RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 LINC00854A0A1B0GVQ3 168 aa11.9□□□□□ -0.5
TSPAN4-201ENST00000346501 ZNF785A8K8V0 405 aa11.9□□□□□ -0.5
TSPAN4-201ENST00000346501 SCAF4O95104 1147 aaKnown RBP11.9□□□□□ -0.5
TSPAN4-201ENST00000346501 IFNA10P01566 189 aa11.9□□□□□ -0.5
TSPAN4-201ENST00000346501 IGHV3-48P01763 117 aa11.9□□□□□ -0.5
TSPAN4-201ENST00000346501 ADMP35318 185 aa11.9□□□□□ -0.5
TSPAN4-201ENST00000346501 SUPT4H1P63272 117 aaKnown RBP11.9□□□□□ -0.5
TSPAN4-201ENST00000346501 CNPY1Q3B7I2 92 aa11.9□□□□□ -0.5
TSPAN4-201ENST00000346501 ZNF600Q6ZNG1 722 aa11.9□□□□□ -0.5
TSPAN4-201ENST00000346501 SBSPONQ8IVN8 264 aa11.9□□□□□ -0.5
TSPAN4-201ENST00000346501 RNASEH2CQ8TDP1 164 aaKnown RBP11.9□□□□□ -0.5
TSPAN4-201ENST00000346501 PRR13Q9NZ81 148 aa11.9□□□□□ -0.5
TSPAN4-201ENST00000346501 TRAV14DV4A0A0A6YYC5 116 aa11.89□□□□□ -0.51
TSPAN4-201ENST00000346501 OR11H12B2RN74 326 aa11.89□□□□□ -0.51
TSPAN4-201ENST00000346501 F8W735 103 aaPredicted RBP11.89□□□□□ -0.51
TSPAN4-201ENST00000346501 MED6O75586 246 aa11.89□□□□□ -0.51
TSPAN4-201ENST00000346501 NXPH3O95157 252 aa11.89□□□□□ -0.51
TSPAN4-201ENST00000346501 SFT2D2O95562 160 aa11.89□□□□□ -0.51
TSPAN4-201ENST00000346501 CD5P06127 495 aa11.89□□□□□ -0.51
TSPAN4-201ENST00000346501 SLC25A4P12235 298 aa11.89□□□□□ -0.51
TSPAN4-201ENST00000346501 NPY1RP25929 384 aa11.89□□□□□ -0.51
TSPAN4-201ENST00000346501 ATP5IP56385 69 aaPredicted RBP11.89□□□□□ -0.51
TSPAN4-201ENST00000346501 TNFRSF9Q07011 255 aa11.89□□□□□ -0.51
TSPAN4-201ENST00000346501 BAK1Q16611 211 aa11.89□□□□□ -0.51
TSPAN4-201ENST00000346501 C2orf83Q53S99 150 aa11.89□□□□□ -0.51
TSPAN4-201ENST00000346501 NMSQ5H8A3 153 aa11.89□□□□□ -0.51
TSPAN4-201ENST00000346501 DTD1Q8TEA8 209 aa11.89□□□□□ -0.51
TSPAN4-201ENST00000346501 NARS2Q96I59 477 aaKnown RBP11.89□□□□□ -0.51
TSPAN4-201ENST00000346501 SPAG8Q99932 426 aaPredicted RBP11.89□□□□□ -0.51
TSPAN4-201ENST00000346501 C19orf73Q9NVV2 129 aa11.89□□□□□ -0.51
TSPAN4-201ENST00000346501 TMED3Q9Y3Q3 217 aa11.89□□□□□ -0.51
TSPAN4-201ENST00000346501 U3KQ87 197 aa11.89□□□□□ -0.51
TSPAN4-201ENST00000346501 OR4C46A6NHA9 309 aa11.88□□□□□ -0.51
TSPAN4-201ENST00000346501 ZNF207O43670 478 aaKnown RBP11.88□□□□□ -0.51
TSPAN4-201ENST00000346501 CLN5O75503 358 aa11.88□□□□□ -0.51
TSPAN4-201ENST00000346501 TMEM50AO95807 157 aa11.88□□□□□ -0.51
TSPAN4-201ENST00000346501 EDN2P20800 178 aa11.88□□□□□ -0.51
TSPAN4-201ENST00000346501 BSXQ3C1V8 233 aa11.88□□□□□ -0.51
TSPAN4-201ENST00000346501 PVRIGQ6DKI7 326 aa11.88□□□□□ -0.51
TSPAN4-201ENST00000346501 LRTM2Q8N967 370 aa11.88□□□□□ -0.51
TSPAN4-201ENST00000346501 TMEM116Q8NCL8 245 aa11.88□□□□□ -0.51
TSPAN4-201ENST00000346501 OR4X1Q8NH49 305 aa11.88□□□□□ -0.51
TSPAN4-201ENST00000346501 TMEM231Q9H6L2 316 aa11.88□□□□□ -0.51
TSPAN4-201ENST00000346501 HSPB7Q9UBY9 170 aa11.88□□□□□ -0.51
TSPAN4-201ENST00000346501 IGHV3OR16-8A0A075B7F1 116 aa11.87□□□□□ -0.51
TSPAN4-201ENST00000346501 NDUFB6O95139 128 aa11.87□□□□□ -0.51
TSPAN4-201ENST00000346501 IFNA21P01568 189 aa11.87□□□□□ -0.51
TSPAN4-201ENST00000346501 IFNA4P05014 189 aa11.87□□□□□ -0.51
TSPAN4-201ENST00000346501 CD7P09564 240 aa11.87□□□□□ -0.51
TSPAN4-201ENST00000346501 SLC25A6P12236 298 aa11.87□□□□□ -0.51
TSPAN4-201ENST00000346501 IL7P13232 177 aa11.87□□□□□ -0.51
TSPAN4-201ENST00000346501 PAFAH1B2P68402 229 aa11.87□□□□□ -0.51
TSPAN4-201ENST00000346501 RPP30P78346 268 aaKnown RBP11.87□□□□□ -0.51
TSPAN4-201ENST00000346501 PPP1R1AQ13522 171 aa11.87□□□□□ -0.51
TSPAN4-201ENST00000346501 COQ8AQ8NI60 647 aa11.87□□□□□ -0.51
TSPAN4-201ENST00000346501 RCHY1Q96PM5 261 aa11.87□□□□□ -0.51
TSPAN4-201ENST00000346501 SPATA25Q9BR10 227 aa11.87□□□□□ -0.51
TSPAN4-201ENST00000346501 SMPXQ9UHP9 88 aa11.87□□□□□ -0.51
TSPAN4-201ENST00000346501 IGHV7-4-1A0A0J9YVY3 117 aa11.86□□□□□ -0.51
TSPAN4-201ENST00000346501 A0A1W2PS18 150 aa11.86□□□□□ -0.51
TSPAN4-201ENST00000346501 FAM90A26D6RGX4 464 aa11.86□□□□□ -0.51
TSPAN4-201ENST00000346501 TSPAN4O14817 238 aa11.86□□□□□ -0.51
TSPAN4-201ENST00000346501 CMC4P56277 68 aaPredicted RBP11.86□□□□□ -0.51
TSPAN4-201ENST00000346501 RAB11AP62491 216 aa11.86□□□□□ -0.51
TSPAN4-201ENST00000346501 LINC00299Q6ZSB3 139 aa11.86□□□□□ -0.51
TSPAN4-201ENST00000346501 OR10C1Q96KK4 312 aa11.86□□□□□ -0.51
TSPAN4-201ENST00000346501 CIB3Q96Q77 187 aaPredicted RBP11.86□□□□□ -0.51
TSPAN4-201ENST00000346501 RHPN1-AS1Q9BWJ2 59 aa11.86□□□□□ -0.51
TSPAN4-201ENST00000346501 RBKSQ9H477 322 aa11.86□□□□□ -0.51
TSPAN4-201ENST00000346501 SRD5A3Q9H8P0 318 aa11.86□□□□□ -0.51
TSPAN4-201ENST00000346501 PUS1Q9Y606 427 aaKnown RBP eCLIP11.86□□□□□ -0.51
TSPAN4-201ENST00000346501 SELENOKQ9Y6D0 94 aa11.86□□□□□ -0.51
TSPAN4-201ENST00000346501 DNAH3Q8TD57 4116 aa11.86□□□□□ -0.51
TSPAN4-201ENST00000346501 HOXB5P09067 269 aa11.85□□□□□ -0.51
TSPAN4-201ENST00000346501 NPPCP23582 126 aa11.85□□□□□ -0.51
TSPAN4-201ENST00000346501 C4orf46Q504U0 113 aa11.85□□□□□ -0.51
TSPAN4-201ENST00000346501 TOMM20LQ6UXN7 152 aa11.85□□□□□ -0.51
TSPAN4-201ENST00000346501 DEFB125Q8N687 156 aa11.85□□□□□ -0.51
TSPAN4-201ENST00000346501 Q8WTZ3 238 aa11.85□□□□□ -0.51
TSPAN4-201ENST00000346501 S100ZQ8WXG8 99 aa11.85□□□□□ -0.51
TSPAN4-201ENST00000346501 METTL26Q96S19 204 aa11.85□□□□□ -0.51
TSPAN4-201ENST00000346501 FNDC4Q9H6D8 234 aaPredicted RBP11.85□□□□□ -0.51
TSPAN4-201ENST00000346501 RND2P52198 227 aa11.84□□□□□ -0.51
TSPAN4-201ENST00000346501 OR1S2Q8NGQ3 325 aa11.84□□□□□ -0.51
TSPAN4-201ENST00000346501 GRAMD2BQ96HH9 432 aa11.84□□□□□ -0.51
TSPAN4-201ENST00000346501 CCDC32Q9BV29 185 aa11.84□□□□□ -0.51
TSPAN4-201ENST00000346501 PAIP2BQ9ULR5 123 aaKnown RBP11.84□□□□□ -0.51
TSPAN4-201ENST00000346501 C9orf170A2RU37 121 aa11.83□□□□□ -0.52
TSPAN4-201ENST00000346501 WRBO00258 174 aa11.83□□□□□ -0.52
TSPAN4-201ENST00000346501 CHEK1O14757 476 aa11.83□□□□□ -0.52
TSPAN4-201ENST00000346501 FABP1P07148 127 aa11.83□□□□□ -0.52
TSPAN4-201ENST00000346501 OR4E1P0C645 316 aa11.83□□□□□ -0.52
TSPAN4-201ENST00000346501 OR10J1P30954 320 aa11.83□□□□□ -0.52
TSPAN4-201ENST00000346501 EIF2B2P49770 351 aaKnown RBP11.83□□□□□ -0.52
TSPAN4-201ENST00000346501 RPL11P62913 178 aaKnown RBP11.83□□□□□ -0.52
TSPAN4-201ENST00000346501 HAGHQ16775 308 aa11.83□□□□□ -0.52
TSPAN4-201ENST00000346501 LYG2Q86SG7 212 aa11.83□□□□□ -0.52
TSPAN4-201ENST00000346501 ACY3Q96HD9 319 aa11.83□□□□□ -0.52
TSPAN4-201ENST00000346501 SLC35E1Q96K37 410 aa11.83□□□□□ -0.52
TSPAN4-201ENST00000346501 SDHCQ99643 169 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms