RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 GNG5P63218 68 aa10.78□□□□□ -0.68
NLRC3-202ENST00000359128 C11orf68Q9H3H3 251 aaKnown RBP10.78□□□□□ -0.68
NLRC3-202ENST00000359128 SMIM13P0DJ93 91 aa10.78□□□□□ -0.68
NLRC3-202ENST00000359128 FLVCR1-AS1Q8TAF5 88 aa10.78□□□□□ -0.68
NLRC3-202ENST00000359128 FBLIM1Q8WUP2 373 aa10.78□□□□□ -0.68
NLRC3-202ENST00000359128 ASCC3Q8N3C0 2202 aaKnown RBP10.77□□□□□ -0.68
NLRC3-202ENST00000359128 MYOFQ9NZM1 2061 aa10.77□□□□□ -0.68
NLRC3-202ENST00000359128 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.77□□□□□ -0.68
NLRC3-202ENST00000359128 IGHV1-8P0DP01 117 aa10.77□□□□□ -0.68
NLRC3-202ENST00000359128 NAT1P18440 290 aa10.77□□□□□ -0.69
NLRC3-202ENST00000359128 FAM131CQ96AQ9 280 aa10.77□□□□□ -0.69
NLRC3-202ENST00000359128 MRPL16Q9NX20 251 aaKnown RBP10.77□□□□□ -0.69
NLRC3-202ENST00000359128 PIKFYVEQ9Y2I7 2098 aa10.77□□□□□ -0.69
NLRC3-202ENST00000359128 PLP1P60201 277 aa10.77□□□□□ -0.69
NLRC3-202ENST00000359128 PIP4P2Q8N4L2 257 aa10.77□□□□□ -0.69
NLRC3-202ENST00000359128 FOXA3P55318 350 aaPredicted RBP10.77□□□□□ -0.69
NLRC3-202ENST00000359128 MBNL3Q9NUK0 354 aaKnown RBP10.77□□□□□ -0.69
NLRC3-202ENST00000359128 UQCR10Q9UDW1 63 aa10.77□□□□□ -0.69
NLRC3-202ENST00000359128 VENTXO95231 258 aa10.77□□□□□ -0.69
NLRC3-202ENST00000359128 CD28P10747 220 aa10.77□□□□□ -0.69
NLRC3-202ENST00000359128 SLC25A15Q9Y619 301 aa10.77□□□□□ -0.69
NLRC3-202ENST00000359128 A0A087WX48 190 aa10.76□□□□□ -0.69
NLRC3-202ENST00000359128 TRBV7-1A0A0A6YYK4 115 aa10.76□□□□□ -0.69
NLRC3-202ENST00000359128 TMEM144Q7Z5S9 345 aa10.76□□□□□ -0.69
NLRC3-202ENST00000359128 THADAQ6YHU6 1953 aa10.76□□□□□ -0.69
NLRC3-202ENST00000359128 IGHV1-3A0A0C4DH29 117 aa10.76□□□□□ -0.69
NLRC3-202ENST00000359128 FHITP49789 147 aa10.76□□□□□ -0.69
NLRC3-202ENST00000359128 ORMDL3Q8N138 153 aa10.76□□□□□ -0.69
NLRC3-202ENST00000359128 PRR32B1ATL7 298 aa10.76□□□□□ -0.69
NLRC3-202ENST00000359128 K7ENP7 123 aa10.76□□□□□ -0.69
NLRC3-202ENST00000359128 NDUFS8O00217 210 aa10.76□□□□□ -0.69
NLRC3-202ENST00000359128 CDK2AP2O75956 126 aa10.76□□□□□ -0.69
NLRC3-202ENST00000359128 ZNF250P15622 560 aa10.76□□□□□ -0.69
NLRC3-202ENST00000359128 COTL1Q14019 142 aa10.76□□□□□ -0.69
NLRC3-202ENST00000359128 C15orf32Q32M92 178 aa10.76□□□□□ -0.69
NLRC3-202ENST00000359128 ATOH7Q8N100 152 aa10.76□□□□□ -0.69
NLRC3-202ENST00000359128 ZNF525Q8N782 197 aa10.76□□□□□ -0.69
NLRC3-202ENST00000359128 TBL2Q9Y4P3 447 aaKnown RBP10.76□□□□□ -0.69
NLRC3-202ENST00000359128 OOSP1A8MZH6 123 aa10.76□□□□□ -0.69
NLRC3-202ENST00000359128 RAMP3O60896 148 aa10.76□□□□□ -0.69
NLRC3-202ENST00000359128 FXYD7P58549 80 aa10.76□□□□□ -0.69
NLRC3-202ENST00000359128 GGNQ86UU5 652 aa10.76□□□□□ -0.69
NLRC3-202ENST00000359128 SCN8AQ9UQD0 1980 aa10.76□□□□□ -0.69
NLRC3-202ENST00000359128 NUP214P35658 2090 aaPredicted RBP10.76□□□□□ -0.69
NLRC3-202ENST00000359128 CXorf65A6NEN9 183 aa10.76□□□□□ -0.69
NLRC3-202ENST00000359128 BMPERQ8N8U9 685 aa10.76□□□□□ -0.69
NLRC3-202ENST00000359128 RCC1LQ96I51 464 aaKnown RBP10.76□□□□□ -0.69
NLRC3-202ENST00000359128 SLC17A3O00476 420 aa10.75□□□□□ -0.69
NLRC3-202ENST00000359128 CBLN1P23435 193 aa10.75□□□□□ -0.69
NLRC3-202ENST00000359128 H2BFSP57053 126 aa10.75□□□□□ -0.69
NLRC3-202ENST00000359128 ACTL10Q5JWF8 245 aa10.75□□□□□ -0.69
NLRC3-202ENST00000359128 RTBDNQ9BSG5 229 aaPredicted RBP10.75□□□□□ -0.69
NLRC3-202ENST00000359128 MAP1BP46821 2468 aaKnown RBP10.75□□□□□ -0.69
NLRC3-202ENST00000359128 C1QTNF9BB2RNN3 333 aa10.75□□□□□ -0.69
NLRC3-202ENST00000359128 ATP5G3P48201 142 aa10.75□□□□□ -0.69
NLRC3-202ENST00000359128 TDGF1P3P51864 188 aa10.75□□□□□ -0.69
NLRC3-202ENST00000359128 CKS1BP61024 79 aa10.75□□□□□ -0.69
NLRC3-202ENST00000359128 ZNF506Q5JVG8 444 aa10.75□□□□□ -0.69
NLRC3-202ENST00000359128 FGFBP3Q8TAT2 258 aa10.75□□□□□ -0.69
NLRC3-202ENST00000359128 E9PQ18 207 aa10.75□□□□□ -0.69
NLRC3-202ENST00000359128 PRCDQ00LT1 54 aa10.75□□□□□ -0.69
NLRC3-202ENST00000359128 FAM89BQ8N5H3 189 aa10.75□□□□□ -0.69
NLRC3-202ENST00000359128 GTF3AQ92664 365 aaKnown RBP10.75□□□□□ -0.69
NLRC3-202ENST00000359128 NINQ8N4C6 2090 aa10.74□□□□□ -0.69
NLRC3-202ENST00000359128 TCF21O43680 179 aa10.74□□□□□ -0.69
NLRC3-202ENST00000359128 MDS2Q8NDY4 140 aa10.74□□□□□ -0.69
NLRC3-202ENST00000359128 BPESC1Q9GZL8 116 aa10.74□□□□□ -0.69
NLRC3-202ENST00000359128 A0A1B0GTI1 187 aa10.74□□□□□ -0.69
NLRC3-202ENST00000359128 IZUMO1RA6ND01 250 aa10.74□□□□□ -0.69
NLRC3-202ENST00000359128 EFNB1P98172 346 aa10.74□□□□□ -0.69
NLRC3-202ENST00000359128 DOCK3Q8IZD9 2030 aa10.74□□□□□ -0.69
NLRC3-202ENST00000359128 C18orf12Q96KH6 178 aa10.74□□□□□ -0.69
NLRC3-202ENST00000359128 C1QTNF4Q9BXJ3 329 aa10.74□□□□□ -0.69
NLRC3-202ENST00000359128 TRGV1A0A0A0MS02 117 aa10.74□□□□□ -0.69
NLRC3-202ENST00000359128 FAM223BA6NKX1 122 aa10.74□□□□□ -0.69
NLRC3-202ENST00000359128 C1QTNF9P0C862 333 aa10.74□□□□□ -0.69
NLRC3-202ENST00000359128 TTC32Q5I0X7 151 aa10.74□□□□□ -0.69
NLRC3-202ENST00000359128 FAM223AQ8IWN6 122 aa10.74□□□□□ -0.69
NLRC3-202ENST00000359128 SEPSECSQ9HD40 501 aaKnown RBP10.74□□□□□ -0.69
NLRC3-202ENST00000359128 SPSB3Q6PJ21 355 aa10.73□□□□□ -0.69
NLRC3-202ENST00000359128 SCN5AQ14524 2016 aa10.73□□□□□ -0.69
NLRC3-202ENST00000359128 RIPPLY3P57055 190 aa10.73□□□□□ -0.69
NLRC3-202ENST00000359128 SRSF1Q07955 248 aaKnown RBP eCLIP10.73□□□□□ -0.69
NLRC3-202ENST00000359128 USMG5Q96IX5 58 aa10.73□□□□□ -0.69
NLRC3-202ENST00000359128 MBD3L4A6NDZ8 208 aaPredicted RBP10.73□□□□□ -0.69
NLRC3-202ENST00000359128 MBD3L3A6NE82 208 aaPredicted RBP10.73□□□□□ -0.69
NLRC3-202ENST00000359128 MBD3L5A6NJ08 208 aaPredicted RBP10.73□□□□□ -0.69
NLRC3-202ENST00000359128 FAM90A9PA6NNJ1 464 aa10.73□□□□□ -0.69
NLRC3-202ENST00000359128 IGFBP3P17936 291 aaPredicted RBP10.73□□□□□ -0.69
NLRC3-202ENST00000359128 MBD3L2Q8NHZ7 208 aaPredicted RBP10.73□□□□□ -0.69
NLRC3-202ENST00000359128 SDHCQ99643 169 aaPredicted RBP10.73□□□□□ -0.69
NLRC3-202ENST00000359128 SBF1O95248 1867 aa10.73□□□□□ -0.69
NLRC3-202ENST00000359128 IGHV3-73A0A0B4J1V6 119 aa10.73□□□□□ -0.69
NLRC3-202ENST00000359128 S100A7L2Q5SY68 101 aa10.73□□□□□ -0.69
NLRC3-202ENST00000359128 EPDR1Q9UM22 224 aa10.73□□□□□ -0.69
NLRC3-202ENST00000359128 PSG8Q9UQ74 426 aa10.73□□□□□ -0.69
NLRC3-202ENST00000359128 Q6ZS92 163 aa10.73□□□□□ -0.69
NLRC3-202ENST00000359128 COL8A2P25067 703 aa10.72□□□□□ -0.69
NLRC3-202ENST00000359128 DUTP33316 252 aaKnown RBP10.72□□□□□ -0.69
NLRC3-202ENST00000359128 Q71RC1 249 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms