RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 PINLYPA6NC86 204 aa9.4□□□□□ -0.9
FN1-204ENST00000356005 SRRM5B3KS81 715 aa9.4□□□□□ -0.9
FN1-204ENST00000356005 PTBP3O95758 552 aaKnown RBP9.4□□□□□ -0.9
FN1-204ENST00000356005 RNF151Q2KHN1 245 aa9.4□□□□□ -0.9
FN1-204ENST00000356005 ZNF585BQ52M93 769 aa9.4□□□□□ -0.9
FN1-204ENST00000356005 SIGLEC15Q6ZMC9 328 aa9.4□□□□□ -0.9
FN1-204ENST00000356005 CIARTQ8N365 385 aaPredicted RBP9.4□□□□□ -0.9
FN1-204ENST00000356005 GPR179Q6PRD1 2367 aa9.4□□□□□ -0.91
FN1-204ENST00000356005 UPK2O00526 184 aa9.4□□□□□ -0.91
FN1-204ENST00000356005 CD81P60033 236 aa9.4□□□□□ -0.91
FN1-204ENST00000356005 SIGIRRQ6IA17 410 aa9.4□□□□□ -0.91
FN1-204ENST00000356005 OR52E5Q8NH55 327 aa9.4□□□□□ -0.91
FN1-204ENST00000356005 TCF21O43680 179 aa9.4□□□□□ -0.91
FN1-204ENST00000356005 HEPN1Q6WQI6 88 aa9.4□□□□□ -0.91
FN1-204ENST00000356005 Q96MF0 132 aa9.4□□□□□ -0.91
FN1-204ENST00000356005 PRR14LQ5THK1 2151 aa9.39□□□□□ -0.91
FN1-204ENST00000356005 OVOL1O14753 267 aa9.39□□□□□ -0.91
FN1-204ENST00000356005 CD7P09564 240 aa9.39□□□□□ -0.91
FN1-204ENST00000356005 KLK2P20151 261 aa9.39□□□□□ -0.91
FN1-204ENST00000356005 RPUSD1Q9UJJ7 312 aaKnown RBP9.39□□□□□ -0.91
FN1-204ENST00000356005 M0R381 172 aa9.39□□□□□ -0.91
FN1-204ENST00000356005 CD74P04233 296 aa9.39□□□□□ -0.91
FN1-204ENST00000356005 SAA1P0DJI8 122 aaPredicted RBP9.39□□□□□ -0.91
FN1-204ENST00000356005 TMEM42Q69YG0 159 aa9.39□□□□□ -0.91
FN1-204ENST00000356005 PTPN13Q12923 2485 aa9.39□□□□□ -0.91
FN1-204ENST00000356005 H3BVH4 76 aa9.39□□□□□ -0.91
FN1-204ENST00000356005 UCP1P25874 307 aa9.39□□□□□ -0.91
FN1-204ENST00000356005 CACNG7P62955 275 aa9.39□□□□□ -0.91
FN1-204ENST00000356005 TNRC6AQ8NDV7 1962 aaKnown RBP9.39□□□□□ -0.91
FN1-204ENST00000356005 LBHQ53QV2 105 aaPredicted RBP9.39□□□□□ -0.91
FN1-204ENST00000356005 OR5AC2Q9NZP5 309 aa9.39□□□□□ -0.91
FN1-204ENST00000356005 EREGO14944 169 aa9.39□□□□□ -0.91
FN1-204ENST00000356005 PSCAO43653 123 aa9.39□□□□□ -0.91
FN1-204ENST00000356005 CCL1P22362 96 aa9.39□□□□□ -0.91
FN1-204ENST00000356005 Q0VFX4 171 aa9.39□□□□□ -0.91
FN1-204ENST00000356005 FAM131CQ96AQ9 280 aa9.39□□□□□ -0.91
FN1-204ENST00000356005 PPP1R3EQ9H7J1 279 aa9.39□□□□□ -0.91
FN1-204ENST00000356005 H3BUX3 64 aa9.39□□□□□ -0.91
FN1-204ENST00000356005 CRYBB3P26998 211 aa9.39□□□□□ -0.91
FN1-204ENST00000356005 GCHFRP30047 84 aa9.38□□□□□ -0.91
FN1-204ENST00000356005 REC114Q7Z4M0 266 aa9.38□□□□□ -0.91
FN1-204ENST00000356005 ZMAT4Q9H898 229 aa9.38□□□□□ -0.91
FN1-204ENST00000356005 IGHV1-8P0DP01 117 aa9.38□□□□□ -0.91
FN1-204ENST00000356005 SRSF8Q9BRL6 282 aaKnown RBP9.38□□□□□ -0.91
FN1-204ENST00000356005 BEX4Q9NWD9 120 aaPredicted RBP9.38□□□□□ -0.91
FN1-204ENST00000356005 SOX21Q9Y651 276 aaPredicted RBP9.38□□□□□ -0.91
FN1-204ENST00000356005 IFITM10A6NMD0 228 aa9.38□□□□□ -0.91
FN1-204ENST00000356005 SLC25A20O43772 301 aa9.38□□□□□ -0.91
FN1-204ENST00000356005 ATP5LO75964 103 aa9.38□□□□□ -0.91
FN1-204ENST00000356005 RPL29P47914 159 aaKnown RBP9.38□□□□□ -0.91
FN1-204ENST00000356005 HBBP68871 147 aa9.38□□□□□ -0.91
FN1-204ENST00000356005 RUNX1Q01196 453 aa9.38□□□□□ -0.91
FN1-204ENST00000356005 TPTE2P1Q5T6R2 138 aa9.38□□□□□ -0.91
FN1-204ENST00000356005 ZNF250P15622 560 aa9.38□□□□□ -0.91
FN1-204ENST00000356005 LCN12Q6JVE5 192 aa9.38□□□□□ -0.91
FN1-204ENST00000356005 WFDC6Q9BQY6 131 aa9.38□□□□□ -0.91
FN1-204ENST00000356005 ZNF256Q9Y2P7 627 aaPredicted RBP9.38□□□□□ -0.91
FN1-204ENST00000356005 TMEM200BQ69YZ2 307 aa9.38□□□□□ -0.91
FN1-204ENST00000356005 OR10S1Q8NGN2 331 aa9.38□□□□□ -0.91
FN1-204ENST00000356005 RNF125Q96EQ8 232 aa9.38□□□□□ -0.91
FN1-204ENST00000356005 LYNX1G3V0Z9 82 aa9.38□□□□□ -0.91
FN1-204ENST00000356005 SNRPCP09234 159 aaKnown RBP9.38□□□□□ -0.91
FN1-204ENST00000356005 LYNX1P0DP58 116 aa9.38□□□□□ -0.91
FN1-204ENST00000356005 FAM71F2Q6NXP2 309 aa9.38□□□□□ -0.91
FN1-204ENST00000356005 C11orf44Q8N8P7 122 aa9.38□□□□□ -0.91
FN1-204ENST00000356005 ZNF837Q96EG3 531 aaPredicted RBP9.38□□□□□ -0.91
FN1-204ENST00000356005 IGHV3OR16-13A0A075B7E8 117 aa9.37□□□□□ -0.91
FN1-204ENST00000356005 IGHV3-74A0A0B4J1X5 117 aa9.37□□□□□ -0.91
FN1-204ENST00000356005 TMEM144Q7Z5S9 345 aa9.37□□□□□ -0.91
FN1-204ENST00000356005 TP53RKQ96S44 253 aa9.37□□□□□ -0.91
FN1-204ENST00000356005 OTORQ9NRC9 128 aa9.37□□□□□ -0.91
FN1-204ENST00000356005 FABP5P3A8MUU1 101 aa9.37□□□□□ -0.91
FN1-204ENST00000356005 PSMG4Q5JS54 123 aa9.37□□□□□ -0.91
FN1-204ENST00000356005 NPCDR1Q9BY65 106 aa9.37□□□□□ -0.91
FN1-204ENST00000356005 RNASE1P07998 156 aaKnown RBP9.37□□□□□ -0.91
FN1-204ENST00000356005 SFRP2Q96HF1 295 aa9.37□□□□□ -0.91
FN1-204ENST00000356005 DMRTA2Q96SC8 542 aa9.37□□□□□ -0.91
FN1-204ENST00000356005 TRBV6-7A0A0A0MS04 114 aa9.37□□□□□ -0.91
FN1-204ENST00000356005 EIF3GO75821 320 aaKnown RBP eCLIP9.37□□□□□ -0.91
FN1-204ENST00000356005 LEPROTL1O95214 131 aa9.37□□□□□ -0.91
FN1-204ENST00000356005 C1QCP02747 245 aa9.37□□□□□ -0.91
FN1-204ENST00000356005 PMCHL1Q16048 86 aa9.37□□□□□ -0.91
FN1-204ENST00000356005 C12orf57Q99622 126 aa9.37□□□□□ -0.91
FN1-204ENST00000356005 BPESC1Q9GZL8 116 aa9.37□□□□□ -0.91
FN1-204ENST00000356005 RBM38Q9H0Z9 239 aaKnown RBP9.37□□□□□ -0.91
FN1-204ENST00000356005 LINC00862A6NCI5 91 aa9.37□□□□□ -0.91
FN1-204ENST00000356005 CNTFRP26992 372 aa9.37□□□□□ -0.91
FN1-204ENST00000356005 OR5AN1Q8NGI8 311 aa9.37□□□□□ -0.91
FN1-204ENST00000356005 COL4A4P53420 1690 aaPredicted RBP9.37□□□□□ -0.91
FN1-204ENST00000356005 A0A1B0GUT8 65 aa9.37□□□□□ -0.91
FN1-204ENST00000356005 CXorf65A6NEN9 183 aa9.37□□□□□ -0.91
FN1-204ENST00000356005 PEX7O00628 323 aa9.37□□□□□ -0.91
FN1-204ENST00000356005 SLC25A48Q6ZT89 311 aaKnown RBP9.37□□□□□ -0.91
FN1-204ENST00000356005 PIP4P1Q86T03 277 aa9.37□□□□□ -0.91
FN1-204ENST00000356005 ZCCHC24Q8N2G6 241 aaKnown RBP9.37□□□□□ -0.91
FN1-204ENST00000356005 SPG11Q96JI7 2443 aa9.37□□□□□ -0.91
FN1-204ENST00000356005 C1QTNF9BB2RNN3 333 aa9.36□□□□□ -0.91
FN1-204ENST00000356005 RNF223E7ERA6 249 aa9.36□□□□□ -0.91
FN1-204ENST00000356005 C1QTNF9P0C862 333 aa9.36□□□□□ -0.91
FN1-204ENST00000356005 NR2C2APQ86WQ0 139 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms