RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 ZNF415Q09FC8 603 aa13.42□□□□□ -0.26
RXRA-201ENST00000356384 ATRAIDQ6UW56 229 aa13.42□□□□□ -0.26
RXRA-201ENST00000356384 ZNF837Q96EG3 531 aaPredicted RBP13.42□□□□□ -0.26
RXRA-201ENST00000356384 TRIP12Q14669 1992 aaPredicted RBP13.42□□□□□ -0.26
RXRA-201ENST00000356384 TMEM170AQ8WVE7 144 aa13.42□□□□□ -0.26
RXRA-201ENST00000356384 CHCHD5Q9BSY4 110 aa13.42□□□□□ -0.26
RXRA-201ENST00000356384 RIPPLY3P57055 190 aa13.42□□□□□ -0.26
RXRA-201ENST00000356384 ZNF688P0C7X2 276 aa13.41□□□□□ -0.26
RXRA-201ENST00000356384 FAM57AQ8TBR7 257 aa13.41□□□□□ -0.26
RXRA-201ENST00000356384 ABHD17AQ96GS6 310 aa13.41□□□□□ -0.26
RXRA-201ENST00000356384 CD55P08174 381 aa13.41□□□□□ -0.26
RXRA-201ENST00000356384 LINC00158P58513 81 aa13.41□□□□□ -0.26
RXRA-201ENST00000356384 FAM186AA6NE01 2351 aa13.41□□□□□ -0.26
RXRA-201ENST00000356384 A0A1W2PR77 199 aa13.41□□□□□ -0.26
RXRA-201ENST00000356384 A8MXK9 166 aa13.41□□□□□ -0.26
RXRA-201ENST00000356384 SRD5A1P18405 259 aa13.41□□□□□ -0.26
RXRA-201ENST00000356384 CD33P20138 364 aa13.41□□□□□ -0.26
RXRA-201ENST00000356384 LHX2P50458 406 aa13.41□□□□□ -0.26
RXRA-201ENST00000356384 PVRIGQ6DKI7 326 aa13.41□□□□□ -0.26
RXRA-201ENST00000356384 PSG8Q9UQ74 426 aa13.41□□□□□ -0.26
RXRA-201ENST00000356384 PARP14Q460N5 1801 aa13.41□□□□□ -0.26
RXRA-201ENST00000356384 RHOGP84095 191 aa13.41□□□□□ -0.26
RXRA-201ENST00000356384 S100A7L2Q5SY68 101 aa13.41□□□□□ -0.26
RXRA-201ENST00000356384 C11orf44Q8N8P7 122 aa13.41□□□□□ -0.26
RXRA-201ENST00000356384 ADARB2-AS1A8MUL3 147 aa13.41□□□□□ -0.26
RXRA-201ENST00000356384 IQCF6A8MYZ5 107 aa13.41□□□□□ -0.26
RXRA-201ENST00000356384 DUSP14O95147 198 aaKnown RBP13.41□□□□□ -0.26
RXRA-201ENST00000356384 TFF1P04155 84 aa13.41□□□□□ -0.26
RXRA-201ENST00000356384 SLC25A2Q9BXI2 301 aa13.41□□□□□ -0.26
RXRA-201ENST00000356384 DEPPQ9NTK1 212 aa13.4□□□□□ -0.26
RXRA-201ENST00000356384 IGKCP01834 107 aa13.4□□□□□ -0.26
RXRA-201ENST00000356384 SRSF4Q08170 494 aaKnown RBP13.4□□□□□ -0.26
RXRA-201ENST00000356384 CD300EQ496F6 205 aaPredicted RBP13.4□□□□□ -0.26
RXRA-201ENST00000356384 FAM90A1Q86YD7 464 aa13.4□□□□□ -0.26
RXRA-201ENST00000356384 TRAV9-2A0A087WT02 112 aa13.4□□□□□ -0.26
RXRA-201ENST00000356384 C15orf61A6NNL5 157 aa13.4□□□□□ -0.26
RXRA-201ENST00000356384 TMEM86BQ8N661 226 aa13.4□□□□□ -0.26
RXRA-201ENST00000356384 IGKV1D-13A0A0B4J2D9 117 aa13.4□□□□□ -0.26
RXRA-201ENST00000356384 IGKV1-13P0DP09 117 aa13.4□□□□□ -0.26
RXRA-201ENST00000356384 NPC2P61916 151 aa13.4□□□□□ -0.26
RXRA-201ENST00000356384 C18orf12Q96KH6 178 aa13.4□□□□□ -0.26
RXRA-201ENST00000356384 PRSS22Q9GZN4 317 aa13.4□□□□□ -0.26
RXRA-201ENST00000356384 CST9LQ9H4G1 147 aa13.4□□□□□ -0.26
RXRA-201ENST00000356384 SELENOKQ9Y6D0 94 aa13.4□□□□□ -0.26
RXRA-201ENST00000356384 TRIOBPQ9H2D6 2365 aa13.4□□□□□ -0.26
RXRA-201ENST00000356384 ORMDL2Q53FV1 153 aa13.39□□□□□ -0.27
RXRA-201ENST00000356384 CKAP5Q14008 2032 aa13.39□□□□□ -0.27
RXRA-201ENST00000356384 RAMP3O60896 148 aa13.39□□□□□ -0.27
RXRA-201ENST00000356384 ZXDCQ2QGD7 858 aaPredicted RBP13.39□□□□□ -0.27
RXRA-201ENST00000356384 ORAOV1Q8WV07 137 aa13.39□□□□□ -0.27
RXRA-201ENST00000356384 TRBV6-7A0A0A0MS04 114 aa13.39□□□□□ -0.27
RXRA-201ENST00000356384 LINC00587B1AMM8 73 aa13.39□□□□□ -0.27
RXRA-201ENST00000356384 C1QL4Q86Z23 238 aa13.39□□□□□ -0.27
RXRA-201ENST00000356384 C9orf106Q8NAJ2 232 aa13.39□□□□□ -0.27
RXRA-201ENST00000356384 TCRBV4S1A1TA0A5B7 111 aa13.38□□□□□ -0.27
RXRA-201ENST00000356384 A8MWV9 139 aa13.38□□□□□ -0.27
RXRA-201ENST00000356384 SRSF3P84103 164 aaKnown RBP13.38□□□□□ -0.27
RXRA-201ENST00000356384 OR9G4Q8NGQ1 327 aa13.38□□□□□ -0.27
RXRA-201ENST00000356384 MIA3Q5JRA6 1907 aa13.38□□□□□ -0.27
RXRA-201ENST00000356384 FOXL1Q12952 345 aa13.38□□□□□ -0.27
RXRA-201ENST00000356384 M0R2P5 195 aa13.38□□□□□ -0.27
RXRA-201ENST00000356384 NSUN5P1Q3KNT7 163 aa13.38□□□□□ -0.27
RXRA-201ENST00000356384 LHFPL4Q7Z7J7 247 aa13.38□□□□□ -0.27
RXRA-201ENST00000356384 TRGV11A0A075B6L2 103 aa13.37□□□□□ -0.27
RXRA-201ENST00000356384 YPEL1O60688 119 aa13.37□□□□□ -0.27
RXRA-201ENST00000356384 ATXN8Q156A1 80 aa13.37□□□□□ -0.27
RXRA-201ENST00000356384 ZNF479Q96JC4 524 aa13.37□□□□□ -0.27
RXRA-201ENST00000356384 YPEL2Q96QA6 119 aa13.37□□□□□ -0.27
RXRA-201ENST00000356384 TMEM133Q9H2Q1 129 aa13.37□□□□□ -0.27
RXRA-201ENST00000356384 NRN1LQ496H8 165 aa13.37□□□□□ -0.27
RXRA-201ENST00000356384 ZCCHC24Q8N2G6 241 aaKnown RBP13.37□□□□□ -0.27
RXRA-201ENST00000356384 GATD1Q8NB37 220 aa13.37□□□□□ -0.27
RXRA-201ENST00000356384 OSTCQ9NRP0 149 aa13.37□□□□□ -0.27
RXRA-201ENST00000356384 MORN2Q502X0 79 aa13.37□□□□□ -0.27
RXRA-201ENST00000356384 NDUFAF3Q9BU61 184 aa13.37□□□□□ -0.27
RXRA-201ENST00000356384 LYNX1G3V0Z9 82 aa13.37□□□□□ -0.27
RXRA-201ENST00000356384 LYNX1P0DP58 116 aa13.37□□□□□ -0.27
RXRA-201ENST00000356384 OCC1Q8TAD7 63 aa13.37□□□□□ -0.27
RXRA-201ENST00000356384 SIGMAR1Q99720 223 aa13.37□□□□□ -0.27
RXRA-201ENST00000356384 AHCTF1Q8WYP5 2266 aa13.37□□□□□ -0.27
RXRA-201ENST00000356384 A0A1B0GTI1 187 aa13.37□□□□□ -0.27
RXRA-201ENST00000356384 NAPSAO96009 420 aa13.37□□□□□ -0.27
RXRA-201ENST00000356384 JPT2Q9H910 190 aa13.37□□□□□ -0.27
RXRA-201ENST00000356384 LOC285556D6RIA3 1793 aa13.36□□□□□ -0.27
RXRA-201ENST00000356384 DEFB104AQ8WTQ1 72 aa13.36□□□□□ -0.27
RXRA-201ENST00000356384 RNF126Q9BV68 326 aa13.36□□□□□ -0.27
RXRA-201ENST00000356384 KIF13BQ9NQT8 1826 aa13.36□□□□□ -0.27
RXRA-201ENST00000356384 PPBPP02775 128 aa13.36□□□□□ -0.27
RXRA-201ENST00000356384 C8orf46Q8TAG6 207 aa13.36□□□□□ -0.27
RXRA-201ENST00000356384 LINC00527Q9UJ94 153 aa13.36□□□□□ -0.27
RXRA-201ENST00000356384 CSRP2Q16527 193 aa13.36□□□□□ -0.27
RXRA-201ENST00000356384 PLXNA1Q9UIW2 1896 aa13.36□□□□□ -0.27
RXRA-201ENST00000356384 ZNF362Q5T0B9 420 aaPredicted RBP13.36□□□□□ -0.27
RXRA-201ENST00000356384 ATP5L2Q7Z4Y8 100 aa13.36□□□□□ -0.27
RXRA-201ENST00000356384 WBP1Q96G27 269 aa13.36□□□□□ -0.27
RXRA-201ENST00000356384 ERG28Q9UKR5 140 aa13.36□□□□□ -0.27
RXRA-201ENST00000356384 SPTBP11277 2137 aa13.36□□□□□ -0.27
RXRA-201ENST00000356384 TGFBR3LH3BV60 316 aa13.35□□□□□ -0.27
RXRA-201ENST00000356384 DTX2Q86UW9 622 aa13.35□□□□□ -0.27
RXRA-201ENST00000356384 IFI27L1Q96BM0 104 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms