.14□□□□□ -1.11
CUX1-203ENST00000360264 TRAV8-2A0A0B4J237 113 aa8.14□□□□□ -1.11
CUX1-203ENST00000360264 F2Z2F3 143 aa8.14□□□□□ -1.11
CUX1-203ENST00000360264 LINC00271P0C7V0 271 aa8.14□□□□□ -1.11
CUX1-203ENST00000360264 FASNP49327 2511 aaKnown RBP8.14□□□□□ -1.11
CUX1-203ENST00000360264 C12orf77C9JDV5 145 aa8.14□□□□□ -1.11
CUX1-203ENST00000360264 IGKV1D-42A0A075B6H8 117 aa8.13□□□□□ -1.11
CUX1-203ENST00000360264 ADARB2-AS1A8MUL3 147 aa8.13□□□□□ -1.11
CUX1-203ENST00000360264 WNT2P09544 360 aa8.13□□□□□ -1.11
CUX1-203ENST00000360264 CFHR1Q03591 330 aa8.13□□□□□ -1.11
CUX1-203ENST00000360264 SRSF7Q16629 238 aaKnown RBP eCLIP8.13□□□□□ -1.111e-8■■■■■ 28.4
CUX1-203ENST00000360264 PLAC1Q9HBJ0 212 aa8.13□□□□□ -1.11
CUX1-203ENST00000360264 ZNF324BQ6AW86 544 aaPredicted RBP8.13□□□□□ -1.11
CUX1-203ENST00000360264 PUSL1Q8N0Z8 303 aaKnown RBP8.13□□□□□ -1.11
CUX1-203ENST00000360264 A0A1W2PR77 199 aa8.13□□□□□ -1.11
CUX1-203ENST00000360264 C15orf61A6NNL5 157 aa8.13□□□□□ -1.11
CUX1-203ENST00000360264 CKS1BP61024 79 aa8.13□□□□□ -1.11
CUX1-203ENST00000360264 PAX8Q06710 450 aa8.13□□□□□ -1.11
CUX1-203ENST00000360264 TMEM238C9JI98 176 aa8.13□□□□□ -1.11
CUX1-203ENST00000360264 ATXN8Q156A1 80 aa8.13□□□□□ -1.11
CUX1-203ENST00000360264 A0A0G2JK05 382 aa8.13□□□□□ -1.11
CUX1-203ENST00000360264 LGALS1P09382 135 aaKnown RBP8.13□□□□□ -1.11
CUX1-203ENST00000360264 MS4A6AQ9H2W1 248 aa8.13□□□□□ -1.11
CUX1-203ENST00000360264 ZP1P60852 638 aa8.13□□□□□ -1.11
CUX1-203ENST00000360264 SPSB2Q99619 263 aa8.13□□□□□ -1.11
CUX1-203ENST00000360264 CD28P10747 220 aa8.13□□□□□ -1.11
CUX1-203ENST00000360264 C20orf204Q6ZNR8 217 aa8.13□□□□□ -1.11
CUX1-203ENST00000360264 SLC25A28Q96A46 364 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms