RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 RPL8P62917 257 aaKnown RBP14.38□□□□□ -0.11
RTN4-204ENST00000357732 STXBP6Q8NFX7 210 aa14.38□□□□□ -0.11
RTN4-204ENST00000357732 ZFP30Q9Y2G7 519 aa14.38□□□□□ -0.11
RTN4-204ENST00000357732 PCNX2A6NKB5 2137 aa14.38□□□□□ -0.11
RTN4-204ENST00000357732 COX7A2P2O60397 106 aa14.37□□□□□ -0.11
RTN4-204ENST00000357732 SPINK4O60575 86 aa14.37□□□□□ -0.11
RTN4-204ENST00000357732 OR2J3O76001 311 aa14.37□□□□□ -0.11
RTN4-204ENST00000357732 C3orf79P0CE67 100 aa14.37□□□□□ -0.11
RTN4-204ENST00000357732 FAM162BQ5T6X4 162 aa14.37□□□□□ -0.11
RTN4-204ENST00000357732 OR5AN1Q8NGI8 311 aa14.37□□□□□ -0.11
RTN4-204ENST00000357732 C18orf32Q8TCD1 76 aa14.37□□□□□ -0.11
RTN4-204ENST00000357732 ZNF430Q9H8G1 570 aaPredicted RBP14.37□□□□□ -0.11
RTN4-204ENST00000357732 SAP30LQ9HAJ7 183 aa14.37□□□□□ -0.11
RTN4-204ENST00000357732 PEX7O00628 323 aa14.37□□□□□ -0.11
RTN4-204ENST00000357732 IGHV1-46P01743 117 aa14.37□□□□□ -0.11
RTN4-204ENST00000357732 HIST1H1EP10412 219 aaKnown RBP14.37□□□□□ -0.11
RTN4-204ENST00000357732 TBR1Q16650 682 aa14.37□□□□□ -0.11
RTN4-204ENST00000357732 KIAA1644Q3SXP7 199 aa14.37□□□□□ -0.11
RTN4-204ENST00000357732 C10orf113Q5VZT2 155 aa14.37□□□□□ -0.11
RTN4-204ENST00000357732 SEM1Q6ZVN7 128 aa14.37□□□□□ -0.11
RTN4-204ENST00000357732 THAP8Q8NA92 274 aa14.37□□□□□ -0.11
RTN4-204ENST00000357732 TMEM167AQ8TBQ9 72 aa14.37□□□□□ -0.11
RTN4-204ENST00000357732 HARBI1Q96MB7 349 aa14.37□□□□□ -0.11
RTN4-204ENST00000357732 PAXXQ9BUH6 204 aa14.37□□□□□ -0.11
RTN4-204ENST00000357732 HEATR1Q9H583 2144 aaKnown RBP14.37□□□□□ -0.11
RTN4-204ENST00000357732 DSCAMO60469 2012 aa14.36□□□□□ -0.11
RTN4-204ENST00000357732 NKX6-3A6NJ46 265 aa14.36□□□□□ -0.11
RTN4-204ENST00000357732 FAM201AQ5SY85 155 aa14.36□□□□□ -0.11
RTN4-204ENST00000357732 TCRBV4S1A1TA0A5B7 111 aa14.36□□□□□ -0.11
RTN4-204ENST00000357732 SLC35B1P78383 322 aa14.36□□□□□ -0.11
RTN4-204ENST00000357732 ZNF329Q86UD4 541 aa14.36□□□□□ -0.11
RTN4-204ENST00000357732 C8orf31Q8N9H6 132 aa14.36□□□□□ -0.11
RTN4-204ENST00000357732 CCL13Q99616 98 aa14.36□□□□□ -0.11
RTN4-204ENST00000357732 H0YJW9 148 aa14.35□□□□□ -0.11
RTN4-204ENST00000357732 DUX4L9Q6RFH8 374 aaPredicted RBP14.35□□□□□ -0.11
RTN4-204ENST00000357732 PDPNQ86YL7 162 aa14.35□□□□□ -0.11
RTN4-204ENST00000357732 ASCL3Q9NQ33 180 aa14.35□□□□□ -0.11
RTN4-204ENST00000357732 ZNF355PQ9NSJ1 428 aa14.35□□□□□ -0.11
RTN4-204ENST00000357732 SPAARA0A1B0GVQ0 90 aa14.34□□□□□ -0.11
RTN4-204ENST00000357732 HYPMO75409 117 aa14.34□□□□□ -0.11
RTN4-204ENST00000357732 SLAQ13239 276 aa14.34□□□□□ -0.11
RTN4-204ENST00000357732 ZNF474Q6S9Z5 364 aaPredicted RBP14.34□□□□□ -0.11
RTN4-204ENST00000357732 DEFB124Q8NES8 71 aa14.34□□□□□ -0.11
RTN4-204ENST00000357732 OR4C13Q8NGP0 309 aa14.34□□□□□ -0.11
RTN4-204ENST00000357732 FLYWCH2Q96CP2 140 aaKnown RBP14.34□□□□□ -0.11
RTN4-204ENST00000357732 COL8A2P25067 703 aa14.34□□□□□ -0.11
RTN4-204ENST00000357732 DEFB109BQ30KR1 87 aa14.34□□□□□ -0.11
RTN4-204ENST00000357732 VHLLQ6RSH7 139 aa14.34□□□□□ -0.11
RTN4-204ENST00000357732 SPACA3Q8IXA5 215 aa14.34□□□□□ -0.11
RTN4-204ENST00000357732 FAM216BQ8N7L0 139 aa14.34□□□□□ -0.11
RTN4-204ENST00000357732 OR10W1Q8NGF6 305 aa14.34□□□□□ -0.11
RTN4-204ENST00000357732 TXN2Q99757 166 aa14.34□□□□□ -0.11
RTN4-204ENST00000357732 MRPS16Q9Y3D3 137 aaKnown RBP14.34□□□□□ -0.11
RTN4-204ENST00000357732 SOX21Q9Y651 276 aaPredicted RBP14.34□□□□□ -0.11
RTN4-204ENST00000357732 INTS1Q8N201 2190 aaKnown RBP14.33□□□□□ -0.11
RTN4-204ENST00000357732 A6NNC1 897 aa14.33□□□□□ -0.11
RTN4-204ENST00000357732 MYCNOSP40205 109 aa14.33□□□□□ -0.11
RTN4-204ENST00000357732 HNRNPA3P51991 378 aaKnown RBP14.33□□□□□ -0.11
RTN4-204ENST00000357732 NUP35Q8NFH5 326 aa14.33□□□□□ -0.11
RTN4-204ENST00000357732 MRPL20Q9BYC9 149 aaKnown RBP14.33□□□□□ -0.11
RTN4-204ENST00000357732 FTH1P19P0C7X4 201 aa14.33□□□□□ -0.12
RTN4-204ENST00000357732 CA7P43166 264 aa14.33□□□□□ -0.12
RTN4-204ENST00000357732 MFAP2P55001 183 aa14.33□□□□□ -0.12
RTN4-204ENST00000357732 RELQ04864 619 aaPredicted RBP14.33□□□□□ -0.12
RTN4-204ENST00000357732 MLANAQ16655 118 aa14.33□□□□□ -0.12
RTN4-204ENST00000357732 NUP37Q8NFH4 326 aa14.33□□□□□ -0.12
RTN4-204ENST00000357732 NUDT10Q8NFP7 164 aa14.33□□□□□ -0.12
RTN4-204ENST00000357732 SNRNP40Q96DI7 357 aaKnown RBP14.33□□□□□ -0.12
RTN4-204ENST00000357732 NUDT11Q96G61 164 aa14.33□□□□□ -0.12
RTN4-204ENST00000357732 LAMTOR2Q9Y2Q5 125 aa14.33□□□□□ -0.12
RTN4-204ENST00000357732 HSBP1O75506 76 aa14.32□□□□□ -0.12
RTN4-204ENST00000357732 CEACAM4O75871 244 aa14.32□□□□□ -0.12
RTN4-204ENST00000357732 NPSP0C0P6 89 aa14.32□□□□□ -0.12
RTN4-204ENST00000357732 TNFRSF1AP19438 455 aa14.32□□□□□ -0.12
RTN4-204ENST00000357732 CT83Q5H943 113 aa14.32□□□□□ -0.12
RTN4-204ENST00000357732 MORN5Q5VZ52 161 aa14.32□□□□□ -0.12
RTN4-204ENST00000357732 CYB5R2Q6BCY4 276 aa14.32□□□□□ -0.12
RTN4-204ENST00000357732 ETFRF1Q6IPR1 90 aa14.32□□□□□ -0.12
RTN4-204ENST00000357732 Q6ZN92 141 aa14.32□□□□□ -0.12
RTN4-204ENST00000357732 PIP4P1Q86T03 277 aa14.32□□□□□ -0.12
RTN4-204ENST00000357732 LINC00311Q8N616 119 aa14.32□□□□□ -0.12
RTN4-204ENST00000357732 OR2T6Q8NHC8 308 aa14.32□□□□□ -0.12
RTN4-204ENST00000357732 ZNF596Q8TC21 504 aa14.32□□□□□ -0.12
RTN4-204ENST00000357732 TMEM190Q8WZ59 177 aa14.32□□□□□ -0.12
RTN4-204ENST00000357732 TMEM186Q96B77 213 aa14.32□□□□□ -0.12
RTN4-204ENST00000357732 FXYD5Q96DB9 178 aa14.32□□□□□ -0.12
RTN4-204ENST00000357732 RBM14Q96PK6 669 aaKnown RBP14.32□□□□□ -0.12
RTN4-204ENST00000357732 KLF12Q9Y4X4 402 aa14.32□□□□□ -0.12
RTN4-204ENST00000357732 RAI1Q7Z5J4 1906 aaPredicted RBP14.32□□□□□ -0.12
RTN4-204ENST00000357732 TRAV5A0A0B4J249 113 aa14.32□□□□□ -0.12
RTN4-204ENST00000357732 FSTL3O95633 263 aa14.32□□□□□ -0.12
RTN4-204ENST00000357732 BATFQ16520 125 aa14.32□□□□□ -0.12
RTN4-204ENST00000357732 DEFB108BQ8NET1 73 aa14.32□□□□□ -0.12
RTN4-204ENST00000357732 C7orf69Q9H7B7 122 aa14.32□□□□□ -0.12
RTN4-204ENST00000357732 YLPM1P49750 1951 aaKnown RBP14.31□□□□□ -0.12
RTN4-204ENST00000357732 CHRNB4P30926 498 aa14.31□□□□□ -0.12
RTN4-204ENST00000357732 FAM168AQ92567 244 aa14.31□□□□□ -0.12
RTN4-204ENST00000357732 RND1Q92730 232 aa14.31□□□□□ -0.12
RTN4-204ENST00000357732 ALKBH7Q9BT30 221 aaPredicted RBP14.31□□□□□ -0.12
RTN4-204ENST00000357732 A0A1B0GXF2 115 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms