RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 APCP25054 2843 aa16.96■□□□□ 0.31
TSPAN3-202ENST00000346495 CENPEQ02224 2701 aa16.96■□□□□ 0.31
TSPAN3-202ENST00000346495 A6NDX4 124 aa16.96■□□□□ 0.3
TSPAN3-202ENST00000346495 FSHBP01225 129 aa16.96■□□□□ 0.3
TSPAN3-202ENST00000346495 LINC00869P0C866 280 aa16.96■□□□□ 0.3
TSPAN3-202ENST00000346495 EGR2P11161 476 aaPredicted RBP16.96■□□□□ 0.3
TSPAN3-202ENST00000346495 RND2P52198 227 aa16.96■□□□□ 0.3
TSPAN3-202ENST00000346495 CYP2G1PQ6ZSU1 146 aa16.96■□□□□ 0.3
TSPAN3-202ENST00000346495 SCRT1Q9BWW7 348 aa16.96■□□□□ 0.3
TSPAN3-202ENST00000346495 EIF5A2Q9GZV4 153 aaKnown RBP16.96■□□□□ 0.3
TSPAN3-202ENST00000346495 PITPNC1Q9UKF7 332 aa16.96■□□□□ 0.3
TSPAN3-202ENST00000346495 NAV2Q8IVL1 2488 aa16.95■□□□□ 0.3
TSPAN3-202ENST00000346495 ABCA12Q86UK0 2595 aa16.95■□□□□ 0.3
TSPAN3-202ENST00000346495 VPS13CQ709C8 3753 aa16.95■□□□□ 0.3
TSPAN3-202ENST00000346495 PRRC2AP48634 2157 aaKnown RBP16.95■□□□□ 0.3
TSPAN3-202ENST00000346495 A0A1W2PPV4 95 aa16.95■□□□□ 0.3
TSPAN3-202ENST00000346495 TMEM218A2RU14 115 aa16.95■□□□□ 0.3
TSPAN3-202ENST00000346495 I3L2K1 104 aa16.95■□□□□ 0.3
TSPAN3-202ENST00000346495 IGHV3-48P01763 117 aa16.95■□□□□ 0.3
TSPAN3-202ENST00000346495 TMEM116Q8NCL8 245 aa16.95■□□□□ 0.3
TSPAN3-202ENST00000346495 SGMS2Q8NHU3 365 aa16.95■□□□□ 0.3
TSPAN3-202ENST00000346495 RAB24Q969Q5 203 aa16.95■□□□□ 0.3
TSPAN3-202ENST00000346495 MRPL36Q9P0J6 103 aaKnown RBP16.95■□□□□ 0.3
TSPAN3-202ENST00000346495 HELZ2Q9BYK8 2649 aaKnown RBP16.95■□□□□ 0.3
TSPAN3-202ENST00000346495 ZFP92A6NM28 416 aa16.94■□□□□ 0.3
TSPAN3-202ENST00000346495 FGF8P55075 233 aaPredicted RBP16.94■□□□□ 0.3
TSPAN3-202ENST00000346495 GCSAMLQ5JQS6 135 aa16.94■□□□□ 0.3
TSPAN3-202ENST00000346495 TCRBV4S1A1TA0A5B7 111 aa16.93■□□□□ 0.3
TSPAN3-202ENST00000346495 RBFOX3A6NFN3 312 aa16.93■□□□□ 0.3
TSPAN3-202ENST00000346495 TMEM68Q96MH6 324 aa16.93■□□□□ 0.3
TSPAN3-202ENST00000346495 SMDT1Q9H4I9 107 aa16.93■□□□□ 0.3
TSPAN3-202ENST00000346495 IGKV1D-37A0A075B6S9 117 aa16.92■□□□□ 0.3
TSPAN3-202ENST00000346495 M0QZK8 103 aa16.92■□□□□ 0.3
TSPAN3-202ENST00000346495 ATP6V0E1O15342 81 aa16.92■□□□□ 0.3
TSPAN3-202ENST00000346495 SELENOTP62341 195 aa16.92■□□□□ 0.3
TSPAN3-202ENST00000346495 LY6EQ16553 131 aa16.92■□□□□ 0.3
TSPAN3-202ENST00000346495 C16orf82Q7Z2V1 217 aa16.92■□□□□ 0.3
TSPAN3-202ENST00000346495 CSMD2Q7Z408 3487 aa16.92■□□□□ 0.3
TSPAN3-202ENST00000346495 IGLV11-55A0A075B6I3 123 aa16.92■□□□□ 0.3
TSPAN3-202ENST00000346495 IGHV3-21A0A0B4J1V1 117 aa16.92■□□□□ 0.3
TSPAN3-202ENST00000346495 RHOBP62745 196 aa16.92■□□□□ 0.3
TSPAN3-202ENST00000346495 DEFB112Q30KQ8 113 aa16.92■□□□□ 0.3
TSPAN3-202ENST00000346495 C9orf139Q6ZV77 190 aa16.92■□□□□ 0.3
TSPAN3-202ENST00000346495 TRGV9Q99603 122 aa16.92■□□□□ 0.3
TSPAN3-202ENST00000346495 K7EIM0 57 aa16.91■□□□□ 0.3
TSPAN3-202ENST00000346495 HMGB3O15347 200 aaKnown RBP16.91■□□□□ 0.3
TSPAN3-202ENST00000346495 AMY1AP04745 511 aa16.91■□□□□ 0.3
TSPAN3-202ENST00000346495 PMS2P11Q13670 270 aa16.91■□□□□ 0.3
TSPAN3-202ENST00000346495 UNQ5815/PRO19632Q6UWF5 114 aa16.91■□□□□ 0.3
TSPAN3-202ENST00000346495 BCL6BQ8N143 479 aaPredicted RBP16.91■□□□□ 0.3
TSPAN3-202ENST00000346495 OR4X1Q8NH49 305 aa16.91■□□□□ 0.3
TSPAN3-202ENST00000346495 FAM110DQ8TAY7 271 aaPredicted RBP16.91■□□□□ 0.3
TSPAN3-202ENST00000346495 FANCD2OSQ96PS1 177 aa16.91■□□□□ 0.3
TSPAN3-202ENST00000346495 C19orf24Q9BVV8 132 aa16.91■□□□□ 0.3
TSPAN3-202ENST00000346495 TNFRSF19Q9NS68 423 aa16.91■□□□□ 0.3
TSPAN3-202ENST00000346495 THYN1Q9P016 225 aa16.91■□□□□ 0.3
TSPAN3-202ENST00000346495 GNG13Q9P2W3 67 aa16.91■□□□□ 0.3
TSPAN3-202ENST00000346495 MDFIC2A0A1B0GVS7 189 aa16.9■□□□□ 0.3
TSPAN3-202ENST00000346495 EIF3GO75821 320 aaKnown RBP eCLIP16.9■□□□□ 0.3
TSPAN3-202ENST00000346495 IFNA1P01562 189 aa16.9■□□□□ 0.3
TSPAN3-202ENST00000346495 GATA2P23769 480 aaPredicted RBP16.9■□□□□ 0.3
TSPAN3-202ENST00000346495 HAGHQ16775 308 aa16.9■□□□□ 0.3
TSPAN3-202ENST00000346495 ZNF506Q5JVG8 444 aa16.9■□□□□ 0.3
TSPAN3-202ENST00000346495 CIARTQ8N365 385 aaPredicted RBP16.9■□□□□ 0.3
TSPAN3-202ENST00000346495 OR5T1Q8NG75 326 aa16.9■□□□□ 0.3
TSPAN3-202ENST00000346495 TMUB1Q9BVT8 246 aa16.9■□□□□ 0.3
TSPAN3-202ENST00000346495 SH2D7A6NKC9 451 aaPredicted RBP16.89■□□□□ 0.29
TSPAN3-202ENST00000346495 HIST1H1BP16401 226 aaKnown RBP16.89■□□□□ 0.29
TSPAN3-202ENST00000346495 ECSCRQ19T08 205 aa16.89■□□□□ 0.29
TSPAN3-202ENST00000346495 RARRES2Q99969 163 aa16.89■□□□□ 0.29
TSPAN3-202ENST00000346495 C9JQL5 133 aa16.88■□□□□ 0.29
TSPAN3-202ENST00000346495 F8W036 122 aa16.88■□□□□ 0.29
TSPAN3-202ENST00000346495 SFTA3P0C7M3 94 aa16.88■□□□□ 0.29
TSPAN3-202ENST00000346495 ZNF90Q03938 601 aa16.88■□□□□ 0.29
TSPAN3-202ENST00000346495 AKIRIN2Q53H80 203 aa16.88■□□□□ 0.29
TSPAN3-202ENST00000346495 KHDC3LQ587J8 217 aa16.88■□□□□ 0.29
TSPAN3-202ENST00000346495 TEX29Q8N6K0 151 aa16.88■□□□□ 0.29
TSPAN3-202ENST00000346495 LOC102723971A0A1B0GUV8 181 aa16.88■□□□□ 0.29
TSPAN3-202ENST00000346495 SMAD7O15105 426 aaKnown RBP16.88■□□□□ 0.29
TSPAN3-202ENST00000346495 CRIP2P52943 208 aaPredicted RBP16.88■□□□□ 0.29
TSPAN3-202ENST00000346495 RBMS3Q6XE24 437 aaKnown RBP16.88■□□□□ 0.29
TSPAN3-202ENST00000346495 SEC11CQ9BY50 192 aa16.88■□□□□ 0.29
TSPAN3-202ENST00000346495 LINC01548A6NM66 108 aa16.87■□□□□ 0.29
TSPAN3-202ENST00000346495 CLN5O75503 358 aa16.87■□□□□ 0.29
TSPAN3-202ENST00000346495 STAG3L2P0CL84 134 aa16.87■□□□□ 0.29
TSPAN3-202ENST00000346495 STAG3L3P0CL85 134 aa16.87■□□□□ 0.29
TSPAN3-202ENST00000346495 BCL2P10415 239 aa16.87■□□□□ 0.29
TSPAN3-202ENST00000346495 PPT1P50897 306 aa16.87■□□□□ 0.29
TSPAN3-202ENST00000346495 ICAM4Q14773 271 aa16.87■□□□□ 0.29
TSPAN3-202ENST00000346495 KLK9Q2XQG4 91 aa16.87■□□□□ 0.29
TSPAN3-202ENST00000346495 C10orf91Q5T1B1 145 aa16.87■□□□□ 0.29
TSPAN3-202ENST00000346495 SLC35E3Q7Z769 313 aa16.87■□□□□ 0.29
TSPAN3-202ENST00000346495 OR1L4Q8NGR5 311 aa16.87■□□□□ 0.29
TSPAN3-202ENST00000346495 OR5R1Q8NH85 324 aa16.87■□□□□ 0.29
TSPAN3-202ENST00000346495 GATAD1Q8WUU5 269 aa16.87■□□□□ 0.29
TSPAN3-202ENST00000346495 RNF2Q99496 336 aa16.87■□□□□ 0.29
TSPAN3-202ENST00000346495 SEPSECSQ9HD40 501 aaKnown RBP16.87■□□□□ 0.29
TSPAN3-202ENST00000346495 KLK9Q9UKQ9 250 aa16.87■□□□□ 0.29
TSPAN3-202ENST00000346495 CXorf1O96002 111 aa16.86■□□□□ 0.29
TSPAN3-202ENST00000346495 HSPB1P04792 205 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms