RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 TMEM191AQ9H0A3 160 aa8.7□□□□□ -1.02
CAPN3-205ENST00000357568 AHCTF1Q8WYP5 2266 aa8.7□□□□□ -1.02
CAPN3-205ENST00000357568 OR4C46A6NHA9 309 aa8.7□□□□□ -1.02
CAPN3-205ENST00000357568 SPINK4O60575 86 aa8.7□□□□□ -1.02
CAPN3-205ENST00000357568 GRPP07492 148 aa8.7□□□□□ -1.02
CAPN3-205ENST00000357568 MFAP2P55001 183 aa8.7□□□□□ -1.02
CAPN3-205ENST00000357568 ARF6P62330 175 aa8.7□□□□□ -1.02
CAPN3-205ENST00000357568 C2orf83Q53S99 150 aa8.7□□□□□ -1.02
CAPN3-205ENST00000357568 Q6ZR03 302 aa8.7□□□□□ -1.02
CAPN3-205ENST00000357568 ATOH7Q8N100 152 aa8.7□□□□□ -1.02
CAPN3-205ENST00000357568 NUP35Q8NFH5 326 aa8.7□□□□□ -1.02
CAPN3-205ENST00000357568 PPP1R35Q8TAP8 253 aa8.7□□□□□ -1.02
CAPN3-205ENST00000357568 TMEM190Q8WZ59 177 aa8.7□□□□□ -1.02
CAPN3-205ENST00000357568 SLC25A33Q9BSK2 321 aa8.7□□□□□ -1.02
CAPN3-205ENST00000357568 IFI27L2Q9H2X8 130 aa8.7□□□□□ -1.02
CAPN3-205ENST00000357568 SERTAD4Q9NUC0 356 aa8.7□□□□□ -1.02
CAPN3-205ENST00000357568 ZNHIT1O43257 154 aa8.69□□□□□ -1.02
CAPN3-205ENST00000357568 MGST1P10620 155 aaKnown RBP8.69□□□□□ -1.02
CAPN3-205ENST00000357568 HIST1H1AQ02539 215 aaPredicted RBP8.69□□□□□ -1.02
CAPN3-205ENST00000357568 FAM53AQ6NSI3 398 aaPredicted RBP8.69□□□□□ -1.02
CAPN3-205ENST00000357568 TCF24Q7RTU0 167 aa8.69□□□□□ -1.02
CAPN3-205ENST00000357568 ZADH2Q8N4Q0 377 aa8.69□□□□□ -1.02
CAPN3-205ENST00000357568 SLC25A40Q8TBP6 338 aa8.69□□□□□ -1.02
CAPN3-205ENST00000357568 DUSP13Q9UII6 198 aa8.69□□□□□ -1.02
CAPN3-205ENST00000357568 ESPL1Q14674 2120 aa8.69□□□□□ -1.02
CAPN3-205ENST00000357568 SYS1-DBNDD2H3BUS1 97 aa8.69□□□□□ -1.02
CAPN3-205ENST00000357568 CA7P43166 264 aa8.69□□□□□ -1.02
CAPN3-205ENST00000357568 PRCDQ00LT1 54 aa8.69□□□□□ -1.02
CAPN3-205ENST00000357568 SRYQ05066 204 aa8.69□□□□□ -1.02
CAPN3-205ENST00000357568 LINC01559Q495D7 138 aa8.69□□□□□ -1.02
CAPN3-205ENST00000357568 GDF5OSQ5U4N7 250 aa8.69□□□□□ -1.02
CAPN3-205ENST00000357568 RNASEKQ6P5S7 137 aaKnown RBP8.69□□□□□ -1.02
CAPN3-205ENST00000357568 WDR82Q6UXN9 313 aa8.69□□□□□ -1.02
CAPN3-205ENST00000357568 OR1L8Q8NGR8 309 aa8.69□□□□□ -1.02
CAPN3-205ENST00000357568 CACNG8Q8WXS5 425 aa8.69□□□□□ -1.02
CAPN3-205ENST00000357568 DOCK10Q96BY6 2186 aa8.69□□□□□ -1.02
CAPN3-205ENST00000357568 AKAP13Q12802 2813 aa8.69□□□□□ -1.02
CAPN3-205ENST00000357568 OR7C2O60412 319 aa8.68□□□□□ -1.02
CAPN3-205ENST00000357568 TMEM30BQ3MIR4 351 aa8.68□□□□□ -1.02
CAPN3-205ENST00000357568 RNFT1Q5M7Z0 435 aa8.68□□□□□ -1.02
CAPN3-205ENST00000357568 TMEM108Q6UXF1 575 aa8.68□□□□□ -1.02
CAPN3-205ENST00000357568 LINC00696Q6ZRV3 163 aa8.68□□□□□ -1.02
CAPN3-205ENST00000357568 MDS2Q8NDY4 140 aa8.68□□□□□ -1.02
CAPN3-205ENST00000357568 DPF1Q92782 380 aa8.68□□□□□ -1.02
CAPN3-205ENST00000357568 C7orf69Q9H7B7 122 aa8.68□□□□□ -1.02
CAPN3-205ENST00000357568 ZNF430Q9H8G1 570 aaPredicted RBP8.68□□□□□ -1.02
CAPN3-205ENST00000357568 SCRT2Q9NQ03 307 aa8.68□□□□□ -1.02
CAPN3-205ENST00000357568 GNG12Q9UBI6 72 aa8.68□□□□□ -1.02
CAPN3-205ENST00000357568 PEF1Q9UBV8 284 aaKnown RBP8.68□□□□□ -1.02
CAPN3-205ENST00000357568 URB1O60287 2271 aaKnown RBP8.68□□□□□ -1.02
CAPN3-205ENST00000357568 IGHV3-43A0A0B4J1X8 118 aa8.68□□□□□ -1.02
CAPN3-205ENST00000357568 TRAV3A0A0B4J244 114 aa8.68□□□□□ -1.02
CAPN3-205ENST00000357568 PSMB11A5LHX3 300 aa8.68□□□□□ -1.02
CAPN3-205ENST00000357568 FAM231BA6NCW3 169 aa8.68□□□□□ -1.02
CAPN3-205ENST00000357568 AHRRA9YTQ3 701 aa8.68□□□□□ -1.02
CAPN3-205ENST00000357568 INS-IGF2F8WCM5 200 aa8.68□□□□□ -1.02
CAPN3-205ENST00000357568 MGST3O14880 152 aa8.68□□□□□ -1.02
CAPN3-205ENST00000357568 IGHV3-43DP0DP04 118 aa8.68□□□□□ -1.02
CAPN3-205ENST00000357568 LOXL3P58215 753 aa8.68□□□□□ -1.02
CAPN3-205ENST00000357568 LINC00205P59089 165 aa8.68□□□□□ -1.02
CAPN3-205ENST00000357568 SLC35B1P78383 322 aa8.68□□□□□ -1.02
CAPN3-205ENST00000357568 MPV17L2Q567V2 206 aa8.68□□□□□ -1.02
CAPN3-205ENST00000357568 LDLRAD2Q5SZI1 272 aa8.68□□□□□ -1.02
CAPN3-205ENST00000357568 OR4A47Q6IF82 309 aa8.68□□□□□ -1.02
CAPN3-205ENST00000357568 ABHD17AQ96GS6 310 aa8.68□□□□□ -1.02
CAPN3-205ENST00000357568 FAM167A-AS1Q96KT0 104 aa8.68□□□□□ -1.02
CAPN3-205ENST00000357568 GFRA4Q9GZZ7 299 aa8.68□□□□□ -1.02
CAPN3-205ENST00000357568 IDI2-AS1Q9NZ38 188 aa8.68□□□□□ -1.02
CAPN3-205ENST00000357568 TRAV17A0A0B4J275 112 aa8.67□□□□□ -1.02
CAPN3-205ENST00000357568 WNT9BO14905 357 aa8.67□□□□□ -1.02
CAPN3-205ENST00000357568 LIPFP07098 398 aa8.67□□□□□ -1.02
CAPN3-205ENST00000357568 CEACAM3P40198 252 aa8.67□□□□□ -1.02
CAPN3-205ENST00000357568 SEC11AP67812 179 aa8.67□□□□□ -1.02
CAPN3-205ENST00000357568 HBBP68871 147 aa8.67□□□□□ -1.02
CAPN3-205ENST00000357568 Q6ZVH6 145 aa8.67□□□□□ -1.02
CAPN3-205ENST00000357568 GCSAMQ8N6F7 178 aa8.67□□□□□ -1.02
CAPN3-205ENST00000357568 SNRNP40Q96DI7 357 aaKnown RBP8.67□□□□□ -1.02
CAPN3-205ENST00000357568 URB1-AS1Q96HZ7 61 aa8.67□□□□□ -1.02
CAPN3-205ENST00000357568 OBP2BQ9NPH6 170 aa8.67□□□□□ -1.02
CAPN3-205ENST00000357568 ZNF492Q9P255 531 aa8.67□□□□□ -1.02
CAPN3-205ENST00000357568 USF3Q68DE3 2245 aa8.67□□□□□ -1.02
CAPN3-205ENST00000357568 MED12LQ86YW9 2145 aa8.67□□□□□ -1.02
CAPN3-205ENST00000357568 SPEGQ15772 3267 aa8.67□□□□□ -1.02
CAPN3-205ENST00000357568 PEX7O00628 323 aa8.67□□□□□ -1.02
CAPN3-205ENST00000357568 ACTL6BO94805 426 aa8.67□□□□□ -1.02
CAPN3-205ENST00000357568 PRR27Q6MZM9 219 aa8.67□□□□□ -1.02
CAPN3-205ENST00000357568 Q6ZS92 163 aa8.67□□□□□ -1.02
CAPN3-205ENST00000357568 OR1L4Q8NGR5 311 aa8.67□□□□□ -1.02
CAPN3-205ENST00000357568 TTTY12Q9BZ98 90 aa8.67□□□□□ -1.02
CAPN3-205ENST00000357568 GCM1Q9NP62 436 aa8.67□□□□□ -1.02
CAPN3-205ENST00000357568 KLF13Q9Y2Y9 288 aaPredicted RBP8.67□□□□□ -1.02
CAPN3-205ENST00000357568 WASHC3Q9Y3C0 194 aa8.67□□□□□ -1.02
CAPN3-205ENST00000357568 AMMECR1Q9Y4X0 333 aaPredicted RBP8.67□□□□□ -1.02
CAPN3-205ENST00000357568 NUDT3O95989 172 aa8.67□□□□□ -1.02
CAPN3-205ENST00000357568 CFHR2P36980 270 aa8.67□□□□□ -1.02
CAPN3-205ENST00000357568 RPL8P62917 257 aaKnown RBP8.67□□□□□ -1.02
CAPN3-205ENST00000357568 TMEM178AQ8NBL3 297 aa8.67□□□□□ -1.02
CAPN3-205ENST00000357568 KLF14Q8TD94 323 aaPredicted RBP8.67□□□□□ -1.02
CAPN3-205ENST00000357568 SLC25A2Q9BXI2 301 aa8.67□□□□□ -1.02
CAPN3-205ENST00000357568 KLF12Q9Y4X4 402 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms