RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 FAM87AP0C7U9 286 aa6.42□□□□□ -1.38
CD46-203ENST00000354848 CRYBA4P53673 196 aa6.42□□□□□ -1.38
CD46-203ENST00000354848 FOXG1P55316 489 aaPredicted RBP6.42□□□□□ -1.38
CD46-203ENST00000354848 OR1C1Q15619 314 aa6.42□□□□□ -1.38
CD46-203ENST00000354848 CCDC144NLQ6NUI1 221 aa6.42□□□□□ -1.38
CD46-203ENST00000354848 ZNF784Q8NCA9 323 aaPredicted RBP6.42□□□□□ -1.38
CD46-203ENST00000354848 FAM234AQ9H0X4 552 aa6.42□□□□□ -1.38
CD46-203ENST00000354848 C7orf69Q9H7B7 122 aa6.42□□□□□ -1.38
CD46-203ENST00000354848 PLSCR4Q9NRQ2 329 aa6.42□□□□□ -1.38
CD46-203ENST00000354848 ZNF257Q9Y2Q1 563 aa6.42□□□□□ -1.38
CD46-203ENST00000354848 LOXL2Q9Y4K0 774 aa6.42□□□□□ -1.38
CD46-203ENST00000354848 IGKV1OR2-108A0A075B7D4 117 aa6.41□□□□□ -1.38
CD46-203ENST00000354848 NCR2O95944 276 aa6.41□□□□□ -1.38
CD46-203ENST00000354848 FTH1P19P0C7X4 201 aa6.41□□□□□ -1.38
CD46-203ENST00000354848 FABP2P12104 132 aa6.41□□□□□ -1.38
CD46-203ENST00000354848 ZNF788Q6ZQV5 615 aa6.41□□□□□ -1.38
CD46-203ENST00000354848 SLC25A33Q9BSK2 321 aa6.41□□□□□ -1.38
CD46-203ENST00000354848 TMUB1Q9BVT8 246 aa6.41□□□□□ -1.38
CD46-203ENST00000354848 DYSFO75923 2080 aa6.41□□□□□ -1.38
CD46-203ENST00000354848 SPAARA0A1B0GVQ0 90 aa6.41□□□□□ -1.38
CD46-203ENST00000354848 SCRG1O75711 98 aa6.41□□□□□ -1.38
CD46-203ENST00000354848 IGLV3-19P01714 112 aa6.41□□□□□ -1.38
CD46-203ENST00000354848 ADH4P08319 380 aa6.41□□□□□ -1.38
CD46-203ENST00000354848 C8orf88P0DMB2 117 aa6.41□□□□□ -1.38
CD46-203ENST00000354848 ZNF137PP52743 207 aa6.41□□□□□ -1.38
CD46-203ENST00000354848 ADAMTSL5Q6ZMM2 481 aa6.41□□□□□ -1.38
CD46-203ENST00000354848 MOB3BQ86TA1 216 aa6.41□□□□□ -1.38
CD46-203ENST00000354848 BOD1L2Q8IYS8 172 aa6.41□□□□□ -1.38
CD46-203ENST00000354848 RFESDQ8TAC1 157 aa6.41□□□□□ -1.38
CD46-203ENST00000354848 TMEM140Q9NV12 185 aa6.41□□□□□ -1.38
CD46-203ENST00000354848 MC5RP33032 325 aa6.4□□□□□ -1.38
CD46-203ENST00000354848 ERVK-16P61578 105 aa6.4□□□□□ -1.38
CD46-203ENST00000354848 MORN5Q5VZ52 161 aa6.4□□□□□ -1.38
CD46-203ENST00000354848 TMEM116Q8NCL8 245 aa6.4□□□□□ -1.38
CD46-203ENST00000354848 NEU4Q8WWR8 484 aaPredicted RBP6.4□□□□□ -1.38
CD46-203ENST00000354848 DPF1Q92782 380 aa6.4□□□□□ -1.38
CD46-203ENST00000354848 COQ2Q96H96 371 aa6.4□□□□□ -1.38
CD46-203ENST00000354848 NDFIP1Q9BT67 221 aa6.4□□□□□ -1.38
CD46-203ENST00000354848 AKIRIN1Q9H9L7 192 aaPredicted RBP6.4□□□□□ -1.38
CD46-203ENST00000354848 POLDIP2Q9Y2S7 368 aa6.4□□□□□ -1.38
CD46-203ENST00000354848 TRAV5A0A0B4J249 113 aa6.4□□□□□ -1.38
CD46-203ENST00000354848 A0A1W2PR77 199 aa6.4□□□□□ -1.38
CD46-203ENST00000354848 A1L4Q6 167 aa6.4□□□□□ -1.38
CD46-203ENST00000354848 PEX7O00628 323 aa6.4□□□□□ -1.38
CD46-203ENST00000354848 ZNF207O43670 478 aaKnown RBP6.4□□□□□ -1.38
CD46-203ENST00000354848 MRPL33O75394 65 aaKnown RBP6.4□□□□□ -1.38
CD46-203ENST00000354848 CSN3P07498 182 aa6.4□□□□□ -1.38
CD46-203ENST00000354848 UBE2L3P68036 154 aaKnown RBP6.4□□□□□ -1.38
CD46-203ENST00000354848 SAMD5Q5TGI4 173 aa6.4□□□□□ -1.38
CD46-203ENST00000354848 STXBP6Q8NFX7 210 aa6.4□□□□□ -1.38
CD46-203ENST00000354848 ZNF296Q8WUU4 475 aaPredicted RBP6.4□□□□□ -1.38
CD46-203ENST00000354848 GTSF1Q8WW33 167 aa6.4□□□□□ -1.38
CD46-203ENST00000354848 ADTRPQ96IZ2 230 aa6.4□□□□□ -1.38
CD46-203ENST00000354848 ZNF48Q96MX3 618 aaPredicted RBP6.4□□□□□ -1.38
CD46-203ENST00000354848 ZNF747Q9BV97 191 aa6.4□□□□□ -1.38
CD46-203ENST00000354848 RTL8AQ9BWD3 113 aa6.4□□□□□ -1.38
CD46-203ENST00000354848 SDK1Q7Z5N4 2213 aa6.4□□□□□ -1.39
CD46-203ENST00000354848 KLK10O43240 276 aa6.4□□□□□ -1.39
CD46-203ENST00000354848 GPR12P47775 334 aa6.4□□□□□ -1.39
CD46-203ENST00000354848 PCOLCEQ15113 449 aa6.4□□□□□ -1.39
CD46-203ENST00000354848 FA2HQ7L5A8 372 aa6.4□□□□□ -1.39
CD46-203ENST00000354848 FAM167A-AS1Q96KT0 104 aa6.4□□□□□ -1.39
CD46-203ENST00000354848 PGLYRP4Q96LB8 373 aa6.4□□□□□ -1.39
CD46-203ENST00000354848 SPATA25Q9BR10 227 aa6.4□□□□□ -1.39
CD46-203ENST00000354848 SLC25A2Q9BXI2 301 aa6.4□□□□□ -1.39
CD46-203ENST00000354848 KLF13Q9Y2Y9 288 aaPredicted RBP6.4□□□□□ -1.39
CD46-203ENST00000354848 DOCK10Q96BY6 2186 aa6.4□□□□□ -1.39
CD46-203ENST00000354848 FBLL1A6NHQ2 334 aaKnown RBP6.39□□□□□ -1.39
CD46-203ENST00000354848 C15orf61A6NNL5 157 aa6.39□□□□□ -1.39
CD46-203ENST00000354848 C2CD4DB7Z1M9 353 aa6.39□□□□□ -1.39
CD46-203ENST00000354848 FNDC10F2Z333 226 aa6.39□□□□□ -1.39
CD46-203ENST00000354848 MGST3O14880 152 aa6.39□□□□□ -1.39
CD46-203ENST00000354848 SMAD7O15105 426 aaKnown RBP6.39□□□□□ -1.39
CD46-203ENST00000354848 LINC01565O15544 149 aa6.39□□□□□ -1.39
CD46-203ENST00000354848 TFF1P04155 84 aa6.39□□□□□ -1.39
CD46-203ENST00000354848 TCTAP57738 103 aa6.39□□□□□ -1.39
CD46-203ENST00000354848 HOXA4Q00056 320 aaPredicted RBP6.39□□□□□ -1.39
CD46-203ENST00000354848 LTC4SQ16873 150 aa6.39□□□□□ -1.39
CD46-203ENST00000354848 TMEM240Q5SV17 173 aa6.39□□□□□ -1.39
CD46-203ENST00000354848 ACP7Q6ZNF0 438 aa6.39□□□□□ -1.39
CD46-203ENST00000354848 ZNF329Q86UD4 541 aa6.39□□□□□ -1.39
CD46-203ENST00000354848 PIP4P2Q8N4L2 257 aa6.39□□□□□ -1.39
CD46-203ENST00000354848 OR9G4Q8NGQ1 327 aa6.39□□□□□ -1.39
CD46-203ENST00000354848 OR13A1Q8NGR1 328 aa6.39□□□□□ -1.39
CD46-203ENST00000354848 ABHD17AQ96GS6 310 aa6.39□□□□□ -1.39
CD46-203ENST00000354848 C19orf24Q9BVV8 132 aa6.39□□□□□ -1.39
CD46-203ENST00000354848 KNTC1P50748 2209 aa6.39□□□□□ -1.39
CD46-203ENST00000354848 PYYP10082 97 aa6.39□□□□□ -1.39
CD46-203ENST00000354848 FCGR2BP31994 310 aaPredicted RBP6.39□□□□□ -1.39
CD46-203ENST00000354848 SSR4P51571 173 aa6.39□□□□□ -1.39
CD46-203ENST00000354848 TCTEX1D4Q5JR98 221 aa6.39□□□□□ -1.39
CD46-203ENST00000354848 TIMM23BQ5SRD1 257 aa6.39□□□□□ -1.39
CD46-203ENST00000354848 LINC00322Q6ZN03 302 aaPredicted RBP6.39□□□□□ -1.39
CD46-203ENST00000354848 FOXI2Q6ZQN5 318 aa6.39□□□□□ -1.39
CD46-203ENST00000354848 BLNKQ8WV28 456 aa6.39□□□□□ -1.39
CD46-203ENST00000354848 BADQ92934 168 aa6.39□□□□□ -1.39
CD46-203ENST00000354848 RPP21Q9H633 154 aaKnown RBP6.39□□□□□ -1.39
CD46-203ENST00000354848 INSIG2Q9Y5U4 225 aa6.39□□□□□ -1.39
CD46-203ENST00000354848 SOX21Q9Y651 276 aaPredicted RBP6.39□□□□□ -1.39
CD46-203ENST00000354848 TNCP24821 2201 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms