RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 CYB5BO43169 146 aa10.73□□□□□ -0.69
HOXA1-202ENST00000355633 MT-CO2P00403 227 aa10.73□□□□□ -0.69
HOXA1-202ENST00000355633 ACSM6Q6P461 480 aa10.73□□□□□ -0.69
HOXA1-202ENST00000355633 DPPA3Q6W0C5 159 aa10.73□□□□□ -0.69
HOXA1-202ENST00000355633 COMMD7Q86VX2 200 aa10.73□□□□□ -0.69
HOXA1-202ENST00000355633 LINC00518Q8N0U6 118 aa10.73□□□□□ -0.69
HOXA1-202ENST00000355633 OR5T1Q8NG75 326 aa10.73□□□□□ -0.69
HOXA1-202ENST00000355633 KCNIP2Q9NS61 270 aa10.73□□□□□ -0.69
HOXA1-202ENST00000355633 TNFRSF19Q9NS68 423 aa10.73□□□□□ -0.69
HOXA1-202ENST00000355633 MED9Q9NWA0 146 aa10.73□□□□□ -0.69
HOXA1-202ENST00000355633 IGKV1OR2-108A0A075B7D4 117 aa10.72□□□□□ -0.69
HOXA1-202ENST00000355633 IGHV3-21A0A0B4J1V1 117 aa10.72□□□□□ -0.69
HOXA1-202ENST00000355633 TEX46H3BTG2 121 aa10.72□□□□□ -0.69
HOXA1-202ENST00000355633 SOX15O60248 233 aa10.72□□□□□ -0.69
HOXA1-202ENST00000355633 S100A6P06703 90 aa10.72□□□□□ -0.69
HOXA1-202ENST00000355633 RND2P52198 227 aa10.72□□□□□ -0.69
HOXA1-202ENST00000355633 TMEM41BQ5BJD5 291 aa10.72□□□□□ -0.69
HOXA1-202ENST00000355633 FAM110DQ8TAY7 271 aaPredicted RBP10.72□□□□□ -0.69
HOXA1-202ENST00000355633 NPIPB3Q92617 1050 aa10.72□□□□□ -0.69
HOXA1-202ENST00000355633 HRH4Q9H3N8 390 aa10.72□□□□□ -0.69
HOXA1-202ENST00000355633 RPRMQ9NS64 109 aa10.72□□□□□ -0.69
HOXA1-202ENST00000355633 MRPL36Q9P0J6 103 aaKnown RBP10.72□□□□□ -0.69
HOXA1-202ENST00000355633 VPREB3Q9UKI3 123 aa10.72□□□□□ -0.69
HOXA1-202ENST00000355633 IGLV11-55A0A075B6I3 123 aa10.72□□□□□ -0.69
HOXA1-202ENST00000355633 I3L2K1 104 aa10.72□□□□□ -0.69
HOXA1-202ENST00000355633 MBP02144 154 aa10.72□□□□□ -0.69
HOXA1-202ENST00000355633 AKIRIN2Q53H80 203 aa10.72□□□□□ -0.69
HOXA1-202ENST00000355633 MIC13Q5XKP0 118 aa10.72□□□□□ -0.69
HOXA1-202ENST00000355633 SLC35E3Q7Z769 313 aa10.72□□□□□ -0.69
HOXA1-202ENST00000355633 FANCD2OSQ96PS1 177 aa10.72□□□□□ -0.69
HOXA1-202ENST00000355633 PXMP4Q9Y6I8 212 aa10.72□□□□□ -0.69
HOXA1-202ENST00000355633 PCP4L1A6NKN8 68 aa10.71□□□□□ -0.69
HOXA1-202ENST00000355633 G3V318 75 aa10.71□□□□□ -0.69
HOXA1-202ENST00000355633 HOXA3O43365 443 aaPredicted RBP10.71□□□□□ -0.69
HOXA1-202ENST00000355633 TSPAN15O95858 294 aa10.71□□□□□ -0.69
HOXA1-202ENST00000355633 IGHG2P01859 326 aa10.71□□□□□ -0.69
HOXA1-202ENST00000355633 HNF1AP20823 631 aa10.71□□□□□ -0.69
HOXA1-202ENST00000355633 OR10J1P30954 320 aa10.71□□□□□ -0.69
HOXA1-202ENST00000355633 RPL29P47914 159 aaKnown RBP10.71□□□□□ -0.69
HOXA1-202ENST00000355633 RAB2AP61019 212 aa10.71□□□□□ -0.69
HOXA1-202ENST00000355633 BLCAPP62952 87 aa10.71□□□□□ -0.69
HOXA1-202ENST00000355633 TMEM116Q8NCL8 245 aa10.71□□□□□ -0.69
HOXA1-202ENST00000355633 THYN1Q9P016 225 aa10.71□□□□□ -0.69
HOXA1-202ENST00000355633 FLNAP21333 2647 aaKnown RBP10.71□□□□□ -0.7
HOXA1-202ENST00000355633 TEX15Q9BXT5 2789 aa10.71□□□□□ -0.7
HOXA1-202ENST00000355633 K7EIM0 57 aa10.7□□□□□ -0.7
HOXA1-202ENST00000355633 CRIP2P52943 208 aaPredicted RBP10.7□□□□□ -0.7
HOXA1-202ENST00000355633 ACOT6Q3I5F7 207 aaPredicted RBP10.7□□□□□ -0.7
HOXA1-202ENST00000355633 THAP8Q8NA92 274 aa10.7□□□□□ -0.7
HOXA1-202ENST00000355633 SLC45A2Q9UMX9 530 aa10.7□□□□□ -0.7
HOXA1-202ENST00000355633 ZFHX3Q15911 3703 aa10.7□□□□□ -0.7
HOXA1-202ENST00000355633 TRAV41A0A0B4J266 112 aa10.7□□□□□ -0.7
HOXA1-202ENST00000355633 ZFP92A6NM28 416 aa10.7□□□□□ -0.7
HOXA1-202ENST00000355633 IGF1P05019 195 aa10.7□□□□□ -0.7
HOXA1-202ENST00000355633 H2AFB1P0C5Y9 115 aa10.7□□□□□ -0.7
HOXA1-202ENST00000355633 STPG3Q8N7X2 389 aa10.7□□□□□ -0.7
HOXA1-202ENST00000355633 SIGLECL1Q8N7X8 197 aa10.7□□□□□ -0.7
HOXA1-202ENST00000355633 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.7□□□□□ -0.7
HOXA1-202ENST00000355633 OR10G4Q8NGN3 311 aa10.7□□□□□ -0.7
HOXA1-202ENST00000355633 OR10G9Q8NGN4 311 aa10.7□□□□□ -0.7
HOXA1-202ENST00000355633 OR10G7Q8NGN6 311 aa10.7□□□□□ -0.7
HOXA1-202ENST00000355633 LYPD6BQ8NI32 183 aa10.7□□□□□ -0.7
HOXA1-202ENST00000355633 HIST1H1BP16401 226 aaKnown RBP10.69□□□□□ -0.7
HOXA1-202ENST00000355633 PRR20EP86478 221 aa10.69□□□□□ -0.7
HOXA1-202ENST00000355633 PRR20CP86479 221 aa10.69□□□□□ -0.7
HOXA1-202ENST00000355633 PRR20DP86480 221 aa10.69□□□□□ -0.7
HOXA1-202ENST00000355633 PRR20BP86481 221 aa10.69□□□□□ -0.7
HOXA1-202ENST00000355633 PRR20AP86496 221 aa10.69□□□□□ -0.7
HOXA1-202ENST00000355633 CYP2G1PQ6ZSU1 146 aa10.69□□□□□ -0.7
HOXA1-202ENST00000355633 BPIFCQ8NFQ6 507 aa10.69□□□□□ -0.7
HOXA1-202ENST00000355633 OR4X1Q8NH49 305 aa10.69□□□□□ -0.7
HOXA1-202ENST00000355633 RCC1LQ96I51 464 aaKnown RBP10.69□□□□□ -0.7
HOXA1-202ENST00000355633 SLC39A9Q9NUM3 307 aa10.69□□□□□ -0.7
HOXA1-202ENST00000355633 LINC00527Q9UJ94 153 aa10.69□□□□□ -0.7
HOXA1-202ENST00000355633 AKAP9Q99996 3911 aa10.69□□□□□ -0.7
HOXA1-202ENST00000355633 IGKV1D-37A0A075B6S9 117 aa10.68□□□□□ -0.7
HOXA1-202ENST00000355633 OR2J3O76001 311 aa10.68□□□□□ -0.7
HOXA1-202ENST00000355633 YIF1AO95070 293 aa10.68□□□□□ -0.7
HOXA1-202ENST00000355633 C19orf54Q5BKX5 351 aa10.68□□□□□ -0.7
HOXA1-202ENST00000355633 ZNF600Q6ZNG1 722 aa10.68□□□□□ -0.7
HOXA1-202ENST00000355633 Q6ZS46 218 aa10.68□□□□□ -0.7
HOXA1-202ENST00000355633 RPP25LQ8N5L8 163 aaKnown RBP10.68□□□□□ -0.7
HOXA1-202ENST00000355633 MARC2Q969Z3 335 aa10.68□□□□□ -0.7
HOXA1-202ENST00000355633 ZNF355PQ9NSJ1 428 aa10.68□□□□□ -0.7
HOXA1-202ENST00000355633 TCRBV4S1A1TA0A5B7 111 aa10.68□□□□□ -0.7
HOXA1-202ENST00000355633 AP4M1O00189 453 aa10.68□□□□□ -0.7
HOXA1-202ENST00000355633 NDUFB8O95169 186 aa10.68□□□□□ -0.7
HOXA1-202ENST00000355633 LINC00869P0C866 280 aa10.68□□□□□ -0.7
HOXA1-202ENST00000355633 ZNF726P1Q15940 193 aa10.68□□□□□ -0.7
HOXA1-202ENST00000355633 KLK9Q2XQG4 91 aa10.68□□□□□ -0.7
HOXA1-202ENST00000355633 GCSAMLQ5JQS6 135 aa10.68□□□□□ -0.7
HOXA1-202ENST00000355633 IL34Q6ZMJ4 242 aa10.68□□□□□ -0.7
HOXA1-202ENST00000355633 SFT2D1Q8WV19 159 aa10.68□□□□□ -0.7
HOXA1-202ENST00000355633 SMR3AQ99954 134 aa10.68□□□□□ -0.7
HOXA1-202ENST00000355633 ACTR3CQ9C0K3 210 aaPredicted RBP10.68□□□□□ -0.7
HOXA1-202ENST00000355633 TMEM160Q9NX00 188 aa10.68□□□□□ -0.7
HOXA1-202ENST00000355633 FBXL7Q9UJT9 491 aa10.68□□□□□ -0.7
HOXA1-202ENST00000355633 KLK9Q9UKQ9 250 aa10.68□□□□□ -0.7
HOXA1-202ENST00000355633 A0A1B0GV50 99 aa10.67□□□□□ -0.7
HOXA1-202ENST00000355633 MFSD2BA6NFX1 497 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms