RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 C21orf62-AS1Q17RA5 79 aa4.63□□□□□ -1.67
PTPRD-202ENST00000356435 ZNF585BQ52M93 769 aa4.63□□□□□ -1.67
PTPRD-202ENST00000356435 ORMDL2Q53FV1 153 aa4.63□□□□□ -1.67
PTPRD-202ENST00000356435 LINC01356Q8N9X3 169 aa4.63□□□□□ -1.67
PTPRD-202ENST00000356435 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.63□□□□□ -1.67
PTPRD-202ENST00000356435 C4orf51C9J302 202 aa4.63□□□□□ -1.67
PTPRD-202ENST00000356435 DANCRP0C864 163 aa4.63□□□□□ -1.67
PTPRD-202ENST00000356435 DMRTA2Q96SC8 542 aa4.63□□□□□ -1.67
PTPRD-202ENST00000356435 TNS1Q9HBL0 1735 aaKnown RBP4.63□□□□□ -1.67
PTPRD-202ENST00000356435 TRAV9-1A0A075B6T8 112 aa4.63□□□□□ -1.67
PTPRD-202ENST00000356435 ZIC3O60481 467 aa4.63□□□□□ -1.67
PTPRD-202ENST00000356435 NDUFA3O95167 84 aa4.63□□□□□ -1.67
PTPRD-202ENST00000356435 GNLYP22749 145 aa4.63□□□□□ -1.67
PTPRD-202ENST00000356435 MUC21Q5SSG8 566 aa4.63□□□□□ -1.67
PTPRD-202ENST00000356435 LINC01549A6NIU2 74 aa4.63□□□□□ -1.67
PTPRD-202ENST00000356435 IL18BPO95998 194 aa4.63□□□□□ -1.67
PTPRD-202ENST00000356435 TRGC2P03986 189 aa4.63□□□□□ -1.67
PTPRD-202ENST00000356435 OR9G9P0C7N8 305 aa4.63□□□□□ -1.67
PTPRD-202ENST00000356435 SRSF1Q07955 248 aaKnown RBP eCLIP4.63□□□□□ -1.67
PTPRD-202ENST00000356435 CTHRC1Q96CG8 243 aa4.63□□□□□ -1.67
PTPRD-202ENST00000356435 SLC25A2Q9BXI2 301 aa4.63□□□□□ -1.67
PTPRD-202ENST00000356435 WDR81Q562E7 1941 aa4.63□□□□□ -1.67
PTPRD-202ENST00000356435 ADCYAP1P18509 176 aa4.63□□□□□ -1.67
PTPRD-202ENST00000356435 ST6GALNAC3Q8NDV1 305 aa4.63□□□□□ -1.67
PTPRD-202ENST00000356435 JPT2Q9H910 190 aa4.63□□□□□ -1.67
PTPRD-202ENST00000356435 GRIFINA4D1Z8 144 aa4.63□□□□□ -1.67
PTPRD-202ENST00000356435 C17orf98A8MV24 154 aa4.63□□□□□ -1.67
PTPRD-202ENST00000356435 TMEM14DPA8MWL7 114 aa4.63□□□□□ -1.67
PTPRD-202ENST00000356435 GLMPQ8WWB7 406 aa4.63□□□□□ -1.67
PTPRD-202ENST00000356435 WFDC6Q9BQY6 131 aa4.63□□□□□ -1.67
PTPRD-202ENST00000356435 PARD6GQ9BYG4 376 aaPredicted RBP4.63□□□□□ -1.67
PTPRD-202ENST00000356435 GGTLC3B5MD39 225 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 UPK2O00526 184 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 CELA3BP08861 270 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 TFF3Q07654 80 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 SRSF7Q16629 238 aaKnown RBP eCLIP4.62□□□□□ -1.67
PTPRD-202ENST00000356435 BMPERQ8N8U9 685 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 NDUFAF3Q9BU61 184 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 FAM90A9PA6NNJ1 464 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 OOSP1A8MZH6 123 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 H0YL77 283 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 C1QL1O75973 258 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 CGAP01215 116 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 PLNP26678 52 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 PRCDQ00LT1 54 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 MS4A6AQ9H2W1 248 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 NRN1Q9NPD7 142 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 TMEM242Q9NWH2 141 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 ARID1BQ8NFD5 2236 aaPredicted RBP4.62□□□□□ -1.67
PTPRD-202ENST00000356435 IGKV3D-20A0A0C4DH25 116 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 IZUMO1RA6ND01 250 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 C15orf61A6NNL5 157 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 LHX2P50458 406 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 LINC00114Q6XXX2 140 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 FAM169BQ8N8A8 192 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 CRIM1Q9NZV1 1036 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 TMEM95Q3KNT9 176 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 FBLN7Q53RD9 439 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 C11orf44Q8N8P7 122 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 APCDD1LQ8NCL9 501 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 RCHY1Q96PM5 261 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 FABP5P3A8MUU1 101 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 TIMM23O14925 209 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 SMIM10L1P0DMW3 83 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 LINC01590Q5TEZ4 76 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 SMIM10Q96HG1 83 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 MESP1Q9BRJ9 268 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 A0A1B0GWJ7 208 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 NAPSAO96009 420 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 GPHA2Q96T91 129 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 TM2D1Q9BX74 207 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 ZNF236Q9UL36 1845 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 FAM223BA6NKX1 122 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 FAM223AQ8IWN6 122 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 LYPD6BQ8NI32 183 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 TRGV1A0A0A0MS02 117 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 MINOS1Q5TGZ0 78 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 OVOL2Q9BRP0 275 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 MCRIP2Q9BUT9 160 aaKnown RBP4.62□□□□□ -1.67
PTPRD-202ENST00000356435 IL36BQ9NZH7 164 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 MINOS1-NBL1R4GNA1 71 aa4.62□□□□□ -1.67
PTPRD-202ENST00000356435 TRAV12-3A0A0B4J271 114 aa4.61□□□□□ -1.67
PTPRD-202ENST00000356435 HOXD3P31249 432 aaPredicted RBP4.61□□□□□ -1.67
PTPRD-202ENST00000356435 LINC00158P58513 81 aa4.61□□□□□ -1.67
PTPRD-202ENST00000356435 ZSWIM8A7E2V4 1837 aa4.61□□□□□ -1.67
PTPRD-202ENST00000356435 YPEL1O60688 119 aa4.61□□□□□ -1.67
PTPRD-202ENST00000356435 LYPD3O95274 346 aa4.61□□□□□ -1.67
PTPRD-202ENST00000356435 APOMO95445 188 aa4.61□□□□□ -1.67
PTPRD-202ENST00000356435 PSG7Q13046 419 aa4.61□□□□□ -1.67
PTPRD-202ENST00000356435 SPSB3Q6PJ21 355 aa4.61□□□□□ -1.67
PTPRD-202ENST00000356435 YPEL2Q96QA6 119 aa4.61□□□□□ -1.67
PTPRD-202ENST00000356435 GFI1Q99684 422 aa4.61□□□□□ -1.67
PTPRD-202ENST00000356435 CYTL1Q9NRR1 136 aa4.61□□□□□ -1.67
PTPRD-202ENST00000356435 RPL35AP18077 110 aaKnown RBP4.61□□□□□ -1.67
PTPRD-202ENST00000356435 TIMP3P35625 211 aa4.61□□□□□ -1.67
PTPRD-202ENST00000356435 LOC285556D6RIA3 1793 aa4.61□□□□□ -1.67
PTPRD-202ENST00000356435 MUC21A0A0G2JKD1 596 aa4.61□□□□□ -1.67
PTPRD-202ENST00000356435 MUC21A0A140T8X8 626 aa4.61□□□□□ -1.67
PTPRD-202ENST00000356435 TBX6O95947 436 aaPredicted RBP4.61□□□□□ -1.67
PTPRD-202ENST00000356435 IGHV4-39P01824 125 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms