RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 CRYBB3P26998 211 aa3.3□□□□□ -1.88
CNGA1-201ENST00000358519 SLC35B1P78383 322 aa3.3□□□□□ -1.88
CNGA1-201ENST00000358519 MEF2CQ06413 473 aaPredicted RBP3.3□□□□□ -1.88
CNGA1-201ENST00000358519 SLC38A11Q08AI6 406 aa3.3□□□□□ -1.88
CNGA1-201ENST00000358519 PRAMEF5Q5TYX0 476 aa3.3□□□□□ -1.88
CNGA1-201ENST00000358519 PRAMEF6Q5VXH4 476 aa3.3□□□□□ -1.88
CNGA1-201ENST00000358519 Q6ZT83 130 aa3.3□□□□□ -1.88
CNGA1-201ENST00000358519 PRR22Q8IZ63 422 aa3.3□□□□□ -1.88
CNGA1-201ENST00000358519 TMEM251Q8N6I4 163 aa3.3□□□□□ -1.88
CNGA1-201ENST00000358519 KIR3DL3Q8N743 410 aa3.3□□□□□ -1.88
CNGA1-201ENST00000358519 OR5A2Q8NGI9 324 aa3.3□□□□□ -1.88
CNGA1-201ENST00000358519 OR5D13Q8NGL4 314 aa3.3□□□□□ -1.88
CNGA1-201ENST00000358519 OR2K2Q8NGT1 345 aa3.3□□□□□ -1.88
CNGA1-201ENST00000358519 RDH5Q92781 318 aa3.3□□□□□ -1.88
CNGA1-201ENST00000358519 EAF1Q96JC9 268 aaPredicted RBP3.3□□□□□ -1.88
CNGA1-201ENST00000358519 JMJD8Q96S16 334 aa3.3□□□□□ -1.88
CNGA1-201ENST00000358519 OR2H1Q9GZK4 316 aa3.3□□□□□ -1.88
CNGA1-201ENST00000358519 GEMIN7Q9H840 131 aaKnown RBP3.3□□□□□ -1.88
CNGA1-201ENST00000358519 NGBQ9NPG2 151 aa3.3□□□□□ -1.88
CNGA1-201ENST00000358519 KCNIP2Q9NS61 270 aa3.3□□□□□ -1.88
CNGA1-201ENST00000358519 JKAMPQ9P055 326 aa3.3□□□□□ -1.88
CNGA1-201ENST00000358519 IGKV1D-13A0A0B4J2D9 117 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 NPIPB11E5RHQ5 1161 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 F2RL2O00254 374 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 RER1O15258 196 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 CLDN1O95832 211 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 IGKV1-13P0DP09 117 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 GPR183P32249 361 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 CFHR2P36980 270 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 UQCRFS1P47985 274 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 CX3CL1P78423 397 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 HIST1H1AQ02539 215 aaPredicted RBP3.29□□□□□ -1.88
CNGA1-201ENST00000358519 RAB31Q13636 194 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 PDCD1Q15116 288 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 TBC1D28Q2M2D7 210 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 CEACAM21Q3KPI0 293 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 TCTEX1D4Q5JR98 221 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 MBNL2Q5VZF2 373 aaKnown RBP3.29□□□□□ -1.88
CNGA1-201ENST00000358519 MRPL54Q6P161 138 aaKnown RBP3.29□□□□□ -1.88
CNGA1-201ENST00000358519 C18orf32Q8TCD1 76 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 PERPQ96FX8 193 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 LYZL4Q96KX0 146 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 NAA38Q9BRA0 125 aaKnown RBP3.29□□□□□ -1.88
CNGA1-201ENST00000358519 TMEM204Q9BSN7 226 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 TMEM70Q9BUB7 260 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 EMC6Q9BV81 110 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 CCL28Q9NRJ3 127 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 CACNG5Q9UF02 275 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 POLDIP2Q9Y2S7 368 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 TSSC4Q9Y5U2 329 aaPredicted RBP3.29□□□□□ -1.88
CNGA1-201ENST00000358519 UTP20O75691 2785 aaKnown RBP3.29□□□□□ -1.88
CNGA1-201ENST00000358519 H0Y980 276 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 OVOL3O00110 214 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 HLA-DRB1P01911 266 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 SLC25A6P12236 298 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 CDAP32320 146 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 GPM6AP51674 278 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 SEC11AP67812 179 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 FOXE3Q13461 319 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 PIGYQ3MUY2 71 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 TMEM177Q53S58 311 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 C9orf135Q5VTT2 229 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 FAM214BQ7L5A3 538 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 NUP37Q8NFH4 326 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 OR10AG1Q8NH19 301 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 OR1L1Q8NH94 360 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 OR2T6Q8NHC8 308 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 FAM57AQ8TBR7 257 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 BLNKQ8WV28 456 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 MRAP2Q96G30 205 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 SCRT2Q9NQ03 307 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 PIGLQ9Y2B2 252 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 V9GYV3 84 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 NCOA6Q14686 2063 aaPredicted RBP3.29□□□□□ -1.88
CNGA1-201ENST00000358519 MED13Q9UHV7 2174 aa3.29□□□□□ -1.88
CNGA1-201ENST00000358519 MED12LQ86YW9 2145 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 CENPEQ02224 2701 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 A0A0G2JLM5 398 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 PSMB11A5LHX3 300 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 TMEM189A5PLL7 270 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 CD300LBA8K4G0 201 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 H3BRM9 83 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 M0R135 149 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 CRXO43186 299 aaPredicted RBP3.28□□□□□ -1.88
CNGA1-201ENST00000358519 ZNF207O43670 478 aaKnown RBP3.28□□□□□ -1.88
CNGA1-201ENST00000358519 PGLYRP1O75594 196 aaPredicted RBP3.28□□□□□ -1.88
CNGA1-201ENST00000358519 TSPAN13O95857 204 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 IGLV1-44P01699 117 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 HLA-DQA1P01909 254 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 APOA2P02652 100 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 APCSP02743 223 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 MED14OSP0DP75 135 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 PSG2P11465 335 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 USF1P22415 310 aaPredicted RBP3.28□□□□□ -1.88
CNGA1-201ENST00000358519 F2RP25116 425 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 HTR1DP28221 377 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 FABP6P51161 128 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 COX19Q49B96 90 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 TMEM97Q5BJF2 176 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 TIMM23BQ5SRD1 257 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms