RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 ATG12O94817 140 aa10.55□□□□□ -0.72
PRPF40A-201ENST00000354363 HOXA1P49639 335 aaPredicted RBP10.55□□□□□ -0.72
PRPF40A-201ENST00000354363 PPP5CP53041 499 aa10.55□□□□□ -0.72
PRPF40A-201ENST00000354363 TMEM187Q14656 261 aa10.55□□□□□ -0.72
PRPF40A-201ENST00000354363 MLANAQ16655 118 aa10.55□□□□□ -0.72
PRPF40A-201ENST00000354363 SP6Q3SY56 376 aa10.55□□□□□ -0.72
PRPF40A-201ENST00000354363 MZT2AQ6P582 158 aa10.55□□□□□ -0.72
PRPF40A-201ENST00000354363 TMEM231Q9H6L2 316 aa10.55□□□□□ -0.72
PRPF40A-201ENST00000354363 MTFP1Q9UDX5 166 aa10.55□□□□□ -0.72
PRPF40A-201ENST00000354363 CLN5O75503 358 aa10.55□□□□□ -0.72
PRPF40A-201ENST00000354363 IFNA4P05014 189 aa10.55□□□□□ -0.72
PRPF40A-201ENST00000354363 TBPP20226 339 aa10.55□□□□□ -0.72
PRPF40A-201ENST00000354363 NPPCP23582 126 aa10.55□□□□□ -0.72
PRPF40A-201ENST00000354363 UCP1P25874 307 aa10.55□□□□□ -0.72
PRPF40A-201ENST00000354363 TRIM16LQ309B1 348 aa10.55□□□□□ -0.72
PRPF40A-201ENST00000354363 STHQ8IWL8 128 aa10.55□□□□□ -0.72
PRPF40A-201ENST00000354363 OR4D10Q8NGI6 311 aa10.55□□□□□ -0.72
PRPF40A-201ENST00000354363 OR4X1Q8NH49 305 aa10.55□□□□□ -0.72
PRPF40A-201ENST00000354363 ENY2Q9NPA8 101 aa10.55□□□□□ -0.72
PRPF40A-201ENST00000354363 COPZ2Q9P299 210 aa10.55□□□□□ -0.72
PRPF40A-201ENST00000354363 RABAC1Q9UI14 185 aa10.55□□□□□ -0.72
PRPF40A-201ENST00000354363 A0A1W2PS18 150 aa10.54□□□□□ -0.72
PRPF40A-201ENST00000354363 K7EQG2 157 aa10.54□□□□□ -0.72
PRPF40A-201ENST00000354363 CRYBB3P26998 211 aa10.54□□□□□ -0.72
PRPF40A-201ENST00000354363 OPRK1P41145 380 aa10.54□□□□□ -0.72
PRPF40A-201ENST00000354363 RPL5P46777 297 aaKnown RBP10.54□□□□□ -0.72
PRPF40A-201ENST00000354363 BSXQ3C1V8 233 aa10.54□□□□□ -0.72
PRPF40A-201ENST00000354363 CCDC71LQ8N9Z2 235 aa10.54□□□□□ -0.72
PRPF40A-201ENST00000354363 OR13C8Q8NGS7 320 aa10.54□□□□□ -0.72
PRPF40A-201ENST00000354363 TERB2Q8NHR7 220 aa10.54□□□□□ -0.72
PRPF40A-201ENST00000354363 ZFAND1Q8TCF1 268 aa10.54□□□□□ -0.72
PRPF40A-201ENST00000354363 METTL26Q96S19 204 aa10.54□□□□□ -0.72
PRPF40A-201ENST00000354363 NAA50Q9GZZ1 169 aaKnown RBP10.54□□□□□ -0.72
PRPF40A-201ENST00000354363 EXTL2Q9UBQ6 330 aa10.54□□□□□ -0.72
PRPF40A-201ENST00000354363 CD74P04233 296 aa10.53□□□□□ -0.72
PRPF40A-201ENST00000354363 GIG44P09565 113 aaPredicted RBP10.53□□□□□ -0.72
PRPF40A-201ENST00000354363 Q6ZRM9 215 aa10.53□□□□□ -0.72
PRPF40A-201ENST00000354363 STXBP6Q8NFX7 210 aa10.53□□□□□ -0.72
PRPF40A-201ENST00000354363 RRNAD1Q96FB5 475 aaKnown RBP10.53□□□□□ -0.72
PRPF40A-201ENST00000354363 ABHD1Q96SE0 405 aa10.53□□□□□ -0.72
PRPF40A-201ENST00000354363 IGKV1-17P01599 117 aa10.52□□□□□ -0.73
PRPF40A-201ENST00000354363 ZNF182P17025 639 aaPredicted RBP10.52□□□□□ -0.73
PRPF40A-201ENST00000354363 P2RY1P47900 373 aa10.52□□□□□ -0.73
PRPF40A-201ENST00000354363 CTF1Q16619 201 aa10.52□□□□□ -0.73
PRPF40A-201ENST00000354363 TIGITQ495A1 244 aa10.52□□□□□ -0.73
PRPF40A-201ENST00000354363 SCGB2B2Q4G0G5 96 aa10.52□□□□□ -0.73
PRPF40A-201ENST00000354363 TRPT1Q86TN4 253 aaKnown RBP10.52□□□□□ -0.73
PRPF40A-201ENST00000354363 Q8NAQ8 132 aa10.52□□□□□ -0.73
PRPF40A-201ENST00000354363 TMEM229BQ8NBD8 167 aa10.52□□□□□ -0.73
PRPF40A-201ENST00000354363 RNASE11Q8TAA1 199 aaKnown RBP10.52□□□□□ -0.73
PRPF40A-201ENST00000354363 MARCH1Q8TCQ1 289 aa10.52□□□□□ -0.73
PRPF40A-201ENST00000354363 C2CD4CQ8TF44 421 aa10.52□□□□□ -0.73
PRPF40A-201ENST00000354363 AP3S1Q92572 193 aa10.52□□□□□ -0.73
PRPF40A-201ENST00000354363 TMEM230Q96A57 120 aa10.52□□□□□ -0.73
PRPF40A-201ENST00000354363 GRAMD2BQ96HH9 432 aa10.52□□□□□ -0.73
PRPF40A-201ENST00000354363 B3GALNT1O75752 331 aa10.51□□□□□ -0.73
PRPF40A-201ENST00000354363 GABARAPO95166 117 aa10.51□□□□□ -0.73
PRPF40A-201ENST00000354363 RAB3DO95716 219 aa10.51□□□□□ -0.73
PRPF40A-201ENST00000354363 TAS2R19P59542 299 aa10.51□□□□□ -0.73
PRPF40A-201ENST00000354363 SPCS3P61009 180 aa10.51□□□□□ -0.73
PRPF40A-201ENST00000354363 AARDQ4LEZ3 155 aa10.51□□□□□ -0.73
PRPF40A-201ENST00000354363 TRAV30A0A087WSZ9 112 aa10.51□□□□□ -0.73
PRPF40A-201ENST00000354363 KNCNA6PVL3 124 aa10.51□□□□□ -0.73
PRPF40A-201ENST00000354363 SCGB2A1O75556 95 aa10.51□□□□□ -0.73
PRPF40A-201ENST00000354363 OR5AC1P0C628 307 aa10.51□□□□□ -0.73
PRPF40A-201ENST00000354363 ZNF688P0C7X2 276 aa10.51□□□□□ -0.73
PRPF40A-201ENST00000354363 PRR20EP86478 221 aa10.51□□□□□ -0.73
PRPF40A-201ENST00000354363 PRR20CP86479 221 aa10.51□□□□□ -0.73
PRPF40A-201ENST00000354363 PRR20DP86480 221 aa10.51□□□□□ -0.73
PRPF40A-201ENST00000354363 PRR20BP86481 221 aa10.51□□□□□ -0.73
PRPF40A-201ENST00000354363 PRR20AP86496 221 aa10.51□□□□□ -0.73
PRPF40A-201ENST00000354363 FAM219AQ8IW50 185 aa10.51□□□□□ -0.73
PRPF40A-201ENST00000354363 OR52E5Q8NH55 327 aa10.51□□□□□ -0.73
PRPF40A-201ENST00000354363 LHFPL5Q8TAF8 219 aa10.51□□□□□ -0.73
PRPF40A-201ENST00000354363 DCANP1Q8TF63 244 aa10.51□□□□□ -0.73
PRPF40A-201ENST00000354363 TMEM222Q9H0R3 208 aa10.51□□□□□ -0.73
PRPF40A-201ENST00000354363 U3KQE9 123 aa10.51□□□□□ -0.73
PRPF40A-201ENST00000354363 RPS10-NUDT3A0A1W2PQS6 291 aa10.5□□□□□ -0.73
PRPF40A-201ENST00000354363 CDS2O95674 445 aa10.5□□□□□ -0.73
PRPF40A-201ENST00000354363 RBMY1A1P0DJD3 496 aaKnown RBP10.5□□□□□ -0.73
PRPF40A-201ENST00000354363 RBMY1CP0DJD4 496 aa10.5□□□□□ -0.73
PRPF40A-201ENST00000354363 SPP1P10451 314 aa10.5□□□□□ -0.73
PRPF40A-201ENST00000354363 C4BPBP20851 252 aa10.5□□□□□ -0.73
PRPF40A-201ENST00000354363 HTR2BP41595 481 aa10.5□□□□□ -0.73
PRPF40A-201ENST00000354363 TCTAP57738 103 aa10.5□□□□□ -0.73
PRPF40A-201ENST00000354363 RBMY1FQ15415 496 aaKnown RBP10.5□□□□□ -0.73
PRPF40A-201ENST00000354363 TMEM41BQ5BJD5 291 aa10.5□□□□□ -0.73
PRPF40A-201ENST00000354363 STEAP1BQ6NZ63 245 aa10.5□□□□□ -0.73
PRPF40A-201ENST00000354363 MORN3Q6PF18 240 aaPredicted RBP10.5□□□□□ -0.73
PRPF40A-201ENST00000354363 GLYATL2Q8WU03 294 aa10.5□□□□□ -0.73
PRPF40A-201ENST00000354363 C15orf40Q8WUR7 153 aa10.5□□□□□ -0.73
PRPF40A-201ENST00000354363 NARS2Q96I59 477 aaKnown RBP10.5□□□□□ -0.73
PRPF40A-201ENST00000354363 RTBDNQ9BSG5 229 aaPredicted RBP10.5□□□□□ -0.73
PRPF40A-201ENST00000354363 HRH4Q9H3N8 390 aa10.5□□□□□ -0.73
PRPF40A-201ENST00000354363 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.5□□□□□ -0.73
PRPF40A-201ENST00000354363 IGHV4-28A0A0C4DH34 117 aa10.49□□□□□ -0.73
PRPF40A-201ENST00000354363 GABARAPH6UMI1 98 aa10.49□□□□□ -0.73
PRPF40A-201ENST00000354363 IGLC1P0CG04 106 aa10.49□□□□□ -0.73
PRPF40A-201ENST00000354363 FAAP20Q6NZ36 180 aa10.49□□□□□ -0.73
PRPF40A-201ENST00000354363 PRSS54Q6PEW0 395 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms