RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 MBNL3Q9NUK0 354 aaKnown RBP12.18□□□□□ -0.46
NUP50-201ENST00000347635 LOC102724200A0A096LPH7 203 aaPredicted RBP12.18□□□□□ -0.46
NUP50-201ENST00000347635 OR4C46A6NHA9 309 aa12.18□□□□□ -0.46
NUP50-201ENST00000347635 LY6DQ14210 128 aa12.18□□□□□ -0.46
NUP50-201ENST00000347635 FAM169BQ8N8A8 192 aa12.18□□□□□ -0.46
NUP50-201ENST00000347635 RNF138Q8WVD3 245 aa12.18□□□□□ -0.46
NUP50-201ENST00000347635 DPF1Q92782 380 aa12.18□□□□□ -0.46
NUP50-201ENST00000347635 PRDM13Q9H4Q3 707 aa12.18□□□□□ -0.46
NUP50-201ENST00000347635 METRNQ9UJH8 293 aa12.18□□□□□ -0.46
NUP50-201ENST00000347635 NTF4P34130 210 aa12.18□□□□□ -0.46
NUP50-201ENST00000347635 UQCRFS1P47985 274 aa12.18□□□□□ -0.46
NUP50-201ENST00000347635 CD177Q8N6Q3 437 aa12.18□□□□□ -0.46
NUP50-201ENST00000347635 IGHV1-18A0A0C4DH31 117 aa12.17□□□□□ -0.46
NUP50-201ENST00000347635 A6NNC1 897 aa12.17□□□□□ -0.46
NUP50-201ENST00000347635 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.17□□□□□ -0.46
NUP50-201ENST00000347635 LINC00312Q9Y6C7 94 aa12.17□□□□□ -0.46
NUP50-201ENST00000347635 LY96Q9Y6Y9 160 aa12.17□□□□□ -0.46
NUP50-201ENST00000347635 SDK2Q58EX2 2172 aa12.17□□□□□ -0.46
NUP50-201ENST00000347635 GAGE10A6NGK3 116 aa12.17□□□□□ -0.46
NUP50-201ENST00000347635 SMIM17P0DL12 118 aa12.17□□□□□ -0.46
NUP50-201ENST00000347635 TCF15Q12870 199 aa12.17□□□□□ -0.46
NUP50-201ENST00000347635 TRAV3A0A0B4J244 114 aa12.17□□□□□ -0.46
NUP50-201ENST00000347635 OR2T8A6NH00 312 aa12.17□□□□□ -0.46
NUP50-201ENST00000347635 GOSR1O95249 250 aa12.17□□□□□ -0.46
NUP50-201ENST00000347635 Q6ZSR3 168 aa12.17□□□□□ -0.46
NUP50-201ENST00000347635 GPR179Q6PRD1 2367 aa12.17□□□□□ -0.46
NUP50-201ENST00000347635 LINC00205P59089 165 aa12.17□□□□□ -0.46
NUP50-201ENST00000347635 RPL24P83731 157 aaKnown RBP12.16□□□□□ -0.46
NUP50-201ENST00000347635 CD69Q07108 199 aa12.16□□□□□ -0.46
NUP50-201ENST00000347635 MBNL2Q5VZF2 373 aaKnown RBP12.16□□□□□ -0.46
NUP50-201ENST00000347635 PMCHL2Q9BQD1 86 aa12.16□□□□□ -0.46
NUP50-201ENST00000347635 TMUB1Q9BVT8 246 aa12.16□□□□□ -0.46
NUP50-201ENST00000347635 SSBP4Q9BWG4 385 aaPredicted RBP12.16□□□□□ -0.46
NUP50-201ENST00000347635 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.16□□□□□ -0.46
NUP50-201ENST00000347635 CKS2P33552 79 aa12.16□□□□□ -0.46
NUP50-201ENST00000347635 SRRM5B3KS81 715 aa12.16□□□□□ -0.46
NUP50-201ENST00000347635 FCGR2BP31994 310 aaPredicted RBP12.16□□□□□ -0.46
NUP50-201ENST00000347635 GNG5P63218 68 aa12.16□□□□□ -0.46
NUP50-201ENST00000347635 HAPLN4Q86UW8 402 aa12.16□□□□□ -0.46
NUP50-201ENST00000347635 PYYP10082 97 aa12.15□□□□□ -0.46
NUP50-201ENST00000347635 RNFT1Q5M7Z0 435 aa12.15□□□□□ -0.46
NUP50-201ENST00000347635 EREGO14944 169 aa12.15□□□□□ -0.46
NUP50-201ENST00000347635 ST6GALNAC6Q969X2 333 aa12.15□□□□□ -0.46
NUP50-201ENST00000347635 GPR82Q96P67 336 aa12.15□□□□□ -0.46
NUP50-201ENST00000347635 IGKV1D-33P01593 117 aa12.15□□□□□ -0.46
NUP50-201ENST00000347635 IGKV1-33P01594 117 aa12.15□□□□□ -0.46
NUP50-201ENST00000347635 ARF6P62330 175 aa12.15□□□□□ -0.46
NUP50-201ENST00000347635 CRIM1Q9NZV1 1036 aa12.15□□□□□ -0.46
NUP50-201ENST00000347635 ZNF257Q9Y2Q1 563 aa12.15□□□□□ -0.46
NUP50-201ENST00000347635 AREGP15514 252 aa12.15□□□□□ -0.46
NUP50-201ENST00000347635 CA1P00915 261 aaPredicted RBP12.14□□□□□ -0.47
NUP50-201ENST00000347635 TRAV9-2A0A087WT02 112 aa12.14□□□□□ -0.47
NUP50-201ENST00000347635 MRPL52Q86TS9 123 aaKnown RBP12.14□□□□□ -0.47
NUP50-201ENST00000347635 AP5S1Q9NUS5 200 aa12.14□□□□□ -0.47
NUP50-201ENST00000347635 HILPDAQ9Y5L2 63 aa12.14□□□□□ -0.47
NUP50-201ENST00000347635 TCRBV4S1A1TA0A5B7 111 aa12.14□□□□□ -0.47
NUP50-201ENST00000347635 PSG9Q00887 426 aa12.14□□□□□ -0.47
NUP50-201ENST00000347635 RBPMS2Q6ZRY4 209 aaKnown RBP12.14□□□□□ -0.47
NUP50-201ENST00000347635 MYOZ3Q8TDC0 251 aa12.14□□□□□ -0.47
NUP50-201ENST00000347635 TYMSP04818 313 aa12.14□□□□□ -0.47
NUP50-201ENST00000347635 Q9H3A6 140 aa12.14□□□□□ -0.47
NUP50-201ENST00000347635 MLNRO43193 412 aa12.14□□□□□ -0.47
NUP50-201ENST00000347635 FAM168AQ92567 244 aa12.14□□□□□ -0.47
NUP50-201ENST00000347635 POLR3KQ9Y2Y1 108 aaPredicted RBP12.14□□□□□ -0.47
NUP50-201ENST00000347635 SLC25A15Q9Y619 301 aa12.14□□□□□ -0.47
NUP50-201ENST00000347635 APC2O95996 2303 aa12.13□□□□□ -0.47
NUP50-201ENST00000347635 ZNF503-AS2A6NEH8 195 aa12.13□□□□□ -0.47
NUP50-201ENST00000347635 Q8NFD4 153 aa12.13□□□□□ -0.47
NUP50-201ENST00000347635 EPDR1Q9UM22 224 aa12.13□□□□□ -0.47
NUP50-201ENST00000347635 TRAV30A0A087WSZ9 112 aa12.13□□□□□ -0.47
NUP50-201ENST00000347635 C2orf83Q53S99 150 aa12.13□□□□□ -0.47
NUP50-201ENST00000347635 TRAV5A0A0B4J249 113 aa12.13□□□□□ -0.47
NUP50-201ENST00000347635 TFPI2P48307 235 aa12.13□□□□□ -0.47
NUP50-201ENST00000347635 RPS20P60866 119 aaKnown RBP12.13□□□□□ -0.47
NUP50-201ENST00000347635 DLEU1O43261 78 aa12.13□□□□□ -0.47
NUP50-201ENST00000347635 TDGF1P3P51864 188 aa12.13□□□□□ -0.47
NUP50-201ENST00000347635 SRSF6Q13247 344 aaKnown RBP12.13□□□□□ -0.47
NUP50-201ENST00000347635 NUP37Q8NFH4 326 aa12.13□□□□□ -0.47
NUP50-201ENST00000347635 DSCR9P59020 149 aa12.12□□□□□ -0.47
NUP50-201ENST00000347635 CDPF1Q6NVV7 123 aa12.12□□□□□ -0.47
NUP50-201ENST00000347635 TCF24Q7RTU0 167 aa12.12□□□□□ -0.47
NUP50-201ENST00000347635 TSKUQ8WUA8 353 aa12.12□□□□□ -0.47
NUP50-201ENST00000347635 OR10W1Q8NGF6 305 aa12.12□□□□□ -0.47
NUP50-201ENST00000347635 APOHP02749 345 aaPredicted RBP12.12□□□□□ -0.47
NUP50-201ENST00000347635 A0A1B0GUT8 65 aa12.12□□□□□ -0.47
NUP50-201ENST00000347635 NUDT3O95989 172 aa12.12□□□□□ -0.47
NUP50-201ENST00000347635 CCL3L1P16619 93 aa12.12□□□□□ -0.47
NUP50-201ENST00000347635 MFAP4P55083 255 aa12.12□□□□□ -0.47
NUP50-201ENST00000347635 CX3CL1P78423 397 aa12.12□□□□□ -0.47
NUP50-201ENST00000347635 CLEC5AQ9NY25 188 aa12.12□□□□□ -0.47
NUP50-201ENST00000347635 MAP1LC3AQ9H492 121 aa12.11□□□□□ -0.47
NUP50-201ENST00000347635 PEF1Q9UBV8 284 aaKnown RBP12.11□□□□□ -0.47
NUP50-201ENST00000347635 DKK1O94907 266 aa12.11□□□□□ -0.47
NUP50-201ENST00000347635 CD33P20138 364 aa12.11□□□□□ -0.47
NUP50-201ENST00000347635 WDR86Q86TI4 376 aa12.11□□□□□ -0.47
NUP50-201ENST00000347635 NUDT10Q8NFP7 164 aa12.11□□□□□ -0.47
NUP50-201ENST00000347635 NUDT11Q96G61 164 aa12.11□□□□□ -0.47
NUP50-201ENST00000347635 TPRP12270 2363 aaKnown RBP12.11□□□□□ -0.47
NUP50-201ENST00000347635 CACNA1HO95180 2353 aa12.11□□□□□ -0.47
NUP50-201ENST00000347635 A0A0G2JNJ9 132 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms