RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 HIST1H2BLQ99880 126 aa12.76□□□□□ -0.37
PHTF1-201ENST00000357783 TRAV5A0A0B4J249 113 aa12.75□□□□□ -0.37
PHTF1-201ENST00000357783 APELAP0DMC3 54 aa12.75□□□□□ -0.37
PHTF1-201ENST00000357783 COX7A1P24310 79 aa12.75□□□□□ -0.37
PHTF1-201ENST00000357783 SUB1P53999 127 aaKnown RBP eCLIP12.75□□□□□ -0.37
PHTF1-201ENST00000357783 MRGPRG-AS1Q2M3A8 158 aa12.75□□□□□ -0.37
PHTF1-201ENST00000357783 REC114Q7Z4M0 266 aa12.75□□□□□ -0.37
PHTF1-201ENST00000357783 PNKDQ8N490 385 aa12.75□□□□□ -0.37
PHTF1-201ENST00000357783 RNASEH2CQ8TDP1 164 aaKnown RBP12.75□□□□□ -0.37
PHTF1-201ENST00000357783 PACRGQ96M98 296 aaPredicted RBP12.75□□□□□ -0.37
PHTF1-201ENST00000357783 SLC25A33Q9BSK2 321 aa12.75□□□□□ -0.37
PHTF1-201ENST00000357783 C19orf24Q9BVV8 132 aa12.75□□□□□ -0.37
PHTF1-201ENST00000357783 MRPL36Q9P0J6 103 aaKnown RBP12.75□□□□□ -0.37
PHTF1-201ENST00000357783 C8orf88P0DMB2 117 aa12.75□□□□□ -0.37
PHTF1-201ENST00000357783 ZNF90Q03938 601 aa12.75□□□□□ -0.37
PHTF1-201ENST00000357783 ZNF841Q6ZN19 808 aa12.75□□□□□ -0.37
PHTF1-201ENST00000357783 IMMP2LQ96T52 175 aa12.75□□□□□ -0.37
PHTF1-201ENST00000357783 GGTLC3B5MD39 225 aa12.75□□□□□ -0.37
PHTF1-201ENST00000357783 SLC17A3O00476 420 aa12.75□□□□□ -0.37
PHTF1-201ENST00000357783 LGALS7P47929 136 aa12.75□□□□□ -0.37
PHTF1-201ENST00000357783 FOXL1Q12952 345 aa12.75□□□□□ -0.37
PHTF1-201ENST00000357783 HCP5Q6MZN7 132 aa12.75□□□□□ -0.37
PHTF1-201ENST00000357783 EAF1Q96JC9 268 aaPredicted RBP12.75□□□□□ -0.37
PHTF1-201ENST00000357783 ARL2-SNX15V9GYD0 113 aa12.75□□□□□ -0.37
PHTF1-201ENST00000357783 PSMB11A5LHX3 300 aa12.74□□□□□ -0.37
PHTF1-201ENST00000357783 C9JCJ5 164 aa12.74□□□□□ -0.37
PHTF1-201ENST00000357783 LY6HO94772 140 aa12.74□□□□□ -0.37
PHTF1-201ENST00000357783 FBXL19-AS1Q494R0 122 aa12.74□□□□□ -0.37
PHTF1-201ENST00000357783 ZNF672Q499Z4 452 aaPredicted RBP12.74□□□□□ -0.37
PHTF1-201ENST00000357783 CENPWQ5EE01 88 aa12.74□□□□□ -0.37
PHTF1-201ENST00000357783 C19orf35Q6ZS72 473 aa12.74□□□□□ -0.37
PHTF1-201ENST00000357783 DNAJC4Q9NNZ3 241 aa12.74□□□□□ -0.37
PHTF1-201ENST00000357783 SPTBN4Q9H254 2564 aa12.74□□□□□ -0.37
PHTF1-201ENST00000357783 COX7A2P2O60397 106 aa12.74□□□□□ -0.37
PHTF1-201ENST00000357783 IGLV1-47P01700 117 aa12.74□□□□□ -0.37
PHTF1-201ENST00000357783 DDTP30046 118 aa12.74□□□□□ -0.37
PHTF1-201ENST00000357783 PRRX1P54821 245 aa12.74□□□□□ -0.37
PHTF1-201ENST00000357783 PKIAP61925 76 aa12.74□□□□□ -0.37
PHTF1-201ENST00000357783 OR5I1Q13606 314 aa12.74□□□□□ -0.37
PHTF1-201ENST00000357783 TNXAQ16473 311 aa12.74□□□□□ -0.37
PHTF1-201ENST00000357783 SLC25A2Q9BXI2 301 aa12.74□□□□□ -0.37
PHTF1-201ENST00000357783 INSIG2Q9Y5U4 225 aa12.74□□□□□ -0.37
PHTF1-201ENST00000357783 PPIAL4CA0A0B4J2A2 164 aa12.73□□□□□ -0.37
PHTF1-201ENST00000357783 HELTA6NFD8 242 aa12.73□□□□□ -0.37
PHTF1-201ENST00000357783 PPIAL4GP0DN37 164 aa12.73□□□□□ -0.37
PHTF1-201ENST00000357783 GNG4P50150 75 aa12.73□□□□□ -0.37
PHTF1-201ENST00000357783 UBE2L3P68036 154 aaKnown RBP12.73□□□□□ -0.37
PHTF1-201ENST00000357783 OR5AU1Q8NGC0 362 aa12.73□□□□□ -0.37
PHTF1-201ENST00000357783 MISP3Q96FF7 219 aa12.73□□□□□ -0.37
PHTF1-201ENST00000357783 FAM167A-AS1Q96KT0 104 aa12.73□□□□□ -0.37
PHTF1-201ENST00000357783 CLEC7AQ9BXN2 247 aa12.73□□□□□ -0.37
PHTF1-201ENST00000357783 MRPL32Q9BYC8 188 aaKnown RBP12.73□□□□□ -0.37
PHTF1-201ENST00000357783 TRAPPC1Q9Y5R8 145 aa12.73□□□□□ -0.37
PHTF1-201ENST00000357783 COL6A6A6NMZ7 2263 aa12.73□□□□□ -0.37
PHTF1-201ENST00000357783 IGKV1D-37A0A075B6S9 117 aa12.73□□□□□ -0.37
PHTF1-201ENST00000357783 IGLC7A0M8Q6 106 aa12.73□□□□□ -0.37
PHTF1-201ENST00000357783 RPL15P61313 204 aaKnown RBP12.73□□□□□ -0.37
PHTF1-201ENST00000357783 SUMO1P63165 101 aaKnown RBP12.73□□□□□ -0.37
PHTF1-201ENST00000357783 TNFRSF14Q92956 283 aa12.73□□□□□ -0.37
PHTF1-201ENST00000357783 IGHV1-3A0A0C4DH29 117 aa12.72□□□□□ -0.37
PHTF1-201ENST00000357783 TCRBV4S1A1TA0A5B7 111 aa12.72□□□□□ -0.37
PHTF1-201ENST00000357783 BUB1B-PAK6H3BSN5 160 aa12.72□□□□□ -0.37
PHTF1-201ENST00000357783 TAS2R60P59551 318 aa12.72□□□□□ -0.37
PHTF1-201ENST00000357783 ADORA2A-AS1P86434 159 aa12.72□□□□□ -0.37
PHTF1-201ENST00000357783 ZNF124Q15973 351 aa12.72□□□□□ -0.37
PHTF1-201ENST00000357783 UNQ6494/PRO21346Q6UXR6 183 aa12.72□□□□□ -0.37
PHTF1-201ENST00000357783 CHODLQ9H9P2 273 aa12.72□□□□□ -0.37
PHTF1-201ENST00000357783 ZNF355PQ9NSJ1 428 aa12.72□□□□□ -0.37
PHTF1-201ENST00000357783 ARHGAP32A7KAX9 2087 aa12.72□□□□□ -0.37
PHTF1-201ENST00000357783 AMBPP02760 352 aa12.72□□□□□ -0.37
PHTF1-201ENST00000357783 RPL27AP46776 148 aaKnown RBP12.72□□□□□ -0.37
PHTF1-201ENST00000357783 UCNP55089 124 aa12.72□□□□□ -0.37
PHTF1-201ENST00000357783 KLRB1Q12918 225 aa12.72□□□□□ -0.37
PHTF1-201ENST00000357783 C10orf113Q5VZT2 155 aa12.72□□□□□ -0.37
PHTF1-201ENST00000357783 RUSC1-AS1Q66K80 236 aa12.72□□□□□ -0.37
PHTF1-201ENST00000357783 MMD2Q8IY49 270 aa12.72□□□□□ -0.37
PHTF1-201ENST00000357783 TEX45Q8NA69 505 aa12.72□□□□□ -0.37
PHTF1-201ENST00000357783 ST6GALNAC3Q8NDV1 305 aa12.72□□□□□ -0.37
PHTF1-201ENST00000357783 MOSP00540 346 aa12.71□□□□□ -0.37
PHTF1-201ENST00000357783 PYYP10082 97 aa12.71□□□□□ -0.37
PHTF1-201ENST00000357783 LGALS4P56470 323 aa12.71□□□□□ -0.37
PHTF1-201ENST00000357783 ERVFC1-1P60608 527 aa12.71□□□□□ -0.37
PHTF1-201ENST00000357783 COA6Q5JTJ3 125 aaKnown RBP12.71□□□□□ -0.37
PHTF1-201ENST00000357783 BTF3L4Q96K17 158 aa12.71□□□□□ -0.37
PHTF1-201ENST00000357783 ONECUT1Q9UBC0 465 aa12.71□□□□□ -0.37
PHTF1-201ENST00000357783 LY96Q9Y6Y9 160 aa12.71□□□□□ -0.37
PHTF1-201ENST00000357783 IGHV3-21A0A0B4J1V1 117 aa12.71□□□□□ -0.38
PHTF1-201ENST00000357783 TSTD3H0UI37 97 aa12.71□□□□□ -0.38
PHTF1-201ENST00000357783 PAX1P15863 534 aa12.71□□□□□ -0.38
PHTF1-201ENST00000357783 MFAP2P55001 183 aa12.71□□□□□ -0.38
PHTF1-201ENST00000357783 PATE2Q6UY27 113 aa12.71□□□□□ -0.38
PHTF1-201ENST00000357783 RNF2Q99496 336 aa12.71□□□□□ -0.38
PHTF1-201ENST00000357783 IL36BQ9NZH7 164 aa12.71□□□□□ -0.38
PHTF1-201ENST00000357783 HRNRQ86YZ3 2850 aaPredicted RBP12.71□□□□□ -0.38
PHTF1-201ENST00000357783 CNN1P51911 297 aaKnown RBP12.7□□□□□ -0.38
PHTF1-201ENST00000357783 THAP8Q8NA92 274 aa12.7□□□□□ -0.38
PHTF1-201ENST00000357783 OR8B3Q8NGG8 313 aa12.7□□□□□ -0.38
PHTF1-201ENST00000357783 RPEQ96AT9 228 aa12.7□□□□□ -0.38
PHTF1-201ENST00000357783 OR8B2Q96RD0 313 aa12.7□□□□□ -0.38
PHTF1-201ENST00000357783 SIGLEC9Q9Y336 463 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms