RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 NDUFA11Q86Y39 141 aa11.5□□□□□ -0.57
CCNE1-202ENST00000357943 CMYA5Q8N3K9 4069 aa11.5□□□□□ -0.57
CCNE1-202ENST00000357943 FXYD6-FXYD2A0A087WZ82 144 aa11.49□□□□□ -0.57
CCNE1-202ENST00000357943 NUDT19A8MXV4 375 aa11.49□□□□□ -0.57
CCNE1-202ENST00000357943 METTL15P1P0C7V9 234 aa11.49□□□□□ -0.57
CCNE1-202ENST00000357943 CAV2P51636 162 aa11.49□□□□□ -0.57
CCNE1-202ENST00000357943 EXOSC2Q13868 293 aaKnown RBP11.49□□□□□ -0.57
CCNE1-202ENST00000357943 DEFB136Q30KP8 78 aa11.49□□□□□ -0.57
CCNE1-202ENST00000357943 ZNF343Q6P1L6 599 aa11.49□□□□□ -0.57
CCNE1-202ENST00000357943 TMEM14EPQ6UXP3 125 aa11.49□□□□□ -0.57
CCNE1-202ENST00000357943 ETV3LQ6ZN32 361 aa11.49□□□□□ -0.57
CCNE1-202ENST00000357943 RNASEH2CQ8TDP1 164 aaKnown RBP11.49□□□□□ -0.57
CCNE1-202ENST00000357943 C4orf3Q8WVX3 66 aa11.49□□□□□ -0.57
CCNE1-202ENST00000357943 CXorf58Q96LI9 332 aa11.49□□□□□ -0.57
CCNE1-202ENST00000357943 CCDC140Q96MF4 163 aa11.49□□□□□ -0.57
CCNE1-202ENST00000357943 HSPB11Q9Y547 144 aa11.49□□□□□ -0.57
CCNE1-202ENST00000357943 FAM24AA6NFZ4 105 aa11.49□□□□□ -0.57
CCNE1-202ENST00000357943 PMS2P5A8MQ11 134 aa11.49□□□□□ -0.57
CCNE1-202ENST00000357943 E5RGE8 158 aa11.49□□□□□ -0.57
CCNE1-202ENST00000357943 TRBV12-3P01733 135 aa11.49□□□□□ -0.57
CCNE1-202ENST00000357943 LGALS1P09382 135 aaKnown RBP11.49□□□□□ -0.57
CCNE1-202ENST00000357943 PRSS54Q6PEW0 395 aa11.49□□□□□ -0.57
CCNE1-202ENST00000357943 THAP6Q8TBB0 222 aa11.49□□□□□ -0.57
CCNE1-202ENST00000357943 ZNF502Q8TBZ5 544 aa11.49□□□□□ -0.57
CCNE1-202ENST00000357943 VN1R17PQ8TDU5 208 aa11.49□□□□□ -0.57
CCNE1-202ENST00000357943 EEF1AKMT3Q96AZ1 226 aa11.49□□□□□ -0.57
CCNE1-202ENST00000357943 LYRM2Q9NU23 88 aaPredicted RBP11.49□□□□□ -0.57
CCNE1-202ENST00000357943 MRPL36Q9P0J6 103 aaKnown RBP11.49□□□□□ -0.57
CCNE1-202ENST00000357943 MBD2Q9UBB5 411 aa11.49□□□□□ -0.57
CCNE1-202ENST00000357943 ANKRD34BA5PLL1 514 aa11.48□□□□□ -0.57
CCNE1-202ENST00000357943 PRSS46E5RG02 174 aa11.48□□□□□ -0.57
CCNE1-202ENST00000357943 F8W735 103 aaPredicted RBP11.48□□□□□ -0.57
CCNE1-202ENST00000357943 PET100P0DJ07 73 aa11.48□□□□□ -0.57
CCNE1-202ENST00000357943 LYL1P12980 280 aa11.48□□□□□ -0.57
CCNE1-202ENST00000357943 CXCL2P19875 107 aa11.48□□□□□ -0.57
CCNE1-202ENST00000357943 OR8G2PQ6IF36 304 aa11.48□□□□□ -0.57
CCNE1-202ENST00000357943 CLEC19AQ6UXS0 136 aa11.48□□□□□ -0.57
CCNE1-202ENST00000357943 SLC7A5P1Q8MH63 180 aa11.48□□□□□ -0.57
CCNE1-202ENST00000357943 UBAC2Q8NBM4 344 aa11.48□□□□□ -0.57
CCNE1-202ENST00000357943 DUX3Q96PT4 197 aa11.48□□□□□ -0.57
CCNE1-202ENST00000357943 C21orf62Q9NYP8 219 aa11.48□□□□□ -0.57
CCNE1-202ENST00000357943 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.47□□□□□ -0.57
CCNE1-202ENST00000357943 TRBV7-1A0A0A6YYK4 115 aa11.47□□□□□ -0.57
CCNE1-202ENST00000357943 IGSF23A1L1A6 192 aa11.47□□□□□ -0.57
CCNE1-202ENST00000357943 ARPC5O15511 151 aa11.47□□□□□ -0.57
CCNE1-202ENST00000357943 CLEC3BP05452 202 aa11.47□□□□□ -0.57
CCNE1-202ENST00000357943 RUNX1Q01196 453 aa11.47□□□□□ -0.57
CCNE1-202ENST00000357943 CD69Q07108 199 aa11.47□□□□□ -0.57
CCNE1-202ENST00000357943 ARL16Q0P5N6 197 aa11.47□□□□□ -0.57
CCNE1-202ENST00000357943 ZNF546Q86UE3 836 aa11.47□□□□□ -0.57
CCNE1-202ENST00000357943 HAPLN4Q86UW8 402 aa11.47□□□□□ -0.57
CCNE1-202ENST00000357943 TMEM252Q8N6L7 170 aa11.47□□□□□ -0.57
CCNE1-202ENST00000357943 OR11H1Q8NG94 326 aa11.47□□□□□ -0.57
CCNE1-202ENST00000357943 ZC4H2Q9NQZ6 224 aa11.47□□□□□ -0.57
CCNE1-202ENST00000357943 TNFSF18Q9UNG2 199 aa11.47□□□□□ -0.57
CCNE1-202ENST00000357943 PPP5D1E7EU14 171 aa11.46□□□□□ -0.57
CCNE1-202ENST00000357943 CST7O76096 145 aa11.46□□□□□ -0.57
CCNE1-202ENST00000357943 GPR183P32249 361 aa11.46□□□□□ -0.57
CCNE1-202ENST00000357943 P2RY1P47900 373 aa11.46□□□□□ -0.57
CCNE1-202ENST00000357943 ACSM6Q6P461 480 aa11.46□□□□□ -0.57
CCNE1-202ENST00000357943 DCUN1D4Q92564 292 aa11.46□□□□□ -0.57
CCNE1-202ENST00000357943 RAX2Q96IS3 184 aa11.46□□□□□ -0.57
CCNE1-202ENST00000357943 PEF1Q9UBV8 284 aaKnown RBP11.46□□□□□ -0.57
CCNE1-202ENST00000357943 VWFP04275 2813 aa11.46□□□□□ -0.57
CCNE1-202ENST00000357943 IGHV4OR15-8A0A075B7B6 117 aa11.46□□□□□ -0.58
CCNE1-202ENST00000357943 A0A087WW49 117 aa11.46□□□□□ -0.58
CCNE1-202ENST00000357943 RPS10-NUDT3A0A1W2PQS6 291 aa11.46□□□□□ -0.58
CCNE1-202ENST00000357943 OR2T8A6NH00 312 aa11.46□□□□□ -0.58
CCNE1-202ENST00000357943 MFAP4P55083 255 aa11.46□□□□□ -0.58
CCNE1-202ENST00000357943 Q56UQ5 140 aa11.46□□□□□ -0.58
CCNE1-202ENST00000357943 ACOT7LQ6ZUV0 252 aa11.46□□□□□ -0.58
CCNE1-202ENST00000357943 SLC16A13Q7RTY0 426 aa11.46□□□□□ -0.58
CCNE1-202ENST00000357943 TMEM217Q8N7C4 229 aa11.46□□□□□ -0.58
CCNE1-202ENST00000357943 MFFQ9GZY8 342 aa11.46□□□□□ -0.58
CCNE1-202ENST00000357943 CCL24O00175 119 aa11.45□□□□□ -0.58
CCNE1-202ENST00000357943 GPX4P36969 197 aaPredicted RBP11.45□□□□□ -0.58
CCNE1-202ENST00000357943 NHLH2Q02577 135 aa11.45□□□□□ -0.58
CCNE1-202ENST00000357943 GAMTQ14353 236 aa11.45□□□□□ -0.58
CCNE1-202ENST00000357943 ETFRF1Q6IPR1 90 aa11.45□□□□□ -0.58
CCNE1-202ENST00000357943 OR10P1Q8NGE3 313 aa11.45□□□□□ -0.58
CCNE1-202ENST00000357943 OR4X1Q8NH49 305 aa11.45□□□□□ -0.58
CCNE1-202ENST00000357943 RNF222A6NCQ9 220 aa11.44□□□□□ -0.58
CCNE1-202ENST00000357943 BMPR1BO00238 502 aa11.44□□□□□ -0.58
CCNE1-202ENST00000357943 HSPB1P04792 205 aaKnown RBP11.44□□□□□ -0.58
CCNE1-202ENST00000357943 FCGR2BP31994 310 aaPredicted RBP11.44□□□□□ -0.58
CCNE1-202ENST00000357943 SULT1A1P50225 295 aa11.44□□□□□ -0.58
CCNE1-202ENST00000357943 RND2P52198 227 aa11.44□□□□□ -0.58
CCNE1-202ENST00000357943 EWSR1Q01844 656 aaKnown RBP eCLIP11.44□□□□□ -0.58
CCNE1-202ENST00000357943 ZNF767PQ75MW2 155 aa11.44□□□□□ -0.58
CCNE1-202ENST00000357943 STX12Q86Y82 276 aa11.44□□□□□ -0.58
CCNE1-202ENST00000357943 TMEM116Q8NCL8 245 aa11.44□□□□□ -0.58
CCNE1-202ENST00000357943 OR1N2Q8NGR9 330 aa11.44□□□□□ -0.58
CCNE1-202ENST00000357943 SPATA3Q8NHX4 192 aa11.44□□□□□ -0.58
CCNE1-202ENST00000357943 CACNG8Q8WXS5 425 aa11.44□□□□□ -0.58
CCNE1-202ENST00000357943 NPIPB3Q92617 1050 aa11.44□□□□□ -0.58
CCNE1-202ENST00000357943 ACY3Q96HD9 319 aa11.44□□□□□ -0.58
CCNE1-202ENST00000357943 TXN2Q99757 166 aa11.44□□□□□ -0.58
CCNE1-202ENST00000357943 CHRDL1Q9BU40 450 aa11.44□□□□□ -0.58
CCNE1-202ENST00000357943 TGOLN2O43493 480 aa11.43□□□□□ -0.58
CCNE1-202ENST00000357943 TSPAN15O95858 294 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms